Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 3.5e-49 198.0 101 100.0
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 3.0e-48 194.9 101 98.0
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 3.0e-48 194.9 101 98.0
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 6.7e-48 193.7 101 98.0
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 9.6e-47 189.9 98 98.0
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 3.1e-45 184.9 105 92.4
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 3.1e-45 184.9 105 92.4
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 3.4e-44 181.4 105 89.5
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 9.3e-42 173.3 106 87.7
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.2e-41 172.9 106 87.7
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 6.0e-41 170.6 106 86.8
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 6.0e-41 170.6 106 86.8
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 8.7e-40 166.8 105 86.7
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 8.7e-40 166.8 105 86.7
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 1.9e-39 165.6 105 85.7
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 2.4e-37 158.7 105 82.9
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 2.2e-35 152.1 103 83.5
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 6.7e-32 140.6 99 78.8
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.4e-26 122.9 103 66.0
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 3.2e-26 121.7 103 68.0
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 4.2e-26 121.3 107 67.3
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 9.4e-26 120.2 104 66.3
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 9.4e-26 120.2 103 66.0
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 7.9e-25 117.1 100 63.0
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.4e-24 116.3 103 62.1
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.4e-24 116.3 103 62.1
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 1.4e-24 116.3 103 62.1
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.8e-24 115.9 103 64.1
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 1.8e-24 115.9 103 61.2
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.8e-24 115.9 98 66.3
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 2.3e-24 115.5 100 62.0
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 5.1e-24 114.4 104 61.5
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 6.7e-24 114.0 103 61.2
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 8.8e-24 113.6 103 63.1
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 2.5e-23 112.1 103 62.1
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 4.3e-23 111.3 104 63.5
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 7.4e-23 110.5 103 59.2
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 7.4e-23 110.5 103 62.1
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 9.7e-23 110.2 104 62.5
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 1.3e-22 109.8 104 62.5
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.7e-22 109.4 103 63.1
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 2.2e-22 109.0 103 61.2
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 3.7e-22 108.2 103 61.2
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 3.7e-22 108.2 102 63.7
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 8.2e-22 107.1 104 60.6
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.1e-21 106.7 83 73.5
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.1e-21 106.7 104 60.6
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 1.4e-21 106.3 107 57.9
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.4e-21 106.3 103 58.3
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 2.4e-21 105.5 107 57.9
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.4e-21 105.5 103 58.3
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 2.4e-21 105.5 103 58.3
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 3.1e-21 105.1 100 59.0
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 3.1e-21 105.1 103 58.3
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 4.1e-21 104.8 100 60.0
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 4.1e-21 104.8 103 60.2
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 5.3e-21 104.4 104 59.6
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 5.3e-21 104.4 103 60.2
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 6.9e-21 104.0 100 58.0
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 9.1e-21 103.6 98 61.2
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.2e-20 103.2 100 58.0
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 2.0e-20 102.4 103 58.3
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 2.6e-20 102.1 100 57.0
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 2.6e-20 102.1 100 57.0
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 3.4e-20 101.7 103 57.3
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 5.9e-20 100.9 103 55.3
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 7.7e-20 100.5 99 58.6
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 7.7e-20 100.5 103 57.3
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 7.7e-20 100.5 104 58.7
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.7e-19 99.4 100 59.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 2.9e-19 98.6 104 58.7
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 2.9e-19 98.6 104 58.7
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 5.0e-19 97.8 105 58.1
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 6.5e-19 97.4 106 54.7
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 1.4e-18 96.3 99 58.6
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.9e-18 95.9 100 57.0
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 2.5e-18 95.5 93 61.3
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 2.5e-18 95.5 103 59.2
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 3.2e-18 95.1 97 57.7
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 5.5e-18 94.4 106 53.8
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 5.5e-18 94.4 103 57.3
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 7.2e-18 94.0 104 57.7
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 7.2e-18 94.0 105 59.0
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.6e-17 92.8 91 56.0
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 7.9e-17 90.5 105 53.3
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 7.9e-17 90.5 100 56.0
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 1.4e-16 89.7 103 56.3
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 3.9e-16 88.2 97 54.6
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 3.9e-16 88.2 106 53.8
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.5e-15 86.3 97 53.6
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 2.6e-15 85.5 100 53.0
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 3.3e-15 85.1 94 54.3
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 4.1e-13 78.2 90 53.3
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.5e-12 74.7 104 47.1
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 7.7e-12 73.9 65 63.1
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-10 70.1 65 61.5
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.5e-10 69.7 86 51.2
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 6.1e-09 64.3 88 50.0
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 8.8e-08 60.5 52 61.5


User provided reference genes

Program Settings