Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p25370 Brassica napus HOM05D007747 ORTHO05D009997 4.5e-35 150.6 71 100.0
A07p25380 Brassica napus HOM05D007747 ORTHO05D009997 4.5e-35 150.6 71 100.0
BraA07t30182Z Brassica rapa HOM05D007747 ORTHO05D009997 4.5e-35 150.6 71 100.0
C06p27210 Brassica napus HOM05D007747 ORTHO05D009997 4.3e-33 144.1 71 95.8
C06p27220 Brassica napus HOM05D007747 ORTHO05D009997 4.3e-33 144.1 71 95.8
C06p27240 Brassica napus HOM05D007747 ORTHO05D009997 1.2e-32 142.5 71 94.4
C06p27250 Brassica napus HOM05D007747 ORTHO05D009997 6.1e-32 140.2 71 93.0
BolC6t37896H Brassica oleracea HOM05D007747 ORTHO05D009997 1.4e-31 139.0 71 93.0
C06p27260 Brassica napus HOM05D007747 ORTHO05D009997 4.0e-31 137.5 71 91.5
BraA07t30179Z Brassica rapa HOM05D007747 ORTHO05D009997 5.6e-25 117.1 56 100.0
BraA07t30180Z Brassica rapa HOM05D007747 ORTHO05D009997 1.3e-21 105.9 72 70.8
BolC6t37892H Brassica oleracea HOM05D007747 ORTHO05D009997 1.9e-20 102.1 72 66.7
BcaC08g45110 Brassica carinata HOM05D007747 ORTHO05D009997 2.0e-14 82.0 74 58.1
C06p27200 Brassica napus HOM05D007747 ORTHO05D009997 2.0e-14 82.0 74 58.1
Sp5g02207 Schrenkiella parvula HOM05D007747 ORTHO05D009997 4.4e-14 80.9 74 58.1
A07p25360 Brassica napus HOM05D007747 ORTHO05D009997 5.8e-14 80.5 74 58.1
C06p27180 Brassica napus HOM05D007747 ORTHO05D009997 5.8e-14 80.5 56 60.7
BraA07t30181Z Brassica rapa HOM05D007747 ORTHO05D009997 5.8e-14 80.5 74 58.1
Thhalv10029330m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 9.9e-14 79.7 74 55.4
A09p53230 Brassica napus HOM05D007747 ORTHO05D009997 8.3e-13 76.6 72 55.6
BcaC07g40620 Brassica carinata HOM05D007747 ORTHO05D009997 2.4e-12 75.1 72 55.6
C08p36030 Brassica napus HOM05D007747 ORTHO05D009997 3.2e-12 74.7 72 55.6
BcaB02g08951 Brassica carinata HOM05D007747 ORTHO05D009997 4.1e-12 74.3 74 56.8
BolC4t22310H Brassica oleracea HOM05D007747 ORTHO05D009997 4.1e-12 74.3 74 56.8
C06p27230 Brassica napus HOM05D007747 ORTHO05D009997 5.4e-12 73.9 65 56.9
A04p01250 Brassica napus HOM05D007747 ORTHO05D009997 9.2e-12 73.2 71 52.1
BraA04t15844Z Brassica rapa HOM05D007747 ORTHO05D009997 9.2e-12 73.2 71 52.1
A05p05960 Brassica napus HOM05D007747 ORTHO05D009997 1.2e-11 72.8 74 55.4
BraA05t19559Z Brassica rapa HOM05D007747 ORTHO05D009997 1.2e-11 72.8 74 55.4
BolC4t24705H Brassica oleracea HOM05D007747 ORTHO05D009997 2.7e-11 71.6 71 50.7
Thhalv10003401m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 6.0e-11 70.5 71 50.7
AT3G43505 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 3.0e-10 68.2 77 49.4
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 3.9e-10 67.8 76 50.0
AT3G61175 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 3.9e-10 67.8 78 47.4
AL5G21440 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 8.6e-10 66.6 77 46.8
Carub.0230s0002 Capsella rubella HOM05D007747 ORTHO05D009997 1.5e-09 65.9 76 46.1
Carub.0002s0802 Capsella rubella HOM05D007747 ORTHO05D009997 3.3e-09 64.7 75 48.0
AT3G61177 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 4.3e-09 64.3 76 46.1
AL2G27660 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.1e-08 62.0 73 49.3
BraA07t30680Z Brassica rapa HOM05D007747 ORTHO05D009997 4.7e-08 60.8 80 43.8
AL5G21430 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 8.1e-08 60.1 73 49.3
Thhalv10006351m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 8.1e-08 60.1 75 45.3
A04p01260 Brassica napus HOM05D007747 ORTHO05D028248 1.8e-07 58.9 78 43.6
BraA04t15845Z Brassica rapa HOM05D007747 ORTHO05D028248 1.8e-07 58.9 78 43.6
Carub.0001s1284 Capsella rubella HOM05D007747 ORTHO05D009997 3.1e-07 58.2 74 44.6
AL5G43440 Arabidopsis lyrata HOM05D007747 ORTHO05D014853 5.2e-07 57.4 74 48.6
A07p30430 Brassica napus HOM05D007747 ORTHO05D009997 5.2e-07 57.4 80 41.2
C04p31610 Brassica napus HOM05D007747 ORTHO05D028248 6.8e-07 57.0 78 42.3
BolC4t24708H Brassica oleracea HOM05D007747 ORTHO05D028248 6.8e-07 57.0 78 42.3
BcaC08g45800 Brassica carinata HOM05D007747 ORTHO05D009997 1.2e-06 56.2 74 40.5
Carub.0002s1314 Capsella rubella HOM05D007747 ORTHO05D009997 1.2e-06 56.2 76 44.7
Thhalv10017941m.g Eutrema salsugineum HOM05D007747 ORTHO05D014853 1.5e-06 55.8 72 38.9
Carub.0005s0920 Capsella rubella HOM05D007747 ORTHO05D009997 2.6e-06 55.1 65 44.6
A07p30900 Brassica napus HOM05D007747 ORTHO05D009997 3.4e-06 54.7 74 39.2
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 3.4e-06 54.7 76 42.1
AT3G61182 Arabidopsis thaliana HOM05D007747 ORTHO05D014853 4.4e-06 54.3 77 45.5
C06p35890 Brassica napus HOM05D007747 ORTHO05D009997 4.4e-06 54.3 74 39.2
BraA07t30726Z Brassica rapa HOM05D007747 ORTHO05D009997 4.4e-06 54.3 74 39.2
Carub.0002s0801 Capsella rubella HOM05D007747 ORTHO05D009997 4.4e-06 54.3 53 54.7
AT3G20993 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 5.8e-06 53.9 76 46.1
BcaB06g28203 Brassica carinata HOM05D007747 ORTHO05D024130 5.8e-06 53.9 75 38.7
Carub.0001s3631 Capsella rubella HOM05D007747 ORTHO05D014853 7.6e-06 53.5 74 39.2
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 9.9e-06 53.1 76 40.8


User provided reference genes

Program Settings