Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p25360 Brassica napus HOM05D007747 ORTHO05D009997 3.5e-38 161.0 74 100.0
BraA07t30181Z Brassica rapa HOM05D007747 ORTHO05D009997 3.5e-38 161.0 74 100.0
BcaC08g45110 Brassica carinata HOM05D007747 ORTHO05D009997 2.3e-37 158.3 74 98.6
C06p27200 Brassica napus HOM05D007747 ORTHO05D009997 2.3e-37 158.3 74 98.6
C06p27230 Brassica napus HOM05D007747 ORTHO05D009997 1.4e-31 139.0 65 98.5
Sp5g02207 Schrenkiella parvula HOM05D007747 ORTHO05D009997 4.4e-25 117.5 74 74.3
BcaB02g08951 Brassica carinata HOM05D007747 ORTHO05D009997 4.2e-23 110.9 74 74.3
BolC4t22310H Brassica oleracea HOM05D007747 ORTHO05D009997 1.0e-21 106.3 74 71.6
Thhalv10029330m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 3.9e-21 104.4 74 66.2
A05p05960 Brassica napus HOM05D007747 ORTHO05D009997 1.5e-20 102.4 74 70.3
BraA05t19559Z Brassica rapa HOM05D007747 ORTHO05D009997 1.5e-20 102.4 74 70.3
A09p53230 Brassica napus HOM05D007747 ORTHO05D009997 3.6e-19 97.8 72 62.5
BcaC07g40620 Brassica carinata HOM05D007747 ORTHO05D009997 1.2e-17 92.8 72 59.7
C08p36030 Brassica napus HOM05D007747 ORTHO05D009997 1.5e-17 92.4 72 59.7
BraA07t30680Z Brassica rapa HOM05D007747 ORTHO05D009997 3.4e-17 91.3 80 57.5
Thhalv10003401m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 5.8e-17 90.5 71 56.3
BcaC02g12161 Brassica carinata HOM05D007747 ORTHO05D009997 2.9e-16 88.2 60 68.3
A07p30430 Brassica napus HOM05D007747 ORTHO05D009997 4.9e-16 87.4 80 55.0
A04p01260 Brassica napus HOM05D007747 ORTHO05D028248 5.4e-15 84.0 78 55.1
BolC6t37892H Brassica oleracea HOM05D007747 ORTHO05D009997 5.4e-15 84.0 74 60.8
BraA04t15845Z Brassica rapa HOM05D007747 ORTHO05D028248 5.4e-15 84.0 78 55.1
BraA07t30180Z Brassica rapa HOM05D007747 ORTHO05D009997 5.4e-15 84.0 74 62.2
Carub.0002s0802 Capsella rubella HOM05D007747 ORTHO05D009997 7.1e-15 83.6 76 56.6
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 9.3e-15 83.2 76 56.6
C06p27260 Brassica napus HOM05D007747 ORTHO05D009997 9.3e-15 83.2 74 59.5
BolC6t37896H Brassica oleracea HOM05D007747 ORTHO05D009997 9.3e-15 83.2 74 59.5
C04p31610 Brassica napus HOM05D007747 ORTHO05D028248 2.1e-14 82.0 78 53.8
BolC4t24708H Brassica oleracea HOM05D007747 ORTHO05D028248 2.1e-14 82.0 78 53.8
AT3G61175 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 2.7e-14 81.6 78 53.8
AT3G61177 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 2.7e-14 81.6 76 53.9
A07p25370 Brassica napus HOM05D007747 ORTHO05D009997 3.5e-14 81.3 74 58.1
A07p25380 Brassica napus HOM05D007747 ORTHO05D009997 3.5e-14 81.3 74 58.1
BraA07t30182Z Brassica rapa HOM05D007747 ORTHO05D009997 3.5e-14 81.3 74 58.1
C06p27210 Brassica napus HOM05D007747 ORTHO05D009997 1.3e-13 79.3 74 58.1
C06p27220 Brassica napus HOM05D007747 ORTHO05D009997 1.3e-13 79.3 74 58.1
C06p27240 Brassica napus HOM05D007747 ORTHO05D009997 1.3e-13 79.3 74 58.1
C04p06880 Brassica napus HOM05D007747 ORTHO05D009997 1.8e-13 79.0 54 66.7
AL2G27660 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.3e-13 78.6 72 52.8
BolC4t24705H Brassica oleracea HOM05D007747 ORTHO05D009997 3.0e-13 78.2 71 46.5
A04p01250 Brassica napus HOM05D007747 ORTHO05D009997 6.7e-13 77.0 71 46.5
C06p27250 Brassica napus HOM05D007747 ORTHO05D009997 6.7e-13 77.0 74 56.8
BraA04t15844Z Brassica rapa HOM05D007747 ORTHO05D009997 6.7e-13 77.0 71 46.5
Thhalv10006351m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 4.3e-12 74.3 74 48.6
Carub.0002s1314 Capsella rubella HOM05D007747 ORTHO05D009997 5.6e-12 73.9 78 48.7
Carub.0001s1284 Capsella rubella HOM05D007747 ORTHO05D009997 9.6e-12 73.2 78 53.8
Carub.0230s0002 Capsella rubella HOM05D007747 ORTHO05D009997 3.7e-11 71.2 76 47.4
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 4.8e-11 70.9 76 46.1
AL5G21440 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 1.8e-10 68.9 79 46.8
BolC8t51184H Brassica oleracea HOM05D007747 ORTHO05D009997 1.8e-10 68.9 51 52.9
BcaB03g15568 Brassica carinata HOM05D007747 ORTHO05D009997 4.0e-10 67.8 74 44.6
BraA07t30179Z Brassica rapa HOM05D007747 ORTHO05D009997 4.0e-10 67.8 57 61.4
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 4.0e-10 67.8 77 49.4
AT3G20997 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 6.9e-10 67.0 75 48.0
BcaC08g45800 Brassica carinata HOM05D007747 ORTHO05D009997 6.9e-10 67.0 74 43.2
AL5G21430 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 1.2e-09 66.2 73 49.3
AL807U10010 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 1.2e-09 66.2 75 48.0
AT3G20993 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 1.2e-09 66.2 76 47.4
C06p27180 Brassica napus HOM05D007747 ORTHO05D009997 1.2e-09 66.2 56 55.4
AT3G43505 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 1.5e-09 65.9 79 44.3
BcaB06g28203 Brassica carinata HOM05D007747 ORTHO05D024130 1.5e-09 65.9 76 46.1
A07p18970 Brassica napus HOM05D007747 ORTHO05D024130 2.0e-09 65.5 83 43.4
A07p30900 Brassica napus HOM05D007747 ORTHO05D009997 2.0e-09 65.5 74 41.9
BraA07t29602Z Brassica rapa HOM05D007747 ORTHO05D024130 2.0e-09 65.5 83 43.4
C06p35890 Brassica napus HOM05D007747 ORTHO05D009997 2.6e-09 65.1 74 41.9
BraA07t30726Z Brassica rapa HOM05D007747 ORTHO05D009997 2.6e-09 65.1 74 41.9
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 2.6e-09 65.1 76 43.4
Thhalv10017941m.g Eutrema salsugineum HOM05D007747 ORTHO05D014853 2.6e-09 65.1 72 41.7
C06p35910 Brassica napus HOM05D007747 ORTHO05D009997 4.5e-09 64.3 74 47.3
A07p30920 Brassica napus HOM05D007747 ORTHO05D009997 5.8e-09 63.9 74 47.3
BolC4t23792H Brassica oleracea HOM05D007747 ORTHO05D024130 1.0e-08 63.2 83 42.2
Carub.0001s3631 Capsella rubella HOM05D007747 ORTHO05D014853 1.0e-08 63.2 76 48.7
C04p22980 Brassica napus HOM05D007747 ORTHO05D024130 1.7e-08 62.4 83 42.2
Carub.0001s1285 Capsella rubella HOM05D007747 ORTHO05D009997 2.2e-08 62.0 77 46.8
Carub.0002s0801 Capsella rubella HOM05D007747 ORTHO05D009997 6.5e-08 60.5 48 58.3
Carub.0005s0920 Capsella rubella HOM05D007747 ORTHO05D009997 3.2e-07 58.2 67 43.3
BcaB06g29617 Brassica carinata HOM05D016272 ORTHO05D014853 5.5e-07 57.4 78 41.0
AT3G61182 Arabidopsis thaliana HOM05D007747 ORTHO05D014853 7.1e-07 57.0 77 44.2
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 7.1e-07 57.0 77 42.9
Carub.0005s2785 Capsella rubella HOM05D007747 ORTHO05D014853 9.3e-07 56.6 73 43.8
CARHR171480 Cardamine hirsuta HOM05D007747 ORTHO05D009997 2.7e-06 55.1 54 44.4
AL5G43440 Arabidopsis lyrata HOM05D007747 ORTHO05D014853 6.0e-06 53.9 74 45.9
BcaB07g30795 Brassica carinata HOM05D009342 ORTHO05D012604 6.0e-06 53.9 78 37.2
C04p55820 Brassica napus HOM05D016272 ORTHO05D014853 7.9e-06 53.5 75 38.7


User provided reference genes

Program Settings