Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p30820 Brassica napus HOM05D003697 ORTHO05D005452 1.8e-43 178.7 82 100.0
C06p45330 Brassica napus HOM05D003697 ORTHO05D005452 5.6e-29 130.6 68 86.8
FAN13G1565 Fragaria x ananassa HOM05D003697 ORTHO05D024366 8.4e-25 116.7 56 87.5
BcaB03g14879 Brassica carinata HOM05D003697 ORTHO05D005452 3.2e-24 114.8 54 92.6
BcaC08g46557 Brassica carinata HOM05D003697 ORTHO05D005452 3.2e-24 114.8 54 92.6
Carub.0002s1810 Capsella rubella HOM05D003697 ORTHO05D005452 3.2e-24 114.8 54 92.6
CARHR064520 Cardamine hirsuta HOM05D003697 ORTHO05D005452 3.2e-24 114.8 54 92.6
Thhalv10018004m.g Eutrema salsugineum HOM05D003697 ORTHO05D005452 3.2e-24 114.8 54 92.6
QL02p099301 Quercus lobata HOM05D003697 ORTHO05D005452 4.2e-24 114.4 53 90.6
Sp5g26380 Schrenkiella parvula HOM05D003697 ORTHO05D005452 4.2e-24 114.4 54 92.6
Actinidia06460 Actinidia chinensis HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Actinidia26154 Actinidia chinensis HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
AL2G30830 Arabidopsis lyrata HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
AT1G71220 Arabidopsis thaliana HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
CSS0042528 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
CAN.G798.13 Capsicum annuum HOM05D003697 ORTHO05D005452 7.1e-24 113.6 53 90.6
Ca_00071_v3 Cicer arietinum L. HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Ciclev10000024m.g Citrus clementina HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
COL.COLO4_11778 Corchorus olitorius HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
MELO3C019456.2 Cucumis melo HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
ECA240G1790 Erigeron canadensis HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
FvH4_5g28990 Fragaria vesca HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
FAN08G0197 Fragaria x ananassa HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Gohir.A04G121300 Gossypium hirsutum HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Gohir.D04G163800 Gossypium hirsutum HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Gorai.012G151700 Gossypium raimondii HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
MD08G1235900 Malus domestica HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
MD15G1427500 Malus domestica HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Medtr2g006960 Medicago truncatula HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Nn1g08409 Nelumbo nucifera HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Psat1g220480 Pisum sativum HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Potri.003G018900 Populus trichocarpa HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Prupe.1G572000 Prunus persica HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Sabra03G0010400 Salix brachista HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Sed0005890 Sechium edule HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
TPR.G2085 Trifolium pratense HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
TAR381G0967 Trochodendron aralioides HOM05D003697 ORTHO05D005452 7.1e-24 113.6 54 90.7
Dinv24296 Davidia involucrata HOM05D003697 ORTHO05D005452 9.3e-24 113.2 56 85.7
Hma1.2p1_0217F.1_g092210 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 9.3e-24 113.2 56 85.7
VMungo0540G0442 Vigna mungo HOM05D003697 ORTHO05D005452 9.3e-24 113.2 55 89.1
A07p37570 Brassica napus HOM05D003697 ORTHO05D005452 1.6e-23 112.5 51 94.1
BolC6t39589H Brassica oleracea HOM05D003697 ORTHO05D005452 1.6e-23 112.5 51 94.1
BraA07t31318Z Brassica rapa HOM05D003697 ORTHO05D005452 1.6e-23 112.5 51 94.1
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 1.6e-23 112.5 54 88.9
DCAR_006698 Daucus carota HOM05D003697 ORTHO05D005452 1.6e-23 112.5 54 88.9
Lj5C253T9 Lonicera japonica HOM05D003697 ORTHO05D005452 1.6e-23 112.5 52 90.4
Os02g0664200 Oryza sativa ssp. japonica HOM05D003697 ORTHO05D005452 1.6e-23 112.5 54 88.9
RcHm_v2.0_Chr7g0221551 Rosa chinensis HOM05D003697 ORTHO05D005452 1.6e-23 112.5 54 88.9
HPP92_015204 Vanilla planifolia HOM05D003697 ORTHO05D005452 1.6e-23 112.5 54 88.9
Zm00001eb258320 Zea mays HOM05D003697 ORTHO05D005452 1.6e-23 112.5 54 88.9
Aa31LG4G9290 Aethionema arabicum HOM05D003697 ORTHO05D005452 2.1e-23 112.1 52 90.4
ClCG05G009590 Citrullus lanatus HOM05D003697 ORTHO05D005452 2.1e-23 112.1 52 90.4
CsaV3_3G019150 Cucumis sativus L. HOM05D003697 ORTHO05D005452 2.1e-23 112.1 54 88.9
FAN04G3000 Fragaria x ananassa HOM05D003697 ORTHO05D005452 2.1e-23 112.1 52 90.4
FAN18G2119 Fragaria x ananassa HOM05D003697 ORTHO05D005452 2.1e-23 112.1 52 90.4
THA.LOC104801984 Tarenaya hassleriana HOM05D003697 ORTHO05D005452 2.1e-23 112.1 54 88.9
Thecc.02G088500 Theobroma cacao HOM05D003697 ORTHO05D005452 2.1e-23 112.1 54 88.9
GSVIVG01022867001 Vitis vinifera HOM05D003697 ORTHO05D005452 2.1e-23 112.1 54 88.9
arahy.Tifrunner.gnm1.ann1.6LDV6M Arachis hypogaea HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
arahy.Tifrunner.gnm1.ann1.IR21Q7 Arachis hypogaea HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
Lsat_1_v5_gn_9_118481 Lactuca sativa HOM05D003697 ORTHO05D005452 2.7e-23 111.7 72 68.1
Lj6g0024422 Lotus japonicus HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
Lj6g0025593 Lotus japonicus HOM05D003697 ORTHO05D024366 2.7e-23 111.7 54 87.0
Lalb_Chr20g0123551 Lupinus albus HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 87.0
Manes.10G121900 Manihot esculenta HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
Nitab4.5_0000816g0140 Nicotiana tabacum HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
Peaxi162Scf00011g00526 Petunia axillaris HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
Phvul.006G215600 Phaseolus vulgaris HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
Solyc01g104040.4 Solanum lycopersicum HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
Sopen01g046450 Solanum pennellii HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
TWI14G0038 Tripterygium wilfordii HOM05D003697 ORTHO05D005452 2.7e-23 111.7 54 88.9
Aqoxy5G02635 Aquilegia oxysepala HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
MSTRG.20304 Avicennia marina HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Cfa005504 Carpinus fangiana HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Cc02_g22700 Coffea canephora HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Haze_01738 Corylus avellana HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
ECA233G0288 Erigeron canadensis HOM05D003697 ORTHO05D005452 3.5e-23 111.3 51 92.2
Migut.B00820 Erythranthe guttata HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Eucgr.I02739 Eucalyptus grandis HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Glyma.05G168600 Glycine max HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Glyma.08G127200 Glycine max HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Glyma.08G187500 Glycine max HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Gohir.A12G027900 Gossypium hirsutum HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Gohir.D12G027400 Gossypium hirsutum HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
Gorai.008G027900 Gossypium raimondii HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
HanXRQChr09g0249001 Helianthus annuus HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 87.0
Oeu027795.2 Olea europaea HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 88.9
PSO017G4515 Papaver somniferum HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 87.0
PSO170G2453 Papaver somniferum HOM05D003697 ORTHO05D005452 3.5e-23 111.3 54 87.0
AagrBONN_evm.TU.Sc2ySwM_362.2359 Anthoceros agrestis HOM05D003697 ORTHO05D005452 4.6e-23 110.9 53 88.7
Duzib132G0461 Durio zibethinus HOM05D003697 ORTHO05D005452 4.6e-23 110.9 54 88.9
SMO276G0030 Selaginella moellendorffii HOM05D003697 ORTHO05D005452 4.6e-23 110.9 54 87.0
Atru.chr3.1599 Acer truncatum HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
Atru.chr3.1607 Acer truncatum HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
Atru.chr6.584 Acer truncatum HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
Ah.04g162670 Amaranthus hybridus HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
ATR1136G197 Amborella trichopoda HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
EL10Ac4g08781 Beta vulgaris HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
CANSAT11G1101 Cannabis sativa HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
AUR62037329 Chenopodium quinoa HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
AUR62042597 Chenopodium quinoa HOM05D003697 ORTHO05D005452 6.0e-23 110.5 54 87.0
CiPaw.06G146300 Carya illinoinensis HOM05D003697 ORTHO05D005452 7.9e-23 110.2 54 88.9
Duzib248G1637 Durio zibethinus HOM05D003697 ORTHO05D005452 7.9e-23 110.2 54 87.0
Lalb_Chr13g0295701 Lupinus albus HOM05D003697 ORTHO05D005452 7.9e-23 110.2 54 87.0
Nitab4.5_0008466g0010 Nicotiana tabacum HOM05D003697 ORTHO05D005452 7.9e-23 110.2 54 87.0
SalBow7G4621 Salvia bowleyana HOM05D003697 ORTHO05D005452 7.9e-23 110.2 54 87.0
PGR142G1992 Punica granatum HOM05D003697 ORTHO05D005452 1.0e-22 109.8 54 87.0
SGA_v2.0_scaffold110G31335 Striga asiatica HOM05D003697 ORTHO05D005452 1.0e-22 109.8 52 88.5
Eucgr.H01580 Eucalyptus grandis HOM05D003697 ORTHO05D005452 1.3e-22 109.4 55 87.3
Hma1.2p1_0217F.1_g092200 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 1.3e-22 109.4 54 87.0
Pp3c3_14060 Physcomitrium patens HOM05D003697 ORTHO05D005452 1.3e-22 109.4 54 85.2
Eucgr.H01552 Eucalyptus grandis HOM05D003697 ORTHO05D005452 1.8e-22 109.0 54 87.0
vmacro19883 Vaccinium macrocarpon HOM05D003697 ORTHO05D005452 2.3e-22 108.6 55 83.6
Rhsim05G0119800 Rhododendron simsii HOM05D003697 ORTHO05D005452 3.0e-22 108.2 51 90.2
SEGI_03237 Sequoiadendron giganteum HOM05D003697 ORTHO05D005452 3.0e-22 108.2 54 85.2
CBR_g48619 Chara braunii HOM05D003697 ORTHO05D005452 6.7e-22 107.1 54 83.3
Mapoly0156s0022 Marchantia polymorpha HOM05D003697 ORTHO05D005452 6.7e-22 107.1 54 81.5
PRCOL_00004479 Prasinoderma coloniale HOM05D003697 ORTHO05D005452 6.7e-22 107.1 60 78.3
MCO01G725 Micromonas commoda HOM05D003697 ORTHO05D005452 4.3e-21 104.4 54 81.5
unitig_749.g14125 Utricularia gibba HOM05D003697 ORTHO05D005452 2.5e-16 88.6 42 88.1
Cfa024915 Carpinus fangiana HOM05D003697 ORTHO05D005452 7.1e-16 87.0 53 69.8
BraA07t30719Z Brassica rapa HOM05D003697 ORTHO05D005452 1.6e-12 75.9 51 70.6


User provided reference genes

Program Settings