Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p27720 Brassica napus HOM05D003274 ORTHO05D040491 6.6e-23 109.8 53 100.0
BraA02t07847Z Brassica rapa HOM05D003274 ORTHO05D040491 6.6e-23 109.8 53 100.0
A05p38550 Brassica napus HOM05D003274 ORTHO05D003714 1.3e-10 68.9 36 94.4
A07p21870 Brassica napus HOM05D003274 ORTHO05D003714 1.3e-10 68.9 36 94.4
A09p62530 Brassica napus HOM05D003274 ORTHO05D003714 1.3e-10 68.9 36 94.4
BraA01t03768Z Brassica rapa HOM05D003274 ORTHO05D003714 1.3e-10 68.9 36 94.4
Aqoxy2G01722 Aquilegia oxysepala HOM05D003274 ORTHO05D003714 5.1e-07 57.0 36 75.0
Glyma.04G151500 Glycine max HOM05D003274 ORTHO05D003714 5.1e-07 57.0 36 75.0
Glyma.06G211400 Glycine max HOM05D003274 ORTHO05D003714 5.1e-07 57.0 36 75.0
Phvul.011G085100 Phaseolus vulgaris HOM05D003274 ORTHO05D003714 5.1e-07 57.0 36 75.0
QL01p015396 Quercus lobata HOM05D003274 ORTHO05D003714 5.1e-07 57.0 36 75.0
VMungo1127G1114 Vigna mungo HOM05D003274 ORTHO05D003714 5.1e-07 57.0 36 75.0
SalBow4G3301 Salvia bowleyana HOM05D003274 ORTHO05D003714 8.7e-07 56.2 36 75.0
arahy.Tifrunner.gnm1.ann1.2XGG6Y Arachis hypogaea HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
arahy.Tifrunner.gnm1.ann1.A7H879 Arachis hypogaea HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
arahy.Tifrunner.gnm1.ann1.R6Y7HN Arachis hypogaea HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
arahy.Tifrunner.gnm1.ann1.RYV3A9 Arachis hypogaea HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Ca_19311_v3 Cicer arietinum L. HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Gohir.A10G202200 Gossypium hirsutum HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Gohir.D04G005200 Gossypium hirsutum HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Gohir.D10G210400 Gossypium hirsutum HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Gorai.011G235800 Gossypium raimondii HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Gorai.012G006500 Gossypium raimondii HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
HanXRQChr04g0103601 Helianthus annuus HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Lalb_Chr01g0004551 Lupinus albus HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Medtr4g057565 Medicago truncatula HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Nitab4.5_0001163g0120 Nicotiana tabacum HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Nitab4.5_0002001g0020 Nicotiana tabacum HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Psat7g149280 Pisum sativum HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Sed0002530 Sechium edule HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Thecc.09G349700 Theobroma cacao HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 75.0
TWI79G0911 Tripterygium wilfordii HOM05D003274 ORTHO05D003714 1.1e-06 55.8 36 72.2
Glyma.12G080000 Glycine max HOM05D003274 ORTHO05D003714 1.5e-06 55.5 36 72.2
Peaxi162Scf00892g00008 Petunia axillaris HOM05D003274 ORTHO05D003714 1.5e-06 55.5 35 74.3
DCAR_018775 Daucus carota HOM05D003274 ORTHO05D003714 1.9e-06 55.1 36 69.4
Lsat_1_v5_gn_6_44161 Lactuca sativa HOM05D003274 ORTHO05D003714 1.9e-06 55.1 36 69.4
Lalb_Chr03g0027661 Lupinus albus HOM05D003274 ORTHO05D003714 1.9e-06 55.1 36 69.4
BraA02t05701Z Brassica rapa HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 75.0
CSS0017437 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 69.4
CSS0044730 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 69.4
Dinv34732 Davidia involucrata HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 69.4
Nn2g13817 Nelumbo nucifera HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 69.4
Solyc06g074840.3 Solanum lycopersicum HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 69.4
Sopen06g031270 Solanum pennellii HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 69.4
PGSC0003DMG400007136 Solanum tuberosum HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 69.4
TWI63G1596 Tripterygium wilfordii HOM05D003274 ORTHO05D003714 2.5e-06 54.7 36 69.4
BNapus_Darmor_BZH_scaffold_38p00230 Brassica napus HOM05D003274 ORTHO05D003714 3.3e-06 54.3 35 77.1
C02p11410 Brassica napus HOM05D003274 ORTHO05D003714 3.3e-06 54.3 35 77.1
C09p53640 Brassica napus HOM05D003274 ORTHO05D003714 3.3e-06 54.3 36 75.0
BolC9t58239H Brassica oleracea HOM05D003274 ORTHO05D003714 3.3e-06 54.3 36 75.0
SGA_v2.0_scaffold277G46690 Striga asiatica HOM05D003274 ORTHO05D003714 3.3e-06 54.3 36 66.7
Aqoxy1G01133 Aquilegia oxysepala HOM05D003274 ORTHO05D003714 4.3e-06 53.9 36 69.4
Lj3g0011566 Lotus japonicus HOM05D003274 ORTHO05D003714 4.3e-06 53.9 36 69.4
MD01G1102500 Malus domestica HOM05D003274 ORTHO05D003714 5.6e-06 53.5 36 69.4
Lsat_1_v5_gn_1_62640 Lactuca sativa HOM05D003274 ORTHO05D003714 7.4e-06 53.1 36 66.7


User provided reference genes

Program Settings