Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 4.7e-37 157.1 68 100.0
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 4.4e-35 150.6 68 95.6
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 2.8e-34 147.9 65 96.9
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 6.3e-34 146.7 66 95.5
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 1.1e-33 146.0 68 95.6
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 2.4e-33 144.8 67 95.5
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 2.4e-33 144.8 67 95.5
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 2.4e-33 144.8 67 95.5
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 2.4e-33 144.8 67 95.5
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 2.4e-33 144.8 67 95.5
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 3.1e-33 144.4 67 92.5
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 3.1e-33 144.4 67 92.5
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 4.1e-33 144.1 65 93.8
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 4.1e-33 144.1 65 93.8
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 5.3e-33 143.7 69 91.3
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 7.7e-32 139.8 68 91.2
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 7.7e-32 139.8 68 91.2
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 7.7e-32 139.8 68 91.2
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 6.5e-31 136.7 69 91.3
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 4.2e-30 134.0 59 94.9
BraA02t07081Z Brassica rapa HOM05D006241 ORTHO05D007842 5.5e-30 133.7 58 96.6
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 7.2e-30 133.3 69 84.1
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.8e-28 128.6 69 76.8
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 2.3e-28 128.3 65 84.6
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 3.0e-28 127.9 69 76.8
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 6.7e-28 126.7 71 80.3
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 2.6e-27 124.8 70 77.1
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 2.6e-27 124.8 67 77.6
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 5.7e-27 123.6 66 74.2
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 1.3e-26 122.5 69 75.4
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 1.3e-26 122.5 69 75.4
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 1.3e-26 122.5 69 75.4
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 1.3e-26 122.5 69 75.4
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 1.7e-26 122.1 71 77.5
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 1.7e-26 122.1 67 74.6
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 4.8e-26 120.6 71 76.1
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 4.8e-26 120.6 71 74.6
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 6.3e-26 120.2 68 73.5
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 6.3e-26 120.2 67 74.6
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 8.2e-26 119.8 65 73.8
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 1.1e-25 119.4 68 73.5
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 1.4e-25 119.0 71 74.6
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 1.4e-25 119.0 67 74.6
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 2.4e-25 118.2 71 74.6
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 3.1e-25 117.9 63 76.2
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 5.3e-25 117.1 69 72.5
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 5.3e-25 117.1 71 74.6
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 5.3e-25 117.1 71 73.2
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 5.3e-25 117.1 71 73.2
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 5.3e-25 117.1 71 73.2
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 5.3e-25 117.1 63 76.2
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 5.3e-25 117.1 71 73.2
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 7.0e-25 116.7 67 77.6
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 9.1e-25 116.3 66 71.2
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 9.1e-25 116.3 67 71.6
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 9.1e-25 116.3 71 73.2
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 9.1e-25 116.3 71 74.6
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.2e-24 115.9 67 71.6
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 1.6e-24 115.5 67 74.6
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 1.6e-24 115.5 66 68.2
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 2.0e-24 115.2 68 72.1
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 2.6e-24 114.8 67 76.1
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 2.6e-24 114.8 62 77.4
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 3.5e-24 114.4 63 73.0
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 4.5e-24 114.0 67 70.1
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 1.0e-23 112.8 60 75.0
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.7e-23 112.1 63 68.3
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 2.2e-23 111.7 66 74.2
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 2.2e-23 111.7 66 72.7
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 3.8e-23 110.9 65 67.7
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 3.8e-23 110.9 65 67.7
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 3.8e-23 110.9 70 67.1
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 3.8e-23 110.9 69 69.6
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 5.0e-23 110.5 65 73.8
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 5.0e-23 110.5 60 70.0
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 6.5e-23 110.2 71 69.0
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 8.5e-23 109.8 67 68.7
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 8.5e-23 109.8 65 73.8
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 1.1e-22 109.4 67 70.1
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 1.1e-22 109.4 65 69.2
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 1.1e-22 109.4 67 71.6
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 1.1e-22 109.4 63 69.8
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 1.1e-22 109.4 65 69.2
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.5e-22 109.0 67 67.2
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 1.5e-22 109.0 60 71.7
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 1.5e-22 109.0 63 69.8
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 2.5e-22 108.2 65 70.8
GSVIVG01008691001 Vitis vinifera HOM05D006241 ORTHO05D007842 3.2e-22 107.8 51 76.5
ECA248G1104 Erigeron canadensis HOM05D006241 ORTHO05D007842 1.2e-21 105.9 72 68.1
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 3.6e-21 104.4 60 71.7
BolC2t09367H Brassica oleracea HOM05D006241 ORTHO05D007842 4.7e-21 104.0 46 97.8
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 8.0e-21 103.2 56 71.4
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 1.4e-20 102.4 63 69.8
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 2.3e-20 101.7 68 64.7
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 6.8e-20 100.1 60 68.3
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 1.5e-19 99.0 57 66.7
Os06g0725400 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 2.0e-19 98.6 61 68.9
Pp3c21_21340 Physcomitrium patens HOM05D006241 ORTHO05D007842 5.7e-19 97.1 69 59.4
Pp3c18_1920 Physcomitrium patens HOM05D006241 ORTHO05D007842 7.5e-19 96.7 70 57.1
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 4.1e-17 90.9 50 80.0
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 4.1e-17 90.9 50 78.0
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 5.3e-17 90.5 51 74.5
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 9.1e-17 89.7 60 66.7
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 2.0e-16 88.6 51 72.5
Mapoly0108s0047 Marchantia polymorpha HOM05D006241 ORTHO05D007842 2.0e-16 88.6 59 57.6
Mapoly0103s0030 Marchantia polymorpha HOM05D006241 ORTHO05D007842 3.5e-16 87.8 56 60.7
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 7.7e-16 86.7 50 72.0
HPP92_021050 Vanilla planifolia HOM05D006241 ORTHO05D007842 6.5e-15 83.6 48 68.8
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 7.2e-14 80.1 48 64.6
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 2.1e-13 78.6 48 68.8
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 2.7e-13 78.2 48 66.7
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 4.7e-13 77.4 50 64.0
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 1.7e-10 68.9 52 65.4
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 9.1e-09 63.2 52 59.6
vmacro04395 Vaccinium macrocarpon HOM05D006241 ORTHO05D007842 1.6e-08 62.4 35 71.4
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 5.9e-08 60.5 49 55.1
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 2.5e-06 55.1 38 65.8
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 4.2e-06 54.3 33 63.6
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 5.5e-06 53.9 33 63.6
MCO07G568 Micromonas commoda HOM05D006241 ORTHO05D007842 7.2e-06 53.5 61 39.3
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 7.2e-06 53.5 33 66.7
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 9.5e-06 53.1 33 60.6
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 9.5e-06 53.1 33 60.6


User provided reference genes

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