Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p28020 Brassica napus HOM05D008464 ORTHO05D011143 3.0e-54 215.3 144 100.0
BraA07t30447Z Brassica rapa HOM05D008464 ORTHO05D011143 7.8e-50 200.7 144 85.4
C06p31300 Brassica napus HOM05D008464 ORTHO05D011143 1.1e-48 196.8 144 87.5
BcaC08g45479 Brassica carinata HOM05D008464 ORTHO05D011143 7.3e-48 194.1 144 77.1
BolC6t38268H Brassica oleracea HOM05D008464 ORTHO05D011143 7.3e-48 194.1 144 77.1
A09p16500 Brassica napus HOM05D008464 ORTHO05D011143 9.6e-24 114.0 143 49.7
BraA09t37288Z Brassica rapa HOM05D008464 ORTHO05D011143 9.6e-24 114.0 143 49.7
Sp2g02460 Schrenkiella parvula HOM05D008464 ORTHO05D011143 4.7e-23 111.7 120 54.2
Thhalv10023864m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 1.8e-22 109.8 109 53.2
A09p16470 Brassica napus HOM05D008464 ORTHO05D011143 2.9e-20 102.4 119 52.9
BraA09t37284Z Brassica rapa HOM05D008464 ORTHO05D011143 3.8e-20 102.1 119 52.9
Sp2g02420 Schrenkiella parvula HOM05D008464 ORTHO05D011143 1.9e-19 99.8 144 43.8
C09p20030 Brassica napus HOM05D008464 ORTHO05D011143 2.7e-18 95.9 119 49.6
BolC9t54911H Brassica oleracea HOM05D008464 ORTHO05D011143 2.7e-18 95.9 119 49.6
BraA09t37286Z Brassica rapa HOM05D008464 ORTHO05D011143 1.1e-16 90.5 148 51.4
A09p16490 Brassica napus HOM05D008464 ORTHO05D011143 1.9e-16 89.7 117 61.5
BcaB07g31304 Brassica carinata HOM05D008464 ORTHO05D011143 9.6e-16 87.4 119 46.2
BcaC04g22371 Brassica carinata HOM05D008464 ORTHO05D011143 9.6e-16 87.4 100 64.0
Thhalv10024101m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 3.6e-15 85.5 105 47.6
Sp2g02470 Schrenkiella parvula HOM05D008464 ORTHO05D011143 8.1e-15 84.3 144 49.3
BcaC04g22373 Brassica carinata HOM05D008464 ORTHO05D011143 1.4e-14 83.6 115 47.0
BcaC04g22374 Brassica carinata HOM05D008464 ORTHO05D011143 1.4e-14 83.6 115 47.0
Sp2g02400 Schrenkiella parvula HOM05D008464 ORTHO05D011143 1.4e-14 83.6 144 41.7
CARHR049900 Cardamine hirsuta HOM05D008464 ORTHO05D011143 3.1e-14 82.4 143 40.6
Sp2g02440 Schrenkiella parvula HOM05D008464 ORTHO05D011143 2.6e-13 79.3 141 36.9
C09p20050 Brassica napus HOM05D008464 ORTHO05D011143 2.2e-12 76.3 117 59.8
BolC9t54913H Brassica oleracea HOM05D008464 ORTHO05D011143 2.2e-12 76.3 117 59.8
BcaC04g22376 Brassica carinata HOM05D008464 ORTHO05D011143 1.4e-11 73.6 46 78.3
C09p15480 Brassica napus HOM05D012039 ORTHO05D021966 3.9e-09 65.5 183 26.8
BolC9t54454H Brassica oleracea HOM05D012039 ORTHO05D021966 3.9e-09 65.5 183 26.8
AT1G62000 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 1.5e-08 63.5 105 39.0
AT1G62225 Arabidopsis thaliana HOM05D008464 ORTHO05D011143 1.3e-07 60.5 119 40.3
Carub.0002s0278 Capsella rubella HOM05D008464 ORTHO05D011143 1.3e-07 60.5 104 43.3
AT1G62060 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 1.6e-07 60.1 105 40.0
AL2G14030 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 2.8e-07 59.3 65 53.8
AL2G14040 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 2.8e-07 59.3 65 53.8
AT1G62220 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 8.1e-07 57.8 120 36.7
BcaC04g22770 Brassica carinata HOM05D008464 ORTHO05D011143 1.8e-06 56.6 57 61.4
A09p13080 Brassica napus HOM05D008464 ORTHO05D011143 1.8e-06 56.6 57 61.4
C09p15490 Brassica napus HOM05D008464 ORTHO05D011143 1.8e-06 56.6 57 61.4
BolC9t54455H Brassica oleracea HOM05D008464 ORTHO05D011143 1.8e-06 56.6 57 61.4
BraA09t36952Z Brassica rapa HOM05D008464 ORTHO05D011143 1.8e-06 56.6 57 61.4
AL3G48150 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 3.1e-06 55.8 122 36.9
AT1G62080 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 3.1e-06 55.8 105 41.9
BraA09t36951Z Brassica rapa HOM05D012039 ORTHO05D021966 3.1e-06 55.8 196 24.5
Carub.0002s0281 Capsella rubella HOM05D008464 ORTHO05D014850 3.1e-06 55.8 65 49.2
BcaB07g31305 Brassica carinata HOM05D008464 ORTHO05D011143 4.0e-06 55.5 31 87.1
Sp2g02480 Schrenkiella parvula HOM05D012039 ORTHO05D021966 4.0e-06 55.5 162 27.2
Carub.0002s0279 Capsella rubella HOM05D008464 ORTHO05D014850 6.9e-06 54.7 65 47.7


User provided reference genes

Program Settings