Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 4.6e-36 154.1 79 100.0
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 4.6e-36 154.1 79 100.0
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 2.3e-35 151.8 79 98.7
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 5.1e-35 150.6 79 97.5
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 2.5e-34 148.3 78 97.4
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 1.6e-33 145.6 79 94.9
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 2.8e-33 144.8 79 93.7
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 2.8e-33 144.8 79 93.7
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 8.1e-33 143.3 79 93.7
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 8.1e-33 143.3 79 92.4
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 3.1e-32 141.4 79 89.9
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 8.9e-32 139.8 79 88.6
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 8.9e-32 139.8 79 88.6
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 8.9e-32 139.8 79 88.6
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 1.5e-31 139.0 79 91.1
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 8.4e-30 133.3 68 98.5
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 7.8e-28 126.7 79 83.5
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 3.3e-26 121.3 77 77.9
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 4.3e-26 120.9 79 77.2
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 4.3e-26 120.9 79 77.2
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 5.6e-26 120.6 79 77.2
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 5.6e-26 120.6 79 78.5
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 7.3e-26 120.2 79 78.5
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 1.2e-25 119.4 78 76.9
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 1.6e-25 119.0 79 73.4
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 2.1e-25 118.6 77 74.0
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 2.1e-25 118.6 79 75.9
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 2.8e-25 118.2 79 78.5
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 2.8e-25 118.2 79 77.2
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 2.8e-25 118.2 78 76.9
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 3.6e-25 117.9 79 77.2
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 3.6e-25 117.9 77 75.3
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 6.2e-25 117.1 79 77.2
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 6.2e-25 117.1 79 77.2
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 6.2e-25 117.1 79 75.9
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 1.1e-24 116.3 79 75.9
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 1.1e-24 116.3 77 75.3
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 1.1e-24 116.3 84 76.2
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 1.4e-24 115.9 78 73.1
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 2.4e-24 115.2 78 75.6
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 6.9e-24 113.6 79 77.2
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 6.9e-24 113.6 77 76.6
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 9.0e-24 113.2 79 72.2
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 1.2e-23 112.8 77 74.0
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 3.4e-23 111.3 74 77.0
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 7.6e-23 110.2 80 73.8
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 7.6e-23 110.2 77 71.4
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 9.9e-23 109.8 78 74.4
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 1.3e-22 109.4 81 71.6
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 2.2e-22 108.6 79 73.4
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 3.8e-22 107.8 79 68.4
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 3.8e-22 107.8 78 69.2
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 4.9e-22 107.5 90 66.7
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 4.9e-22 107.5 88 71.6
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 6.4e-22 107.1 80 72.5
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 1.1e-21 106.3 79 73.4
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 1.4e-21 105.9 80 71.2
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 3.2e-21 104.8 77 67.5
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 5.4e-21 104.0 79 69.6
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 9.3e-21 103.2 80 68.8
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 1.6e-20 102.4 82 65.9
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 2.7e-20 101.7 81 69.1
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 2.7e-20 101.7 75 72.0
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 4.6e-20 100.9 80 67.5
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 7.8e-20 100.1 80 65.0
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 7.8e-20 100.1 79 68.4
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.7e-19 99.0 81 65.4
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 1.7e-19 99.0 81 65.4
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 1.7e-19 99.0 82 69.5
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 1.7e-19 99.0 79 67.1
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 2.3e-19 98.6 83 67.5
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 5.1e-19 97.4 77 70.1
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 5.1e-19 97.4 77 68.8
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 6.6e-19 97.1 81 65.4
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.1e-18 96.3 81 61.7
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.5e-18 95.9 81 61.7
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.5e-18 95.9 81 61.7
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 1.9e-18 95.5 81 63.0
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 1.9e-18 95.5 80 63.8
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 1.9e-18 95.5 82 64.6
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 1.9e-18 95.5 82 64.6
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.3e-18 94.7 81 60.5
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 7.3e-18 93.6 81 60.5
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 7.3e-18 93.6 81 60.5
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 7.3e-18 93.6 81 60.5
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 7.3e-18 93.6 63 76.2
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.3e-17 92.8 81 60.5
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 2.1e-17 92.0 83 65.1
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 2.8e-17 91.7 90 58.9
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 3.6e-17 91.3 83 63.9
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 6.2e-17 90.5 90 57.8
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 6.9e-16 87.0 65 70.8
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 9.0e-16 86.7 90 58.9
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 2.6e-15 85.1 81 63.0
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 9.9e-15 83.2 73 60.3
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 2.9e-14 81.6 89 52.8
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 9.3e-13 76.6 96 49.0
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 4.6e-12 74.3 82 52.4
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 6.0e-12 73.9 47 80.9
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 8.1e-09 63.5 85 47.1
SMO145G0072 Selaginella moellendorffii HOM05D007547 ORTHO05D009590 1.8e-08 62.4 81 51.9
Duzib114G0968 Durio zibethinus HOM05D000021 ORTHO05D000010 2.2e-06 55.5 49 61.2


User provided reference genes

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