Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.7e-243 845.5 415 100.0
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 6.8e-240 833.6 412 99.5
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 3.6e-233 811.2 418 95.7
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 3.6e-233 811.2 418 95.7
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 3.6e-233 811.2 418 95.7
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 2.6e-231 805.1 418 94.5
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 2.0e-207 725.7 432 82.6
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 4.5e-207 724.5 432 82.6
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 4.5e-207 724.5 432 82.6
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 4.5e-207 724.5 432 82.6
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 6.4e-206 720.7 432 82.9
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.9e-205 719.2 432 81.7
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 3.3e-202 708.4 442 79.2
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.6e-201 706.1 440 79.8
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 2.1e-201 705.7 435 80.0
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.1e-194 683.3 427 78.7
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 4.8e-193 677.9 432 76.6
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 6.3e-185 651.0 435 73.1
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 6.8e-155 551.2 437 63.2
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.6e-154 549.3 434 63.6
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.7e-153 546.6 429 63.9
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.1e-152 543.9 437 61.8
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 2.4e-152 542.7 422 63.0
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 5.9e-151 538.1 430 62.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.7e-150 536.6 419 64.9
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.5e-150 534.6 430 60.5
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 8.5e-150 534.3 428 61.7
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 4.2e-149 531.9 441 60.1
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.4e-147 526.9 430 62.3
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 3.0e-147 525.8 437 60.9
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 6.8e-147 524.6 436 60.6
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 8.8e-147 524.2 419 60.9
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.5e-146 523.5 437 61.1
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.6e-146 522.7 427 62.8
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.4e-146 522.3 375 65.6
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 3.4e-146 522.3 419 60.4
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 5.7e-146 521.5 409 63.6
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 7.5e-146 521.2 419 60.9
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.7e-145 520.0 351 68.7
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 8.3e-145 517.7 428 59.8
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.1e-144 517.3 419 60.1
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.8e-144 516.5 420 59.5
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 7.0e-144 514.6 417 60.9
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 7.0e-144 514.6 419 59.9
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 7.0e-144 514.6 354 68.1
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 9.2e-144 514.2 410 62.4
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 9.2e-144 514.2 416 60.1
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.6e-143 513.5 353 67.4
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 4.5e-143 511.9 460 59.8
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 5.9e-143 511.5 408 61.8
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.9e-143 511.5 419 60.4
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 7.7e-143 511.1 395 62.5
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 7.7e-143 511.1 424 61.1
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 1.0e-142 510.8 356 66.9
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 2.3e-142 509.6 421 61.0
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 5.0e-142 508.4 244 98.8
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 5.0e-142 508.4 414 60.9
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 6.6e-142 508.1 413 61.3
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.5e-141 506.9 422 59.0
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.3e-141 505.8 405 61.7
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 5.6e-141 505.0 426 58.9
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 5.6e-141 505.0 415 60.5
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 5.6e-141 505.0 438 58.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 7.3e-141 504.6 414 60.9
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 9.5e-141 504.2 420 60.0
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 2.8e-140 502.7 428 58.9
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 3.6e-140 502.3 419 61.3
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 4.7e-140 501.9 417 59.7
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 4.7e-140 501.9 437 57.7
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 4.7e-140 501.9 434 58.1
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.0e-139 500.7 421 59.9
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.0e-139 500.7 448 56.2
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 1.4e-139 500.4 413 59.6
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.3e-139 499.6 432 57.4
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.0e-139 498.8 350 66.0
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 6.8e-139 498.0 405 62.5
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 6.8e-139 498.0 350 65.7
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 8.9e-139 497.7 414 61.4
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 8.9e-139 497.7 409 59.7
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 2.0e-138 496.5 414 60.6
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 4.4e-138 495.4 417 59.0
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.7e-138 495.0 412 59.5
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 5.7e-138 495.0 415 59.8
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 7.5e-138 494.6 450 56.0
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.3e-137 493.8 407 60.0
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.7e-137 493.4 407 59.7
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.7e-137 493.4 412 59.5
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.9e-137 492.7 429 56.6
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.7e-137 492.3 417 59.0
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 4.9e-137 491.9 424 58.3
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 4.9e-137 491.9 413 59.3
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.1e-136 490.7 423 57.7
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.8e-136 490.0 435 56.8
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.2e-136 489.2 406 59.9
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 5.4e-136 488.4 397 61.0
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 5.4e-136 488.4 408 58.3
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.0e-135 486.5 413 60.3
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.0e-135 486.5 411 57.4
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 7.8e-135 484.6 414 58.5
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.0e-134 484.2 411 58.6
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 1.7e-134 483.4 411 58.4
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.7e-134 483.4 437 57.0
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 3.9e-134 482.3 404 59.7
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 5.0e-134 481.9 415 58.8
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.6e-134 481.1 417 58.3
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.5e-133 480.3 441 55.6
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.5e-133 480.3 412 58.5
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 2.5e-133 479.6 408 58.3
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 7.3e-133 478.0 410 59.0
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 7.3e-133 478.0 413 59.1
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 1.2e-132 477.2 347 64.0
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.1e-132 476.5 427 56.0
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 2.3e-131 473.0 404 57.7
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 4.0e-131 472.2 350 62.0
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.6e-130 469.5 410 57.3
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.3e-129 467.2 333 65.8
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.9e-128 463.4 416 56.7
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.3e-126 456.4 401 56.9
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.5e-125 453.8 439 55.1
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.1e-124 449.9 348 60.3
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 3.6e-124 449.1 318 68.2
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-123 446.4 429 55.0
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.4e-122 442.2 416 53.4
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 9.8e-122 441.0 408 56.4
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 2.2e-121 439.9 430 53.3
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 3.7e-121 439.1 423 53.2
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 9.2e-120 434.5 420 53.1
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-118 431.0 405 54.1
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-118 430.3 395 55.7
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 6.6e-118 428.3 424 52.8
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.9e-117 426.8 430 50.0
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 4.3e-117 425.6 417 54.0
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 8.1e-116 421.4 419 52.7
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 2.3e-115 419.9 292 66.8
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.1e-115 419.5 416 52.9
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 3.1e-115 419.5 411 53.5
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 8.9e-115 417.9 387 55.0
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.5e-114 417.2 342 58.2
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.9e-113 412.1 342 57.9
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.9e-105 386.3 377 51.2
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 4.2e-104 382.5 340 54.1
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 7.1e-104 381.7 369 51.2
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.2e-103 380.9 340 54.4
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.0e-102 377.9 340 53.8
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.7e-102 377.1 276 63.4
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 4.8e-100 369.0 424 45.8
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.1e-99 366.3 250 65.6
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.3e-97 360.9 305 56.4
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 1.7e-97 360.5 432 48.4
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-96 357.8 369 48.8
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.1e-91 341.3 240 64.2
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 7.6e-90 335.1 340 49.7
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.3e-89 334.3 352 47.2
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.1e-87 327.0 343 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.3e-86 323.6 341 47.8
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.4e-83 313.5 237 61.6
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.5e-82 310.8 401 43.9
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.4e-82 309.7 349 46.4
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.3e-81 307.8 296 57.8
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.8e-78 297.4 237 57.4
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.3e-76 291.2 298 49.3
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.9e-75 285.4 346 42.5
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 5.0e-73 279.3 241 53.5
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.6e-71 272.7 405 40.2
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.8e-70 270.8 340 41.8
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.5e-69 267.7 360 39.2
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 7.4e-69 265.4 347 41.2
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.3e-68 264.6 355 40.6
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.8e-62 241.9 346 37.0
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 4.5e-58 229.6 375 36.0
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 7.2e-40 169.1 152 57.9
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.6e-34 151.4 154 51.3
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.3e-33 147.5 416 26.9
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.3e-22 110.9 85 55.3
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.9e-20 103.2 122 43.4
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.4e-20 102.8 114 43.0
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 4.6e-18 96.7 79 50.6
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.2e-13 82.0 130 43.8
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.6e-13 80.9 100 39.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.6e-10 70.1 136 38.2
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.1e-07 59.3 67 32.8
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 8.9e-06 55.8 53 56.6


User provided reference genes

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