Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p28550 Brassica napus HOM05D000455 ORTHO05D031809 3.9e-93 344.7 168 100.0
BraA07t30493Z Brassica rapa HOM05D000455 ORTHO05D031809 3.9e-93 344.7 168 100.0
AL2G36450 Arabidopsis lyrata HOM05D000455 ORTHO05D000434 1.6e-25 120.2 117 60.7
Carub.0002s2324 Capsella rubella HOM05D000455 ORTHO05D000434 3.5e-25 119.0 121 57.9
AT1G76350 Arabidopsis thaliana HOM05D000455 ORTHO05D000434 5.0e-24 115.2 115 58.3
Sp5g31480 Schrenkiella parvula HOM05D000455 ORTHO05D000434 5.0e-24 115.2 115 60.0
CARHR069900 Cardamine hirsuta HOM05D000455 ORTHO05D000434 1.5e-23 113.6 122 55.7
Thhalv10018128m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 9.4e-23 110.9 111 58.6
A07p41970 Brassica napus HOM05D000455 ORTHO05D000434 2.3e-21 106.3 97 58.8
C06p50540 Brassica napus HOM05D000455 ORTHO05D000434 6.8e-21 104.8 97 57.7
BolC6t40079H Brassica oleracea HOM05D000455 ORTHO05D000434 6.8e-21 104.8 97 57.7
BraA07t31727Z Brassica rapa HOM05D000455 ORTHO05D000434 6.8e-21 104.8 97 57.7
Aa31LG4G6430 Aethionema arabicum HOM05D000455 ORTHO05D000434 6.3e-19 98.2 90 58.9
BcaC08g47134 Brassica carinata HOM05D000455 ORTHO05D000434 1.2e-17 94.0 46 95.7
BcaC08g47260 Brassica carinata HOM05D000455 ORTHO05D000434 1.6e-17 93.6 46 93.5
AL1G33600 Arabidopsis lyrata HOM05D000455 ORTHO05D000434 1.6e-14 83.6 46 84.8
CARHR021100 Cardamine hirsuta HOM05D000455 ORTHO05D000434 1.6e-14 83.6 46 84.8
AT1G20640 Arabidopsis thaliana HOM05D000455 ORTHO05D000434 2.1e-14 83.2 46 84.8
BcaB07g32066 Brassica carinata HOM05D000455 ORTHO05D000434 2.1e-14 83.2 46 84.8
Thhalv10006790m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 2.1e-14 83.2 46 84.8
BcaB03g14309 Brassica carinata HOM05D000455 ORTHO05D000434 2.8e-14 82.8 46 84.8
BcaC05g25974 Brassica carinata HOM05D000455 ORTHO05D000434 2.8e-14 82.8 46 82.6
A06p16630 Brassica napus HOM05D000455 ORTHO05D000434 2.8e-14 82.8 46 82.6
C05p19260 Brassica napus HOM05D000455 ORTHO05D000434 2.8e-14 82.8 46 82.6
BolC5t30627H Brassica oleracea HOM05D000455 ORTHO05D000434 2.8e-14 82.8 46 82.6
BraA06t24770Z Brassica rapa HOM05D000455 ORTHO05D000434 2.8e-14 82.8 46 82.6
THA.LOC104811470 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 2.8e-14 82.8 107 48.6
BcaC06g34826 Brassica carinata HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 82.6
A07p15560 Brassica napus HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 82.6
A08p29310 Brassica napus HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 84.8
C07p22920 Brassica napus HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 82.6
C08p20270 Brassica napus HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 84.8
BolC7t42831H Brassica oleracea HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 82.6
BolC8t49656H Brassica oleracea HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 84.8
BraA07t29295Z Brassica rapa HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 82.6
BraA08t34866Z Brassica rapa HOM05D000455 ORTHO05D000434 8.0e-14 81.3 46 84.8
Sp1g18360 Schrenkiella parvula HOM05D000455 ORTHO05D000434 1.0e-13 80.9 46 84.8
BcaB03g12860 Brassica carinata HOM05D000455 ORTHO05D000434 3.0e-13 79.3 46 82.6
Carub.0001s2011 Capsella rubella HOM05D000455 ORTHO05D000434 4.0e-13 79.0 105 46.7
BcaB07g32063 Brassica carinata HOM05D000455 ORTHO05D000434 1.2e-12 77.4 87 50.6
Aa31LG7G4860 Aethionema arabicum HOM05D000455 ORTHO05D000434 1.5e-12 77.0 46 82.6
THA.LOC104809819 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 3.4e-12 75.9 127 40.9
Ciclev10000188m.g Citrus clementina HOM05D000455 ORTHO05D000434 4.1e-10 68.9 46 69.6
BcaC07g39046 Brassica carinata HOM05D000455 ORTHO05D000434 7.0e-10 68.2 100 45.0
Manes.18G004300 Manihot esculenta HOM05D000455 ORTHO05D000434 7.0e-10 68.2 148 34.5
Cfa014095 Carpinus fangiana HOM05D000455 ORTHO05D000434 1.2e-09 67.4 85 42.4
Potri.005G251700 Populus trichocarpa HOM05D000455 ORTHO05D000434 2.0e-09 66.6 46 69.6
Migut.N02963 Erythranthe guttata HOM05D000455 ORTHO05D000434 2.7e-09 66.2 46 69.6
BcaC08g45534 Brassica carinata HOM05D000455 ORTHO05D031809 3.5e-09 65.9 35 88.6
Atru.chr13.128 Acer truncatum HOM05D000455 ORTHO05D000434 5.9e-09 65.1 123 36.6
Cpa.g.sc26.186 Carica papaya HOM05D000455 ORTHO05D000434 7.8e-09 64.7 46 67.4
Cc10_g00560 Coffea canephora HOM05D000455 ORTHO05D000434 7.8e-09 64.7 108 39.8
Oeu035844.1 Olea europaea HOM05D000455 ORTHO05D000434 7.8e-09 64.7 84 44.0
Sabra02G0007100 Salix brachista HOM05D000455 ORTHO05D000434 7.8e-09 64.7 46 67.4
TAR376G0326 Trochodendron aralioides HOM05D000455 ORTHO05D000434 1.3e-08 63.9 46 69.6
Duzib116G0702 Durio zibethinus HOM05D000455 ORTHO05D000434 1.7e-08 63.5 99 40.4
MD06G1009300 Malus domestica HOM05D000455 ORTHO05D000434 2.3e-08 63.2 84 44.0
Potri.002G009700 Populus trichocarpa HOM05D000455 ORTHO05D000434 3.0e-08 62.8 46 65.2
Sabra05G0195000 Salix brachista HOM05D000455 ORTHO05D000434 3.9e-08 62.4 46 65.2
Thecc.08G060200 Theobroma cacao HOM05D000455 ORTHO05D000434 5.0e-08 62.0 99 39.4
TWI36G0573 Tripterygium wilfordii HOM05D000455 ORTHO05D000434 6.6e-08 61.6 84 42.9
Actinidia17047 Actinidia chinensis HOM05D000455 ORTHO05D000434 8.6e-08 61.2 84 46.4
MSTRG.22096 Avicennia marina HOM05D000455 ORTHO05D000434 1.1e-07 60.8 86 43.0
EL10Ac1g01940 Beta vulgaris HOM05D000455 ORTHO05D000434 1.1e-07 60.8 83 44.6
COL.COLO4_36398 Corchorus olitorius HOM05D000455 ORTHO05D000434 1.1e-07 60.8 84 41.7
DCAR_022972 Daucus carota HOM05D000455 ORTHO05D000434 1.1e-07 60.8 77 44.2
SGA_v2.0_scaffold54G19669 Striga asiatica HOM05D000455 ORTHO05D000434 1.5e-07 60.5 135 34.1
MSTRG.24496 Avicennia marina HOM05D000455 ORTHO05D000434 1.9e-07 60.1 84 44.0
PGR083G1851 Punica granatum HOM05D000455 ORTHO05D000434 2.5e-07 59.7 93 37.6
Eucgr.F01779 Eucalyptus grandis HOM05D000455 ORTHO05D000434 3.3e-07 59.3 110 35.5
Manes.05G130800 Manihot esculenta HOM05D000455 ORTHO05D000434 3.3e-07 59.3 46 63.0
Ah.00g000910 Amaranthus hybridus HOM05D000455 ORTHO05D000434 4.3e-07 58.9 83 42.2
FAN04G0875 Fragaria x ananassa HOM05D000455 ORTHO05D000434 4.3e-07 58.9 84 39.3
FAN08G0764 Fragaria x ananassa HOM05D000455 ORTHO05D000434 4.3e-07 58.9 84 40.5
FAN13G1418 Fragaria x ananassa HOM05D000455 ORTHO05D000434 4.3e-07 58.9 84 39.3
Actinidia15498 Actinidia chinensis HOM05D000455 ORTHO05D000434 5.6e-07 58.5 84 42.9
FvH4_5g25270 Fragaria vesca HOM05D000455 ORTHO05D000434 5.6e-07 58.5 84 40.5
FAN18G0669 Fragaria x ananassa HOM05D000455 ORTHO05D000434 5.6e-07 58.5 84 40.5
ECA233G2250 Erigeron canadensis HOM05D000455 ORTHO05D000434 7.3e-07 58.2 119 36.1
Peaxi162Scf00711g00212 Petunia axillaris HOM05D000455 ORTHO05D000434 9.5e-07 57.8 84 42.9
TWI56G1481 Tripterygium wilfordii HOM05D000455 ORTHO05D000434 9.5e-07 57.8 46 60.9
Glyma.04G017400 Glycine max HOM05D000455 ORTHO05D000434 1.2e-06 57.4 86 40.7
Dinv31953 Davidia involucrata HOM05D000455 ORTHO05D000434 1.6e-06 57.0 84 42.9
Gohir.A01G104900 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.6e-06 57.0 46 58.7
Gorai.002G115800 Gossypium raimondii HOM05D000455 ORTHO05D000434 1.6e-06 57.0 46 58.7
MD16G1285500 Malus domestica HOM05D000455 ORTHO05D000434 1.6e-06 57.0 82 40.2
Nitab4.5_0009395g0020 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.6e-06 57.0 77 42.9
RcHm_v2.0_Chr7g0215411 Rosa chinensis HOM05D000455 ORTHO05D000434 1.6e-06 57.0 84 38.1
TAR381G0015 Trochodendron aralioides HOM05D000455 ORTHO05D000434 1.6e-06 57.0 46 60.9
unitig_21.g20585 Utricularia gibba HOM05D000455 ORTHO05D000434 1.6e-06 57.0 90 36.7
VMungo1309G0441 Vigna mungo HOM05D000455 ORTHO05D000434 1.6e-06 57.0 84 40.5
Actinidia18002 Actinidia chinensis HOM05D000455 ORTHO05D000434 2.1e-06 56.6 46 58.7
Ca_15429_v3 Cicer arietinum L. HOM05D000455 ORTHO05D000434 2.1e-06 56.6 85 40.0
Gohir.D01G090100 Gossypium hirsutum HOM05D000455 ORTHO05D000434 2.1e-06 56.6 46 58.7
Psat0s498g0160 Pisum sativum HOM05D000455 ORTHO05D000434 2.1e-06 56.6 85 41.2
Prupe.5G011200 Prunus persica HOM05D000455 ORTHO05D000434 2.1e-06 56.6 46 60.9
HanXRQChr06g0184111 Helianthus annuus HOM05D000455 ORTHO05D000434 2.8e-06 56.2 46 58.7
HanXRQChr14g0427451 Helianthus annuus HOM05D000455 ORTHO05D000434 2.8e-06 56.2 106 36.8
Lj1g0003433 Lotus japonicus HOM05D000455 ORTHO05D000434 2.8e-06 56.2 91 38.5
Oeu000696.1 Olea europaea HOM05D000455 ORTHO05D000434 2.8e-06 56.2 46 60.9
Hund05095 Selenicereus undatus HOM05D000455 ORTHO05D000434 2.8e-06 56.2 80 40.0
Sc26g0004650 Simmondsia chinensis HOM05D000455 ORTHO05D000434 2.8e-06 56.2 140 35.0
GSVIVG01013370001 Vitis vinifera HOM05D000455 ORTHO05D000434 2.8e-06 56.2 94 36.2
Migut.B00011 Erythranthe guttata HOM05D000455 ORTHO05D000434 3.6e-06 55.8 47 57.4
Gohir.A05G179000 Gossypium hirsutum HOM05D000455 ORTHO05D000434 3.6e-06 55.8 77 40.3
Lj4A806T79 Lonicera japonica HOM05D000455 ORTHO05D000434 3.6e-06 55.8 45 64.4
Lj9C406T5 Lonicera japonica HOM05D000455 ORTHO05D000434 3.6e-06 55.8 53 49.1
SalBow7G0713 Salvia bowleyana HOM05D000455 ORTHO05D000434 3.6e-06 55.8 86 40.7
Aqoxy6G01651 Aquilegia oxysepala HOM05D000455 ORTHO05D000434 4.7e-06 55.5 50 58.0
Glyma.06G017800 Glycine max HOM05D000455 ORTHO05D000434 4.7e-06 55.5 86 38.4
Hma1.2p1_0507F.1_g168610 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 4.7e-06 55.5 84 41.7
Nn5g30967 Nelumbo nucifera HOM05D000455 ORTHO05D000434 4.7e-06 55.5 46 60.9
QL02p014633 Quercus lobata HOM05D000455 ORTHO05D000434 4.7e-06 55.5 77 39.0
Actinidia20569 Actinidia chinensis HOM05D000455 ORTHO05D000434 6.2e-06 55.1 46 58.7
QL02p014450 Quercus lobata HOM05D000455 ORTHO05D000434 6.2e-06 55.1 77 39.0
TPR.G38089 Trifolium pratense HOM05D000455 ORTHO05D000434 6.2e-06 55.1 85 37.6
CiPaw.07G137700 Carya illinoinensis HOM05D000455 ORTHO05D000434 8.0e-06 54.7 77 40.3
AUR62036843 Chenopodium quinoa HOM05D000455 ORTHO05D000434 8.0e-06 54.7 80 38.8
AUR62040813 Chenopodium quinoa HOM05D000455 ORTHO05D000434 8.0e-06 54.7 80 40.0
HanXRQChr16g0517401 Helianthus annuus HOM05D000455 ORTHO05D000434 8.0e-06 54.7 70 45.7
Lsat_1_v5_gn_8_26560 Lactuca sativa HOM05D000455 ORTHO05D000434 8.0e-06 54.7 77 41.6
MBI05_g28471_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 8.0e-06 54.7 144 29.9
MD06G1009200 Malus domestica HOM05D000455 ORTHO05D000434 8.0e-06 54.7 46 58.7


User provided reference genes

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