Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 3.0e-235 818.1 418 100.0
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 1.8e-216 755.7 426 92.3
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.1e-205 719.9 418 90.2
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 3.9e-203 711.4 429 87.9
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 5.5e-197 691.0 419 87.6
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 1.6e-196 689.5 440 84.8
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 2.0e-191 672.5 418 84.9
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 8.5e-182 640.6 419 81.4
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 1.6e-180 636.3 419 79.7
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 1.0e-179 633.6 438 77.9
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 1.4e-179 633.3 417 81.1
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 1.4e-168 596.7 416 75.2
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 1.0e-155 553.9 418 74.2
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 2.7e-151 539.3 419 67.5
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 1.4e-131 473.8 429 59.9
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 7.6e-130 468.0 407 61.4
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 1.1e-128 464.2 415 60.2
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 7.1e-128 461.5 406 60.6
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 7.1e-128 461.5 414 58.7
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 1.7e-126 456.8 419 57.8
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 5.1e-126 455.3 418 57.4
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 6.6e-126 454.9 415 59.3
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 2.1e-124 449.9 427 56.9
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 1.8e-123 446.8 418 56.7
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 1.2e-122 444.1 408 58.6
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 2.6e-122 443.0 404 59.2
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 5.8e-122 441.8 417 57.8
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 7.6e-122 441.4 428 57.2
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 7.6e-122 441.4 420 57.6
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 9.9e-122 441.0 431 57.1
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.3e-121 440.7 417 57.8
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 3.8e-121 439.1 420 58.1
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 4.9e-121 438.7 406 59.1
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 1.4e-120 437.2 405 59.0
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 5.4e-120 435.3 397 59.4
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 5.1e-118 428.7 341 65.4
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 5.1e-118 428.7 438 55.3
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 1.1e-117 427.6 340 64.7
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 7.4e-117 424.9 405 57.3
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 1.4e-115 420.6 339 64.3
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 1.8e-115 420.2 404 56.4
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 2.4e-115 419.9 403 55.3
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 3.1e-115 419.5 343 64.1
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 1.2e-114 417.5 394 56.3
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 1.2e-114 417.5 416 53.6
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 1.2e-114 417.5 400 58.0
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 1.4e-112 410.6 354 62.7
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 4.2e-112 409.1 345 61.4
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 1.2e-111 407.5 423 54.1
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 1.6e-111 407.1 399 55.9
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 2.7e-111 406.4 324 64.5
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 2.3e-110 403.3 347 61.7
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 3.0e-110 402.9 343 60.6
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 5.1e-110 402.1 350 60.9
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 1.9e-109 400.2 394 53.8
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 3.7e-108 396.0 348 59.5
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 1.1e-107 394.4 334 62.0
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.8e-107 393.7 348 59.5
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 3.1e-107 392.9 348 58.3
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 6.9e-107 391.7 348 58.0
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 1.0e-105 387.9 347 58.5
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 4.2e-104 382.5 399 52.9
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 1.2e-103 380.9 340 58.5
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 2.1e-103 380.2 332 61.1
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 1.8e-102 377.1 335 59.4
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 1.8e-102 377.1 410 48.3
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 3.4e-98 362.8 408 49.0
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 6.5e-97 358.6 402 50.0
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 1.9e-96 357.1 308 60.7
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 1.8e-94 350.5 273 65.6
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 1.4e-91 340.9 382 53.4
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 4.1e-91 339.3 351 53.0
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 1.2e-90 337.8 420 48.1
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 6.1e-87 325.5 331 52.9
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 6.5e-81 305.4 244 64.3
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 1.4e-80 304.3 342 51.8
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 1.0e-78 298.1 350 47.7
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 5.7e-77 292.4 448 41.5
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 1.7e-76 290.8 214 68.2
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 8.2e-76 288.5 316 48.4
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 1.6e-74 284.3 324 49.7
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 1.3e-73 281.2 318 49.4
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 1.8e-67 260.8 316 47.5
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 9.1e-67 258.5 271 52.8
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 1.6e-66 257.7 207 61.4
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 4.2e-64 249.6 188 67.0
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 7.2e-64 248.8 299 48.2
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 1.2e-63 248.1 326 43.6
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 1.3e-60 238.0 188 67.0
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 2.0e-58 230.7 357 38.1
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 1.3e-57 228.0 344 39.8
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 4.4e-53 213.0 266 50.8
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 2.0e-45 187.6 140 68.6
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 3.4e-45 186.8 216 50.9
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.1e-35 155.2 118 70.3
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 3.0e-33 147.1 111 62.2
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 5.0e-33 146.4 124 60.5
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 3.6e-31 140.2 99 70.7
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 9.9e-29 132.1 251 35.5
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 3.2e-27 127.1 110 58.2
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 9.2e-27 125.6 346 29.5
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 1.2e-21 108.6 87 63.2
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 2.0e-21 107.8 106 53.8
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 6.4e-20 102.8 84 63.1
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 3.3e-16 90.5 337 25.5
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 5.2e-14 83.2 211 31.3
Haze_16199 Corylus avellana HOM05D007236 ORTHO05D009150 2.9e-12 77.4 146 36.3
Glyma.13G133400 Glycine max HOM05D001509 ORTHO05D001361 1.6e-07 61.6 215 25.6
THA.LOC104823250 Tarenaya hassleriana HOM05D001509 ORTHO05D001361 2.8e-07 60.8 226 23.0
AagrBONN_evm.TU.Sc2ySwM_117.1754 Anthoceros agrestis HOM05D001509 ORTHO05D001361 6.2e-07 59.7 205 21.5
Phvul.007G159400 Phaseolus vulgaris HOM05D001509 ORTHO05D001361 2.4e-06 57.8 190 27.4
arahy.Tifrunner.gnm1.ann1.AM6VYI Arachis hypogaea HOM05D001509 ORTHO05D001361 6.9e-06 56.2 182 24.7


User provided reference genes

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