Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-60 236.1 107 100.0
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 7.5e-58 226.9 107 96.3
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 7.5e-58 226.9 107 96.3
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.3e-54 216.1 107 90.7
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 2.8e-52 208.4 107 89.7
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.5e-50 202.6 108 85.2
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.6e-47 192.6 105 81.9
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 1.1e-45 186.4 102 81.4
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 9.5e-45 183.3 103 79.6
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.2e-44 183.0 105 77.1
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 4.0e-43 177.9 103 77.7
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 3.4e-42 174.9 103 75.7
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 6.4e-41 170.6 102 73.5
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.9e-40 169.1 101 72.3
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.9e-40 169.1 105 74.3
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 5.4e-40 167.5 102 74.5
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 9.2e-40 166.8 101 74.3
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 9.2e-40 166.8 101 74.3
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 3.5e-39 164.9 102 68.6
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 3.5e-39 164.9 102 66.7
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.5e-39 164.9 102 66.7
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.5e-39 164.9 102 66.7
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.5e-39 164.9 102 66.7
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 4.6e-39 164.5 102 66.7
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 4.6e-39 164.5 102 65.7
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.7e-38 162.5 108 70.4
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.7e-38 162.5 108 70.4
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.7e-38 162.5 102 65.7
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 3.0e-38 161.8 102 65.7
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 5.1e-38 161.0 104 64.4
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 5.1e-38 161.0 102 64.7
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 6.6e-38 160.6 102 63.7
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 8.6e-38 160.2 102 65.7
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.1e-37 159.8 102 65.7
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.5e-37 159.5 102 63.7
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 1.9e-37 159.1 102 64.7
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.9e-37 159.1 102 64.7
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 3.3e-37 158.3 102 63.7
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 3.3e-37 158.3 102 65.7
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 4.3e-37 157.9 102 63.7
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 5.6e-37 157.5 102 62.7
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 5.6e-37 157.5 102 62.7
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 1.6e-36 156.0 102 63.7
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.8e-36 155.2 102 63.7
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 2.8e-36 155.2 92 70.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 2.8e-36 155.2 104 63.5
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 3.6e-36 154.8 102 63.7
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 4.0e-35 151.4 94 67.0
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 4.0e-35 151.4 104 60.6
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 6.9e-35 150.6 100 62.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 6.9e-35 150.6 100 62.0
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 9.0e-35 150.2 102 59.8
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.5e-34 149.4 103 60.2
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 2.0e-34 149.1 95 65.3
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 2.0e-34 149.1 102 60.8
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 7.6e-34 147.1 100 60.0
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 7.6e-34 147.1 100 60.0
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 7.6e-34 147.1 102 58.8
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 7.6e-34 147.1 102 59.8
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.7e-33 146.0 102 58.8
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 3.8e-33 144.8 102 54.9
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 8.4e-33 143.7 101 60.4
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.9e-32 142.5 103 55.3
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.4e-32 142.1 100 58.0
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 9.3e-32 140.2 102 56.9
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.6e-31 137.9 89 61.8
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.7e-30 136.0 86 65.1
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.9e-29 132.5 105 56.2
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 4.3e-29 131.3 87 59.8
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 9.6e-29 130.2 102 53.9
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.6e-28 129.4 101 56.4
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 2.1e-28 129.0 86 62.8
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 2.8e-28 128.6 101 59.4
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.1e-27 126.7 101 57.4
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.1e-27 126.7 100 49.0
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.8e-27 125.9 102 52.0
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.8e-27 125.9 89 60.7
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.5e-26 122.9 62 75.8
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 2.0e-26 122.5 99 56.6
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 2.0e-26 122.5 99 56.6
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 3.4e-26 121.7 100 51.0
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.5e-26 121.3 106 49.1
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 5.8e-26 120.9 98 52.0
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 9.9e-26 120.2 90 57.8
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.7e-25 119.4 103 49.5
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 8.4e-25 117.1 84 58.3
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 8.4e-25 117.1 121 46.3
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.1e-24 116.7 89 55.1
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.4e-24 116.3 99 51.5
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 1.4e-24 116.3 91 52.7
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 4.2e-24 114.8 100 47.0
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 7.1e-24 114.0 101 50.5
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.5e-23 111.7 91 47.3
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 6.0e-23 110.9 63 68.3
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.8e-22 109.4 95 51.6
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.8e-22 109.4 101 50.5
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.8e-22 109.4 64 64.1
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 3.9e-22 108.2 97 50.5
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 6.7e-22 107.5 101 49.5
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 8.7e-22 107.1 61 68.9
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.1e-21 106.7 89 49.4
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 2.5e-21 105.5 107 44.9
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 4.0e-19 98.2 48 77.1
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 5.3e-19 97.8 111 41.4
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.2e-18 96.7 106 41.5
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-17 93.2 49 77.6
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 3.8e-17 91.7 89 47.2
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 2.5e-13 79.0 90 38.9
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 7.1e-08 60.8 93 34.4


User provided reference genes

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