Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p25900 Brassica napus HOM05D008602 ORTHO05D013475 1.7e-117 426.0 216 100.0
BraA07t30237Z Brassica rapa HOM05D008602 ORTHO05D013475 8.5e-117 423.7 216 98.6
C06p28150 Brassica napus HOM05D008602 ORTHO05D013475 5.3e-111 404.4 216 94.9
BolC6t37981H Brassica oleracea HOM05D008602 ORTHO05D013475 5.3e-111 404.4 216 94.9
Thhalv10006384m.g Eutrema salsugineum HOM05D008602 ORTHO05D013475 5.5e-92 341.3 217 81.6
AL5G44930 Arabidopsis lyrata HOM05D008602 ORTHO05D013475 5.2e-90 334.7 216 78.2
AT3G62180 Arabidopsis thaliana HOM05D008602 ORTHO05D013475 2.0e-89 332.8 216 78.2
BcaB02g07346 Brassica carinata HOM05D008602 ORTHO05D013475 2.6e-89 332.4 216 80.1
Sp5g01200 Schrenkiella parvula HOM05D008602 ORTHO05D013475 2.2e-88 329.3 219 79.0
A04p00700 Brassica napus HOM05D008602 ORTHO05D024467 8.5e-85 317.4 204 78.4
BcaC07g40708 Brassica carinata HOM05D008602 ORTHO05D013475 2.5e-84 315.8 215 76.3
BraA04t15789Z Brassica rapa HOM05D008602 ORTHO05D024467 3.2e-84 315.5 204 77.9
CARHR172520 Cardamine hirsuta HOM05D008602 ORTHO05D013475 5.5e-84 314.7 218 74.8
BcaC02g10283 Brassica carinata HOM05D008602 ORTHO05D024467 2.7e-83 312.4 204 77.5
C04p30790 Brassica napus HOM05D008602 ORTHO05D024467 2.7e-83 312.4 204 77.5
BcaC07g40710 Brassica carinata HOM05D008602 ORTHO05D013475 6.1e-83 311.2 213 75.1
A09p54250 Brassica napus HOM05D008602 ORTHO05D013475 8.0e-83 310.8 213 74.6
BraA09t40837Z Brassica rapa HOM05D008602 ORTHO05D013475 8.0e-83 310.8 213 74.6
C08p37120 Brassica napus HOM05D008602 ORTHO05D013475 1.4e-82 310.1 213 74.6
BolC4t24598H Brassica oleracea HOM05D008602 ORTHO05D024467 1.4e-82 310.1 204 77.0
BolC8t51290H Brassica oleracea HOM05D008602 ORTHO05D013475 5.2e-82 308.1 213 74.2
Carub.0005s2891 Capsella rubella HOM05D008602 ORTHO05D013475 1.8e-79 299.7 190 77.9
BcaB06g29463 Brassica carinata HOM05D008602 ORTHO05D012039 2.0e-65 253.1 219 62.1
Sp4g29040 Schrenkiella parvula HOM05D008602 ORTHO05D012039 3.4e-65 252.3 219 61.2
Aa31LG1G28390 Aethionema arabicum HOM05D008602 ORTHO05D012039 4.4e-65 251.9 218 61.0
Aa31LG10G16140 Aethionema arabicum HOM05D000036 ORTHO05D000441 2.2e-64 249.6 200 65.0
A05p00750 Brassica napus HOM05D008602 ORTHO05D012039 2.2e-64 249.6 219 61.2
CARHR142410 Cardamine hirsuta HOM05D008602 ORTHO05D012039 8.3e-64 247.7 217 60.8
BraA05t19079Z Brassica rapa HOM05D008602 ORTHO05D012039 1.1e-63 247.3 219 60.7
BcaC01g05047 Brassica carinata HOM05D008602 ORTHO05D012039 1.9e-63 246.5 217 60.4
C03p30770 Brassica napus HOM05D008602 ORTHO05D012039 1.9e-63 246.5 217 60.4
BolC3t15427H Brassica oleracea HOM05D008602 ORTHO05D012039 1.9e-63 246.5 217 60.4
Thhalv10001629m.g Eutrema salsugineum HOM05D008602 ORTHO05D012039 1.9e-63 246.5 219 59.8
A03p25830 Brassica napus HOM05D008602 ORTHO05D012039 2.4e-63 246.1 217 60.4
BraA03t11797Z Brassica rapa HOM05D008602 ORTHO05D012039 2.4e-63 246.1 217 60.4
AT2G47050 Arabidopsis thaliana HOM05D008602 ORTHO05D012039 3.2e-63 245.7 219 60.3
AL4G46550 Arabidopsis lyrata HOM05D008602 ORTHO05D012039 9.2e-63 244.2 219 59.8
A04p34790 Brassica napus HOM05D008602 ORTHO05D012039 1.6e-62 243.4 217 59.9
BraA04t18934Z Brassica rapa HOM05D008602 ORTHO05D012039 1.6e-62 243.4 217 59.9
BcaC02g09027 Brassica carinata HOM05D008602 ORTHO05D012039 2.0e-62 243.0 219 59.4
C04p00910 Brassica napus HOM05D008602 ORTHO05D012039 2.0e-62 243.0 219 59.4
BolC4t21729H Brassica oleracea HOM05D008602 ORTHO05D012039 2.0e-62 243.0 219 59.4
C04p72560 Brassica napus HOM05D008602 ORTHO05D012039 4.6e-62 241.9 217 59.4
BolC4t28744H Brassica oleracea HOM05D008602 ORTHO05D012039 4.6e-62 241.9 217 59.4
Carub.0004s2979 Capsella rubella HOM05D008602 ORTHO05D012039 1.1e-60 237.3 219 57.5
THA.LOC104802122 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 1.6e-59 233.4 228 56.1
THA.LOC104827651 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 4.7e-59 231.9 229 57.2
THA.LOC104817438 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 1.5e-57 226.9 227 55.5
BcaB02g08120 Brassica carinata HOM05D000703 ORTHO05D000633 3.6e-43 179.1 144 67.4
A09p54240 Brassica napus HOM05D000036 ORTHO05D000441 2.9e-16 89.7 176 33.0
BraA09t40836Z Brassica rapa HOM05D000036 ORTHO05D000441 2.9e-16 89.7 176 33.0
BolC8t51289H Brassica oleracea HOM05D000036 ORTHO05D000441 4.9e-16 89.0 176 33.5
BcaC07g40707 Brassica carinata HOM05D000036 ORTHO05D000441 6.5e-16 88.6 176 33.0
C08p37110 Brassica napus HOM05D000036 ORTHO05D000441 6.5e-16 88.6 176 33.0
Carub.0004s2977 Capsella rubella HOM05D000036 ORTHO05D000441 3.2e-15 86.3 213 29.1
Carub.0004s2978 Capsella rubella HOM05D000036 ORTHO05D000441 3.2e-15 86.3 202 30.2
Thhalv10001369m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 5.5e-15 85.5 202 30.2
Sp4g29030 Schrenkiella parvula HOM05D000036 ORTHO05D000441 5.5e-15 85.5 202 30.2
BcaB02g07347 Brassica carinata HOM05D000036 ORTHO05D000441 9.3e-15 84.7 166 33.1
BcaC02g10282 Brassica carinata HOM05D000036 ORTHO05D000441 9.3e-15 84.7 166 31.9
A04p00710 Brassica napus HOM05D000036 ORTHO05D000441 9.3e-15 84.7 166 31.9
A05p00770 Brassica napus HOM05D000036 ORTHO05D000441 9.3e-15 84.7 201 29.9
C04p30810 Brassica napus HOM05D000036 ORTHO05D000441 9.3e-15 84.7 166 31.9
BolC4t24601H Brassica oleracea HOM05D000036 ORTHO05D000441 9.3e-15 84.7 166 31.9
BraA05t19080Z Brassica rapa HOM05D000036 ORTHO05D000441 9.3e-15 84.7 201 29.9
AL5G44920 Arabidopsis lyrata HOM05D000036 ORTHO05D000441 1.2e-14 84.3 166 33.1
AT2G47040 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 1.2e-14 84.3 207 30.0
BcaB02g08121 Brassica carinata HOM05D000036 ORTHO05D000441 1.2e-14 84.3 166 32.5
BcaB06g29464 Brassica carinata HOM05D000036 ORTHO05D000441 1.2e-14 84.3 169 32.0
Thhalv10005855m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 1.2e-14 84.3 166 31.9
A04p34780 Brassica napus HOM05D000036 ORTHO05D000441 1.6e-14 84.0 201 29.4
C04p72550 Brassica napus HOM05D000036 ORTHO05D000441 1.6e-14 84.0 201 29.4
BolC4t28743H Brassica oleracea HOM05D000036 ORTHO05D000441 1.6e-14 84.0 201 29.4
BraA04t18933Z Brassica rapa HOM05D000036 ORTHO05D000441 1.6e-14 84.0 201 29.4
BraA04t15791Z Brassica rapa HOM05D000036 ORTHO05D000441 2.1e-14 83.6 166 31.3
Carub.0005s2890 Capsella rubella HOM05D000036 ORTHO05D000441 2.1e-14 83.6 168 31.5
CARHR172510 Cardamine hirsuta HOM05D000036 ORTHO05D000441 2.1e-14 83.6 179 32.4
Sp5g01210 Schrenkiella parvula HOM05D000036 ORTHO05D000441 2.7e-14 83.2 166 31.9
A07p25890 Brassica napus HOM05D000036 ORTHO05D000441 4.6e-14 82.4 166 31.9
C06p28140 Brassica napus HOM05D000036 ORTHO05D000441 4.6e-14 82.4 166 32.5
BolC6t37980H Brassica oleracea HOM05D000036 ORTHO05D000441 4.6e-14 82.4 166 32.5
BraA07t30236Z Brassica rapa HOM05D000036 ORTHO05D000441 4.6e-14 82.4 166 31.9
AT3G62170 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 7.9e-14 81.6 166 32.5
BcaB01g03192 Brassica carinata HOM05D000036 ORTHO05D000441 1.0e-13 81.3 170 32.4
AT2G47030 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 3.0e-13 79.7 220 28.6
CARHR142400 Cardamine hirsuta HOM05D000036 ORTHO05D000441 4.3e-12 75.9 201 30.3
THA.LOC104817436 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 1.3e-11 74.3 161 32.3
C04p00930 Brassica napus HOM05D000036 ORTHO05D000441 1.6e-11 73.9 201 28.4
BolC4t21731H Brassica oleracea HOM05D000036 ORTHO05D000441 1.6e-11 73.9 201 28.4
AL4G46540 Arabidopsis lyrata HOM05D008602 ORTHO05D000441 2.1e-11 73.6 202 27.7
Cpa.g.sc41.94 Carica papaya HOM05D000036 ORTHO05D000441 2.8e-11 73.2 179 26.8
BcaC01g05049 Brassica carinata HOM05D000036 ORTHO05D000441 1.1e-10 71.2 202 28.2
C03p30760 Brassica napus HOM05D000036 ORTHO05D000441 1.1e-10 71.2 202 28.2
BolC3t15426H Brassica oleracea HOM05D000036 ORTHO05D000441 1.8e-10 70.5 202 28.2
A03p25820 Brassica napus HOM05D000036 ORTHO05D000441 2.4e-10 70.1 202 28.2
BraA03t11796Z Brassica rapa HOM05D000036 ORTHO05D000441 2.4e-10 70.1 202 28.2
THA.LOC104802121 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 9.0e-10 68.2 190 28.9
Aa31LG1G28380 Aethionema arabicum HOM05D002601 ORTHO05D002884 1.7e-08 63.9 200 27.5
Sed0002581 Sechium edule HOM05D000036 ORTHO05D000441 1.2e-06 57.8 169 28.4
Manes.07G013500 Manihot esculenta HOM05D000036 ORTHO05D000441 4.6e-06 55.8 216 26.4
ClCG11G000200 Citrullus lanatus HOM05D000036 ORTHO05D000441 7.9e-06 55.1 184 27.2


User provided reference genes

Program Settings