Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.2e-115 419.9 214 100.0
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.2e-115 419.9 214 100.0
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.9e-108 396.0 211 96.7
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 2.4e-108 395.6 211 96.7
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 2.4e-108 395.6 211 96.7
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 2.1e-107 392.5 215 94.0
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 7.1e-100 367.5 233 85.4
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 2.3e-98 362.5 220 86.4
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 2.5e-97 359.0 227 83.3
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 1.6e-96 356.3 218 85.3
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 1.6e-96 356.3 218 85.3
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.6e-96 356.3 224 84.8
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 3.7e-96 355.1 229 82.5
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 2.4e-95 352.4 222 82.9
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 1.5e-94 349.7 234 81.2
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 7.6e-94 347.4 228 80.7
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 1.7e-93 346.3 219 82.6
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.7e-72 276.6 195 69.7
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 2.8e-72 275.8 211 68.7
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 8.2e-72 274.2 195 69.7
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 1.1e-71 273.9 201 70.6
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 2.4e-71 272.7 197 71.1
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 2.4e-71 272.7 173 76.9
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 3.1e-71 272.3 195 72.8
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 5.3e-71 271.6 177 74.6
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 7.0e-71 271.2 189 69.8
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 9.1e-71 270.8 189 69.8
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 1.6e-70 270.0 197 70.1
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 3.5e-70 268.9 189 69.3
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 4.5e-70 268.5 205 66.8
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 1.0e-69 267.3 197 70.1
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 1.0e-69 267.3 189 70.4
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.0e-69 267.3 186 69.9
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.3e-69 266.9 203 66.5
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.7e-69 266.5 190 71.6
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 2.2e-69 266.2 210 63.8
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 2.9e-69 265.8 267 56.9
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 3.8e-69 265.4 205 65.9
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 5.0e-69 265.0 205 66.3
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 5.0e-69 265.0 208 65.9
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 6.5e-69 264.6 204 65.7
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 8.5e-69 264.2 198 65.2
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 8.5e-69 264.2 205 67.3
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.1e-68 263.8 176 73.3
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.1e-68 263.8 196 69.4
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.5e-68 263.5 205 64.9
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.9e-68 263.1 184 70.7
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 1.9e-68 263.1 211 62.6
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 1.9e-68 263.1 191 67.0
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 2.5e-68 262.7 198 66.7
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 5.5e-68 261.5 184 70.1
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 7.2e-68 261.2 179 72.6
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 1.6e-67 260.0 240 60.0
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 3.6e-67 258.8 200 69.0
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 4.7e-67 258.5 175 70.3
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 4.7e-67 258.5 174 73.0
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 6.1e-67 258.1 201 66.2
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 6.1e-67 258.1 207 64.7
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 8.0e-67 257.7 189 68.8
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 8.0e-67 257.7 174 73.6
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 1.4e-66 256.9 173 72.8
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 1.4e-66 256.9 176 71.0
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 8.8e-66 254.2 185 67.6
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.5e-65 253.4 190 67.4
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 2.6e-65 252.7 211 63.5
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 4.4e-65 251.9 183 67.2
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 7.5e-65 251.1 209 61.7
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 1.3e-64 250.4 183 68.9
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 1.3e-64 250.4 169 71.0
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 4.8e-64 248.4 203 63.5
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 5.3e-63 245.0 195 61.0
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 9.1e-63 244.2 176 67.0
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 2.7e-62 242.7 177 66.1
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 1.3e-61 240.4 188 61.7
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 2.2e-61 239.6 213 57.7
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 5.0e-61 238.4 202 59.4
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 3.2e-60 235.7 178 68.0
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 5.5e-60 235.0 172 62.2
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 2.1e-59 233.0 175 67.4
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 2.7e-59 232.6 224 54.9
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 1.4e-58 230.3 178 66.9
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.0e-58 229.2 172 64.0
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 5.2e-58 228.4 186 60.2
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 2.2e-56 223.0 150 72.0
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 4.8e-56 221.9 163 67.5
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 8.3e-56 221.1 205 61.0
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.8e-55 219.9 168 66.1
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 1.0e-53 214.2 217 57.1
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.0e-53 214.2 153 69.3
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.3e-53 213.8 168 66.7
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.9e-52 209.9 156 66.0
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 3.6e-51 205.7 226 55.8
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 1.0e-50 204.1 135 68.9
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 4.4e-49 198.7 183 60.1
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 7.5e-49 198.0 178 59.0
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 1.1e-47 194.1 150 68.0
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 2.0e-46 189.9 196 56.1
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.3e-45 186.4 172 54.7
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 1.9e-44 183.3 164 52.4
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 9.5e-44 181.0 146 63.0
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.6e-43 180.3 193 52.8
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 2.3e-42 176.4 164 50.0
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 8.9e-42 174.5 127 74.0
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 1.2e-41 174.1 122 72.1
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 8.3e-40 167.9 163 49.1
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 2.7e-38 162.9 162 54.9
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 7.3e-36 154.8 190 47.4
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.2e-35 154.1 145 55.2
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 3.7e-32 142.5 122 54.9
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 2.4e-31 139.8 102 64.7
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 5.4e-31 138.7 113 60.2
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 1.7e-29 133.7 71 94.4
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 3.3e-28 129.4 108 57.4
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 6.2e-27 125.2 86 75.6
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 8.1e-27 124.8 142 49.3
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 2.0e-25 120.2 127 52.8
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 4.9e-24 115.5 98 68.4
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 2.4e-23 113.2 88 65.9
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 1.0e-21 107.8 59 83.1
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 3.9e-21 105.9 103 51.5
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 5.1e-21 105.5 126 47.6
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.8e-18 97.1 68 79.4
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 3.8e-16 89.4 68 73.5
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 2.7e-14 83.2 58 75.9
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 7.3e-12 75.1 49 71.4
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 7.3e-12 75.1 53 71.7
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 2.4e-10 70.1 238 24.8
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 4.2e-07 59.3 35 85.7
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 1.6e-06 57.4 46 60.9


User provided reference genes

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