Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p30330 Brassica napus HOM05D004571 ORTHO05D005334 1.1e-47 193.0 96 100.0
BraA07t30670Z Brassica rapa HOM05D004571 ORTHO05D005334 1.3e-45 186.0 91 100.0
C06p46340 Brassica napus HOM05D004571 ORTHO05D005334 2.9e-37 158.3 88 88.6
BolC6t39679H Brassica oleracea HOM05D004571 ORTHO05D005334 2.9e-37 158.3 88 88.6
A07p38280 Brassica napus HOM05D004571 ORTHO05D005334 6.6e-37 157.1 91 85.7
BraA07t31392Z Brassica rapa HOM05D004571 ORTHO05D005334 1.2e-35 152.9 91 83.5
BcaB03g14960 Brassica carinata HOM05D004571 ORTHO05D005334 1.6e-35 152.5 98 78.6
BolC6t38614H Brassica oleracea HOM05D004571 ORTHO05D005334 8.0e-35 150.2 97 80.4
C06p35100 Brassica napus HOM05D004571 ORTHO05D005334 1.8e-34 149.1 97 80.4
Sp5g27250 Schrenkiella parvula HOM05D004571 ORTHO05D005334 6.8e-34 147.1 99 75.8
AT1G72170 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 5.8e-33 144.1 103 71.8
Carub.0002s1897 Capsella rubella HOM05D004571 ORTHO05D005334 9.8e-33 143.3 101 73.3
THA.LOC104800135 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 9.8e-33 143.3 78 85.9
CARHR065020 Cardamine hirsuta HOM05D004571 ORTHO05D005334 2.9e-32 141.7 100 71.0
Aa31LG4G8400 Aethionema arabicum HOM05D004571 ORTHO05D005334 3.7e-32 141.4 93 74.2
AL2G31830 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 4.9e-32 141.0 101 71.3
Glyma.06G325200 Glycine max HOM05D004571 ORTHO05D005334 5.4e-31 137.5 94 68.1
COL.COLO4_24652 Corchorus olitorius HOM05D004571 ORTHO05D005334 2.0e-30 135.6 78 79.5
AT1G22520 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 3.5e-30 134.8 99 71.7
Glyma.04G256400 Glycine max HOM05D004571 ORTHO05D005334 3.5e-30 134.8 95 65.3
THA.LOC104809727 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 3.5e-30 134.8 101 70.3
VMungo1080G1505 Vigna mungo HOM05D004571 ORTHO05D005334 4.6e-30 134.4 87 71.3
Aa31LG7G6430 Aethionema arabicum HOM05D004571 ORTHO05D005334 6.0e-30 134.0 94 73.4
Ciclev10002721m.g Citrus clementina HOM05D004571 ORTHO05D005334 1.3e-29 132.9 90 71.1
Carub.0001s2205 Capsella rubella HOM05D004571 ORTHO05D005334 1.7e-29 132.5 96 71.9
Phvul.005G000100 Phaseolus vulgaris HOM05D004571 ORTHO05D005334 2.3e-29 132.1 88 69.3
AL1G36060 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 3.0e-29 131.7 99 69.7
BcaC07g39167 Brassica carinata HOM05D004571 ORTHO05D005334 8.6e-29 130.2 103 69.9
Cpa.g.sc66.1 Carica papaya HOM05D004571 ORTHO05D005334 8.6e-29 130.2 75 78.7
Thhalv10019513m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 1.5e-28 129.4 95 67.4
Gorai.013G137900 Gossypium raimondii HOM05D004571 ORTHO05D005334 1.5e-28 129.4 95 66.3
MD08G1217900 Malus domestica HOM05D004571 ORTHO05D005334 1.5e-28 129.4 78 74.4
Thecc.08G192400 Theobroma cacao HOM05D004571 ORTHO05D005334 1.5e-28 129.4 87 69.0
Haze_21312 Corylus avellana HOM05D004571 ORTHO05D005334 1.9e-28 129.0 88 68.2
Prupe.1G555400 Prunus persica HOM05D004571 ORTHO05D005334 2.5e-28 128.6 88 67.0
C08p21600 Brassica napus HOM05D004571 ORTHO05D005334 3.3e-28 128.3 86 72.1
Ca_13497_v3 Cicer arietinum L. HOM05D004571 ORTHO05D005334 3.3e-28 128.3 95 62.1
Gohir.D13G122900 Gossypium hirsutum HOM05D004571 ORTHO05D005334 3.3e-28 128.3 95 65.3
Lj3g0024961 Lotus japonicus HOM05D004571 ORTHO05D005334 3.3e-28 128.3 95 64.2
Gohir.D13G123000 Gossypium hirsutum HOM05D004571 ORTHO05D005334 4.3e-28 127.9 95 65.3
CARHR022880 Cardamine hirsuta HOM05D004571 ORTHO05D005334 5.6e-28 127.5 92 71.7
BcaB03g11911 Brassica carinata HOM05D004571 ORTHO05D005334 7.3e-28 127.1 94 73.4
CiPaw.07G235800 Carya illinoinensis HOM05D004571 ORTHO05D005334 7.3e-28 127.1 88 67.0
Gohir.A13G119100 Gossypium hirsutum HOM05D004571 ORTHO05D005334 7.3e-28 127.1 95 64.2
Atru.chr13.2366 Acer truncatum HOM05D004571 ORTHO05D005334 9.5e-28 126.7 83 71.1
TPR.G25514 Trifolium pratense HOM05D004571 ORTHO05D005334 9.5e-28 126.7 78 71.8
TWI14G1164 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 9.5e-28 126.7 78 73.1
BolC8t49798H Brassica oleracea HOM05D004571 ORTHO05D005334 1.6e-27 125.9 90 75.6
MD15G1405800 Malus domestica HOM05D004571 ORTHO05D005334 1.6e-27 125.9 78 71.8
A08p28490 Brassica napus HOM05D004571 ORTHO05D005334 2.1e-27 125.6 79 75.9
BraA08t34777Z Brassica rapa HOM05D004571 ORTHO05D005334 2.8e-27 125.2 78 76.9
Gohir.A13G119200 Gossypium hirsutum HOM05D004571 ORTHO05D005334 2.8e-27 125.2 95 64.2
RcHm_v2.0_Chr7g0227581 Rosa chinensis HOM05D004571 ORTHO05D005334 3.6e-27 124.8 84 67.9
MELO3C022229.2 Cucumis melo HOM05D004571 ORTHO05D005334 4.7e-27 124.4 73 79.5
Thhalv10009192m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 4.7e-27 124.4 90 71.1
Medtr3g005050 Medicago truncatula HOM05D004571 ORTHO05D005334 4.7e-27 124.4 79 73.4
Sp1g20030 Schrenkiella parvula HOM05D004571 ORTHO05D005334 4.7e-27 124.4 90 70.0
CANSAT25G3741 Cannabis sativa HOM05D004571 ORTHO05D005334 8.0e-27 123.6 88 63.6
FAN13G1323 Fragaria x ananassa HOM05D004571 ORTHO05D005334 8.0e-27 123.6 84 69.0
BcaB03g14198 Brassica carinata HOM05D004571 ORTHO05D005334 1.1e-26 123.2 86 74.4
CsaV3_5G040560 Cucumis sativus L. HOM05D004571 ORTHO05D005334 1.1e-26 123.2 74 77.0
FAN04G0250 Fragaria x ananassa HOM05D004571 ORTHO05D005334 1.1e-26 123.2 84 67.9
FvH4_5g31700 Fragaria vesca HOM05D004571 ORTHO05D005334 1.4e-26 122.9 84 69.0
Psat1g003360 Pisum sativum HOM05D004571 ORTHO05D005334 1.4e-26 122.9 98 61.2
FAN18G0720 Fragaria x ananassa HOM05D004571 ORTHO05D005334 1.8e-26 122.5 84 67.9
CiPaw.08G002900 Carya illinoinensis HOM05D004571 ORTHO05D005334 2.3e-26 122.1 94 63.8
ClCG08G000160 Citrullus lanatus HOM05D004571 ORTHO05D005334 2.3e-26 122.1 85 71.8
ECA247G3605 Erigeron canadensis HOM05D004571 ORTHO05D005334 2.3e-26 122.1 76 71.1
ATR1136G048 Amborella trichopoda HOM05D004571 ORTHO05D005334 4.0e-26 121.3 78 74.4
TAR628G0297 Trochodendron aralioides HOM05D004571 ORTHO05D005334 4.0e-26 121.3 86 66.3
Hma1.2p1_0374F.1_g138460 Hydrangea macrophylla HOM05D004571 ORTHO05D005334 5.2e-26 120.9 88 64.8
TAR381G0940 Trochodendron aralioides HOM05D004571 ORTHO05D005334 5.2e-26 120.9 89 62.9
CDE08G1034 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 6.8e-26 120.6 95 61.1
Actinidia29414 Actinidia chinensis HOM05D004571 ORTHO05D005334 1.2e-25 119.8 88 67.0
DCAR_014081 Daucus carota HOM05D004571 ORTHO05D005334 1.2e-25 119.8 74 74.3
Manes.02G223200 Manihot esculenta HOM05D004571 ORTHO05D005334 1.2e-25 119.8 69 76.8
Rhsim11G0053000 Rhododendron simsii HOM05D004571 ORTHO05D005334 1.2e-25 119.8 86 66.3
CDE02G1838 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 1.5e-25 119.4 90 63.3
Dinv41758 Davidia involucrata HOM05D004571 ORTHO05D005334 1.5e-25 119.4 88 65.9
AUR62004601 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.0e-25 119.0 84 65.5
AUR62023543 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.0e-25 119.0 84 65.5
Migut.C01321 Erythranthe guttata HOM05D004571 ORTHO05D005334 2.0e-25 119.0 93 64.5
HanXRQChr02g0036591 Helianthus annuus HOM05D004571 ORTHO05D005334 2.0e-25 119.0 87 69.0
HanXRQChr04g0101791 Helianthus annuus HOM05D004571 ORTHO05D005334 3.4e-25 118.2 73 74.0
Ah.05g178570 Amaranthus hybridus HOM05D004571 ORTHO05D005334 4.4e-25 117.9 88 67.0
Hund27115 Selenicereus undatus HOM05D004571 ORTHO05D005334 4.4e-25 117.9 91 62.6
CANSAT56G3739 Cannabis sativa HOM05D004571 ORTHO05D005334 9.8e-25 116.7 88 60.2
Lsat_1_v5_gn_1_25881 Lactuca sativa HOM05D004571 ORTHO05D005334 9.8e-25 116.7 82 69.5
Duzib116G0804 Durio zibethinus HOM05D004571 ORTHO05D005334 1.3e-24 116.3 91 63.7
Oeu044957.1 Olea europaea HOM05D004571 ORTHO05D005334 1.7e-24 115.9 72 72.2
Potri.019G079101 Populus trichocarpa HOM05D004571 ORTHO05D005334 1.7e-24 115.9 85 67.1
GSVIVG01026083001 Vitis vinifera HOM05D004571 ORTHO05D005334 1.7e-24 115.9 78 67.9
Nn1g08340 Nelumbo nucifera HOM05D004571 ORTHO05D005334 2.2e-24 115.5 92 62.0
PGR042G2098 Punica granatum HOM05D004571 ORTHO05D005334 2.2e-24 115.5 76 65.8
Potri.013G105766 Populus trichocarpa HOM05D004571 ORTHO05D005334 3.7e-24 114.8 80 68.8
PSO017G1736 Papaver somniferum HOM05D004571 ORTHO05D005334 4.9e-24 114.4 74 70.3
PSO170G5138 Papaver somniferum HOM05D004571 ORTHO05D005334 4.9e-24 114.4 74 70.3
SalBow7G4145 Salvia bowleyana HOM05D004571 ORTHO05D005334 4.9e-24 114.4 87 58.6
Sc23g0001520 Simmondsia chinensis HOM05D004571 ORTHO05D005334 6.4e-24 114.0 79 68.4
QL02p026432 Quercus lobata HOM05D004571 ORTHO05D005334 8.3e-24 113.6 78 64.1
Sed0021715 Sechium edule HOM05D004571 ORTHO05D005334 1.4e-23 112.8 88 67.0
SGA_v2.0_scaffold24G10606 Striga asiatica HOM05D004571 ORTHO05D005334 1.4e-23 112.8 75 65.3
EL10Ac1g00135 Beta vulgaris HOM05D004571 ORTHO05D005334 1.9e-23 112.5 83 65.1
Sabra19G0089800 Salix brachista HOM05D004571 ORTHO05D005334 3.2e-23 111.7 72 70.8
Sabra13G0091300 Salix brachista HOM05D004571 ORTHO05D005334 5.4e-23 110.9 80 68.8
Zm00001eb063990 Zea mays HOM05D004571 ORTHO05D005334 5.4e-23 110.9 93 57.0
Actinidia03516 Actinidia chinensis HOM05D004571 ORTHO05D005334 7.1e-23 110.5 88 61.4
Nn5g27495 Nelumbo nucifera HOM05D004571 ORTHO05D005334 1.2e-22 109.8 73 64.4
A07p14330 Brassica napus HOM05D004571 ORTHO05D005334 1.6e-22 109.4 87 66.7
Aqoxy5G02645 Aquilegia oxysepala HOM05D004571 ORTHO05D005334 2.1e-22 109.0 102 55.9
CSS0010340 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 2.1e-22 109.0 96 58.3
MD17G1233400 Malus domestica HOM05D004571 ORTHO05D005334 2.7e-22 108.6 92 60.9
SalBow5G3518 Salvia bowleyana HOM05D002016 ORTHO05D002251 2.7e-22 108.6 93 53.8
Os03g0840900 Oryza sativa ssp. japonica HOM05D004571 ORTHO05D005334 3.5e-22 108.2 94 55.3
unitig_26.g9866 Utricularia gibba HOM05D004571 ORTHO05D005334 3.5e-22 108.2 71 67.6
BraA07t29189Z Brassica rapa HOM05D004571 ORTHO05D005334 4.6e-22 107.8 74 71.6
MBI16_g31756_MAGBIO Magnolia biondii HOM05D004571 ORTHO05D005334 4.6e-22 107.8 67 73.1
SEGI_09168 Sequoiadendron giganteum HOM05D004571 ORTHO05D005334 6.0e-22 107.5 95 56.8
PGSC0003DMG400025645 Solanum tuberosum HOM05D004571 ORTHO05D005334 6.0e-22 107.5 81 64.2
Solyc11g027870.2 Solanum lycopersicum HOM05D004571 ORTHO05D005334 3.0e-21 105.1 81 63.0
Sopen11g022630 Solanum pennellii HOM05D004571 ORTHO05D005334 3.0e-21 105.1 81 63.0
arahy.Tifrunner.gnm1.ann1.ET922W Arachis hypogaea HOM05D004571 ORTHO05D005334 5.1e-21 104.4 88 60.2
ECA246G2468 Erigeron canadensis HOM05D004571 ORTHO05D005334 6.6e-21 104.0 78 67.9
HPP92_012688 Vanilla planifolia HOM05D004571 ORTHO05D005334 8.6e-21 103.6 57 80.7
DCAR_017443 Daucus carota HOM05D004571 ORTHO05D005334 1.1e-20 103.2 63 73.0
arahy.Tifrunner.gnm1.ann1.Q0KDHL Arachis hypogaea HOM05D008831 ORTHO05D005334 2.5e-20 102.1 84 61.9
HanXRQChr13g0402341 Helianthus annuus HOM05D004571 ORTHO05D005334 2.5e-20 102.1 75 66.7
HPP92_012699 Vanilla planifolia HOM05D004571 ORTHO05D005334 2.5e-20 102.1 57 78.9
Zm00001eb211000 Zea mays HOM05D004571 ORTHO05D005334 3.3e-20 101.7 94 52.1
Nitab4.5_0001463g0030 Nicotiana tabacum HOM05D004571 ORTHO05D005334 5.6e-20 100.9 79 62.0
Nitab4.5_0005616g0050 Nicotiana tabacum HOM05D004571 ORTHO05D005334 5.6e-20 100.9 79 62.0
CANSAT80G2522 Cannabis sativa HOM05D004571 ORTHO05D005334 9.5e-20 100.1 80 62.5
HPP92_016944 Vanilla planifolia HOM05D004571 ORTHO05D005334 6.2e-19 97.4 76 63.2
C07p21100 Brassica napus HOM05D004571 ORTHO05D005334 4.0e-18 94.7 117 48.7
AagrBONN_evm.TU.Sc2ySwM_344.525 Anthoceros agrestis HOM05D004571 ORTHO05D005334 3.4e-17 91.7 89 55.1
Pp3c6_25110 Physcomitrium patens HOM05D004571 ORTHO05D005334 9.9e-17 90.1 65 64.6
Cc10_g09660 Coffea canephora HOM05D004571 ORTHO05D005334 1.3e-16 89.7 89 48.3
Pp3c5_3370 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.9e-16 88.6 65 63.1
SMO170G0007 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 4.9e-16 87.8 55 72.7
Peaxi162Scf00688g00440 Petunia axillaris HOM05D004571 ORTHO05D005334 6.4e-16 87.4 76 57.9
Mapoly0097s0059 Marchantia polymorpha HOM05D004571 ORTHO05D005334 8.3e-16 87.0 72 59.7
Peaxi162Scf00076g00210 Petunia axillaris HOM05D004571 ORTHO05D005334 1.1e-15 86.7 84 52.4
CBR_g28554 Chara braunii HOM05D004571 ORTHO05D005334 1.9e-15 85.9 89 52.8
PSO170G6605 Papaver somniferum HOM05D004571 ORTHO05D005334 1.9e-15 85.9 61 60.7
SalBow8G4375 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.9e-15 85.9 56 69.6
AagrBONN_evm.TU.Sc2ySwM_117.1227 Anthoceros agrestis HOM05D004571 ORTHO05D005334 3.2e-15 85.1 73 56.2
Pp3c16_13970 Physcomitrium patens HOM05D004571 ORTHO05D005334 5.4e-15 84.3 65 61.5
SalBow1G4736 Salvia bowleyana HOM05D004571 ORTHO05D005334 5.4e-15 84.3 56 67.9
SalBow7G3147 Salvia bowleyana HOM05D004571 ORTHO05D005334 7.1e-15 84.0 56 67.9
CSS0023243 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 3.0e-13 78.6 61 60.7
SMO356G0601 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 1.1e-12 76.6 63 52.4
SalBow1G5773 Salvia bowleyana HOM05D004571 ORTHO05D005334 2.5e-12 75.5 50 68.0
Gorai.013G138000 Gossypium raimondii HOM05D004571 ORTHO05D005334 4.3e-12 74.7 44 75.0
PRCOL_00006286 Prasinoderma coloniale HOM05D004571 ORTHO05D005334 4.0e-10 68.2 77 45.5
BcaC06g34972 Brassica carinata HOM05D004571 ORTHO05D005334 4.9e-08 61.2 52 63.5
TWI23G0269 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 1.4e-07 59.7 33 75.8


User provided reference genes

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