Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p24390 Brassica napus HOM05D000689 ORTHO05D000015 2.1e-52 208.8 104 100.0
BraA07t30086Z Brassica rapa HOM05D000689 ORTHO05D000015 3.0e-35 151.8 101 75.2
BcaB02g07493 Brassica carinata HOM05D000689 ORTHO05D000015 1.5e-34 149.4 100 72.0
BcaB02g07494 Brassica carinata HOM05D000689 ORTHO05D000015 1.9e-34 149.1 102 73.5
Thhalv10005932m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.9e-34 149.1 100 71.0
A07p24400 Brassica napus HOM05D000689 ORTHO05D000015 7.4e-34 147.1 101 72.3
BcaC08g44949 Brassica carinata HOM05D000689 ORTHO05D000015 2.8e-33 145.2 102 73.5
C06p25800 Brassica napus HOM05D000689 ORTHO05D000015 2.8e-33 145.2 102 73.5
BcaB04g20733 Brassica carinata HOM05D000689 ORTHO05D000015 3.7e-33 144.8 100 69.0
BcaB02g07492 Brassica carinata HOM05D000689 ORTHO05D000015 1.8e-32 142.5 102 71.6
BcaC09g48858 Brassica carinata HOM05D000689 ORTHO05D000015 1.8e-32 142.5 100 68.0
C01p45120 Brassica napus HOM05D000689 ORTHO05D000015 1.8e-32 142.5 100 68.0
BolC1t04483H Brassica oleracea HOM05D000689 ORTHO05D000015 1.8e-32 142.5 100 68.0
BraA07t30087Z Brassica rapa HOM05D000689 ORTHO05D000015 3.1e-32 141.7 101 69.3
C06p25810 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-31 139.4 101 69.3
C06p25830 Brassica napus HOM05D000689 ORTHO05D000015 3.4e-31 138.3 104 71.2
BolC6t37744H Brassica oleracea HOM05D000689 ORTHO05D000015 3.4e-31 138.3 104 71.2
C06p25780 Brassica napus HOM05D000689 ORTHO05D000015 1.0e-30 136.7 100 68.0
BolC6t37740H Brassica oleracea HOM05D000689 ORTHO05D000015 1.0e-30 136.7 100 68.0
Thhalv10005926m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.0e-30 136.7 100 66.0
AL5G40610 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.9e-30 135.2 100 63.0
BcaB06g25716 Brassica carinata HOM05D000689 ORTHO05D000015 2.9e-30 135.2 101 67.3
Sp5g03990 Schrenkiella parvula HOM05D000689 ORTHO05D000015 3.8e-30 134.8 100 64.0
CARHR169340 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.4e-29 132.9 100 61.0
AL5G40790 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.5e-29 132.1 100 63.0
Thhalv10028613m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 7.1e-29 130.6 100 64.0
AT3G58820 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.5e-28 128.3 100 59.0
Carub.0007s3762 Capsella rubella HOM05D000689 ORTHO05D000015 4.6e-28 127.9 101 61.4
AL7G52200 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.0e-27 126.7 100 60.0
BcaC02g08646 Brassica carinata HOM05D000689 ORTHO05D000015 1.8e-27 125.9 101 61.4
AL7G52210 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.9e-27 124.8 101 60.4
BcaC01g05915 Brassica carinata HOM05D000689 ORTHO05D000015 1.1e-26 123.2 101 62.4
CARHR217330 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.5e-26 122.9 100 58.0
AT5G38390 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.3e-26 121.3 100 61.0
AL5G40830 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.7e-26 120.9 99 55.6
AT3G59000 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 7.4e-26 120.6 99 54.5
BcaB01g03988 Brassica carinata HOM05D000689 ORTHO05D000015 1.6e-25 119.4 101 60.4
Carub.0007s3768 Capsella rubella HOM05D000689 ORTHO05D000015 2.1e-25 119.0 101 58.4
C04p51750 Brassica napus HOM05D000689 ORTHO05D000015 4.8e-25 117.9 92 59.8
BolC4t26753H Brassica oleracea HOM05D000689 ORTHO05D000015 4.8e-25 117.9 92 59.8
Carub.0005s2595 Capsella rubella HOM05D000689 ORTHO05D000015 6.2e-25 117.5 99 56.6
CARHR136780 Cardamine hirsuta HOM05D000689 ORTHO05D000015 6.2e-25 117.5 101 56.4
AL7G52190 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.1e-24 116.7 100 56.0
BcaC01g05912 Brassica carinata HOM05D000689 ORTHO05D000015 1.1e-24 116.7 101 58.4
A03p18110 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-24 116.7 101 58.4
C03p21140 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-24 116.7 101 58.4
BolC3t14497H Brassica oleracea HOM05D000689 ORTHO05D000015 1.1e-24 116.7 101 58.4
BraA03t11070Z Brassica rapa HOM05D000689 ORTHO05D000015 1.1e-24 116.7 101 58.4
Carub.0007s3169 Capsella rubella HOM05D000689 ORTHO05D000015 1.1e-24 116.7 101 56.4
AT3G03040 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.4e-24 116.3 105 58.1
BcaC07g40304 Brassica carinata HOM05D000689 ORTHO05D000015 1.8e-24 115.9 100 54.0
Carub.0005s2560 Capsella rubella HOM05D000689 ORTHO05D000015 1.8e-24 115.9 100 57.0
AL4G18900 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.4e-24 115.5 98 58.2
Carub.0007s3170 Capsella rubella HOM05D000689 ORTHO05D000015 2.4e-24 115.5 101 55.4
A09p56580 Brassica napus HOM05D000689 ORTHO05D000015 3.1e-24 115.2 101 56.4
BraA09t41049Z Brassica rapa HOM05D000689 ORTHO05D000015 3.1e-24 115.2 101 56.4
AL5G40730 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.3e-24 114.4 98 57.1
C08p39530 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-23 112.8 101 55.4
BolC8t51526H Brassica oleracea HOM05D000689 ORTHO05D000015 1.5e-23 112.8 101 55.4
BolC8t51017H Brassica oleracea HOM05D000689 ORTHO05D000015 2.0e-23 112.5 100 52.0
BcaC07g40959 Brassica carinata HOM05D000689 ORTHO05D000015 3.4e-23 111.7 101 54.5
AT1G52650 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.5e-23 111.3 100 53.0
AT5G38396 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.5e-23 111.3 100 56.0
CARHR169400 Cardamine hirsuta HOM05D000689 ORTHO05D000015 7.6e-23 110.5 99 54.5
C08p34200 Brassica napus HOM05D000689 ORTHO05D000015 2.2e-22 109.0 100 52.0
BcaB02g09030 Brassica carinata HOM05D000689 ORTHO05D000015 2.9e-22 108.6 103 56.3
AL5G40710 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.8e-22 108.2 100 53.0
Carub.0003s0219 Capsella rubella HOM05D000689 ORTHO05D000015 3.8e-22 108.2 102 54.9
AL4G18910 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.0e-22 107.8 99 54.5
AL5G40750 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.5e-22 107.5 99 51.5
AT4G13960 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.9e-21 105.9 100 50.0
AT3G58930 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 5.5e-21 104.4 98 52.0
AL7G52220 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 9.3e-21 103.6 99 49.5
BNapus_Darmor_BZH_scaffold_129p00070 Brassica napus HOM05D000689 ORTHO05D000015 9.3e-21 103.6 103 50.5
Carub.0007s3765 Capsella rubella HOM05D000689 ORTHO05D000015 1.2e-20 103.2 101 54.5
AL3G12540 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.6e-20 102.8 101 53.5
CARHR051200 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.1e-20 102.4 100 49.0
AT5G38386 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.7e-20 102.1 101 52.5
BolC1t05853H Brassica oleracea HOM05D000689 ORTHO05D000015 2.7e-20 102.1 103 49.5
Thhalv10005914m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.7e-20 102.1 89 59.6
AT3G03030 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.6e-20 101.3 101 52.5
BcaC07g40231 Brassica carinata HOM05D000689 ORTHO05D000015 4.6e-20 101.3 102 50.0
BraA01t04598Z Brassica rapa HOM05D000689 ORTHO05D000015 4.6e-20 101.3 101 50.5
CARHR169310 Cardamine hirsuta HOM05D000689 ORTHO05D000015 4.6e-20 101.3 98 52.0
Thhalv10006398m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 7.9e-20 100.5 104 48.1
BolC8t51015H Brassica oleracea HOM05D000689 ORTHO05D000015 1.0e-19 100.1 100 50.0
Thhalv10022609m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.0e-19 100.1 83 57.8
BraA09t40579Z Brassica rapa HOM05D000689 ORTHO05D000015 1.3e-19 99.8 100 49.0
Carub.0005s2568 Capsella rubella HOM05D000689 ORTHO05D000015 1.3e-19 99.8 98 50.0
Carub.0007s3423 Capsella rubella HOM05D000689 ORTHO05D000015 1.3e-19 99.8 87 57.5
AL3G12550 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.8e-19 99.4 85 61.2
Carub.0003s0218 Capsella rubella HOM05D000689 ORTHO05D000015 1.8e-19 99.4 102 52.0
AT3G58940 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.0e-19 98.6 83 55.4
BcaC01g02904 Brassica carinata HOM05D000689 ORTHO05D000015 3.0e-19 98.6 82 57.3
BcaC05g28862 Brassica carinata HOM05D000689 ORTHO05D000015 3.0e-19 98.6 82 57.3
C03p58550 Brassica napus HOM05D000689 ORTHO05D000015 3.0e-19 98.6 82 57.3
BolC3t18116H Brassica oleracea HOM05D000689 ORTHO05D000015 3.0e-19 98.6 82 57.3
AT3G58950 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.9e-19 98.2 101 48.5
BcaB04g21388 Brassica carinata HOM05D000689 ORTHO05D000015 3.9e-19 98.2 101 49.5
BraA06t26311Z Brassica rapa HOM05D000689 ORTHO05D000015 6.7e-19 97.4 83 56.6
BcaC07g40302 Brassica carinata HOM05D000689 ORTHO05D000015 8.7e-19 97.1 100 49.0
A06p33670 Brassica napus HOM05D000689 ORTHO05D000015 8.7e-19 97.1 83 55.4
C08p34170 Brassica napus HOM05D000689 ORTHO05D000015 8.7e-19 97.1 100 49.0
BraA06t26301Z Brassica rapa HOM05D000689 ORTHO05D000015 1.1e-18 96.7 83 55.4
BcaB08g34757 Brassica carinata HOM05D000689 ORTHO05D000015 3.3e-18 95.1 82 54.9
A06p33660 Brassica napus HOM05D000689 ORTHO05D000015 3.3e-18 95.1 85 54.1
CARHR169280 Cardamine hirsuta HOM05D000689 ORTHO05D000015 3.3e-18 95.1 98 46.9
AL5G40700 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 4.3e-18 94.7 83 54.2
BcaC02g12147 Brassica carinata HOM05D000689 ORTHO05D000015 5.7e-18 94.4 106 51.9
A06p33650 Brassica napus HOM05D000689 ORTHO05D000015 5.7e-18 94.4 85 54.1
C04p07060 Brassica napus HOM05D000689 ORTHO05D000015 5.7e-18 94.4 106 51.9
BolC4t22331H Brassica oleracea HOM05D000689 ORTHO05D000015 5.7e-18 94.4 106 51.9
A06p33760 Brassica napus HOM05D000689 ORTHO05D000015 7.4e-18 94.0 82 57.3
CARHR214180 Cardamine hirsuta HOM05D000689 ORTHO05D000015 7.4e-18 94.0 79 58.2
C04p51740 Brassica napus HOM05D000689 ORTHO05D000015 1.3e-17 93.2 79 55.7
Carub.0005s2565 Capsella rubella HOM05D000689 ORTHO05D000015 1.6e-17 92.8 98 45.9
Carub.0005s2569 Capsella rubella HOM05D000689 ORTHO05D000015 1.6e-17 92.8 83 53.0
BraA06t26300Z Brassica rapa HOM05D000689 ORTHO05D000015 2.8e-17 92.0 85 51.8
AL5G40740 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.7e-17 91.7 95 47.4
BcaC01g02891 Brassica carinata HOM05D000689 ORTHO05D000015 3.7e-17 91.7 83 54.2
Carub.0005s2741 Capsella rubella HOM05D000689 ORTHO05D000015 3.7e-17 91.7 99 47.5
C03p58670 Brassica napus HOM05D000689 ORTHO05D000015 4.8e-17 91.3 85 52.9
A04p02320 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-16 90.1 97 46.4
C03p58690 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-16 90.1 83 54.2
BraA04t15962Z Brassica rapa HOM05D000689 ORTHO05D000015 1.1e-16 90.1 97 46.4
AT3G58860 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.4e-16 89.7 98 43.9
BraA05t19577Z Brassica rapa HOM05D000689 ORTHO05D000015 1.8e-16 89.4 107 53.3
CARHR214200 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.8e-16 89.4 92 50.0
BcaC02g10033 Brassica carinata HOM05D000689 ORTHO05D000015 2.4e-16 89.0 97 45.4
C04p33690 Brassica napus HOM05D000689 ORTHO05D000015 2.4e-16 89.0 97 45.4
BolC4t24938H Brassica oleracea HOM05D000689 ORTHO05D000015 2.4e-16 89.0 97 45.4
BcaB08g34586 Brassica carinata HOM05D000689 ORTHO05D000015 4.1e-16 88.2 84 52.4
BcaC07g40301 Brassica carinata HOM05D000689 ORTHO05D000015 9.0e-16 87.0 101 48.5
A09p51370 Brassica napus HOM05D000689 ORTHO05D000015 9.0e-16 87.0 99 46.5
C06p25820 Brassica napus HOM05D000689 ORTHO05D000015 9.0e-16 87.0 51 82.4
C08p34160 Brassica napus HOM05D000689 ORTHO05D000015 9.0e-16 87.0 101 48.5
BolC6t37742H Brassica oleracea HOM05D000689 ORTHO05D000015 9.0e-16 87.0 51 82.4
BolC8t51014H Brassica oleracea HOM05D000689 ORTHO05D000015 9.0e-16 87.0 101 48.5
BraA09t40578Z Brassica rapa HOM05D000689 ORTHO05D000015 9.0e-16 87.0 99 46.5
Thhalv10006456m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 9.0e-16 87.0 98 45.9
BcaC01g02892 Brassica carinata HOM05D000689 ORTHO05D000015 1.5e-15 86.3 82 53.7
BolC3t18127H Brassica oleracea HOM05D000689 ORTHO05D000015 1.5e-15 86.3 82 53.7
BcaB02g08234 Brassica carinata HOM05D000689 ORTHO05D000015 4.5e-15 84.7 97 43.3
CARHR186450 Cardamine hirsuta HOM05D000689 ORTHO05D000015 4.5e-15 84.7 92 47.8
BcaC07g40230 Brassica carinata HOM05D000689 ORTHO05D000015 5.9e-15 84.3 97 46.4
Carub.0005s2566 Capsella rubella HOM05D000689 ORTHO05D000015 2.9e-14 82.0 100 43.0
Carub.0007s3763 Capsella rubella HOM05D000689 ORTHO05D000015 5.0e-14 81.3 100 45.0
Thhalv10006457m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.1e-13 80.1 80 46.2
Sp3g28540 Schrenkiella parvula HOM05D000689 ORTHO05D000015 1.4e-13 79.7 68 52.9
CARHR180410 Cardamine hirsuta HOM05D000689 ORTHO05D000015 5.5e-13 77.8 68 54.4
CARHR051170 Cardamine hirsuta HOM05D000689 ORTHO05D000015 3.6e-12 75.1 57 59.6
AT3G58880 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.0e-11 73.6 68 52.9
BcaC01g03139 Brassica carinata HOM05D000689 ORTHO05D000015 8.8e-11 70.5 92 42.4
C03p55680 Brassica napus HOM05D000689 ORTHO05D000015 8.8e-11 70.5 92 42.4
Sp3g28560 Schrenkiella parvula HOM05D000689 ORTHO05D000015 1.1e-10 70.1 68 51.5
BolC3t17846H Brassica oleracea HOM05D000689 ORTHO05D000015 5.7e-10 67.8 92 40.2
Aa31LG10G13440 Aethionema arabicum HOM05D000689 ORTHO05D000015 4.8e-09 64.7 81 40.7
CARHR169290 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.4e-08 63.2 100 39.0
AT3G58890 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.4e-08 62.4 60 51.7
BcaC02g08067 Brassica carinata HOM05D000689 ORTHO05D000015 9.1e-08 60.5 103 33.0
C04p58810 Brassica napus HOM05D000689 ORTHO05D000015 9.1e-08 60.5 103 33.0
BcaB06g28328 Brassica carinata HOM05D000689 ORTHO05D000015 1.2e-07 60.1 107 33.6
A01p23570 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-07 59.7 73 37.0
BraA01t02263Z Brassica rapa HOM05D000689 ORTHO05D000015 1.5e-07 59.7 73 37.0
CARHR115210 Cardamine hirsuta HOM05D000689 ORTHO05D000015 3.4e-07 58.5 66 47.0
BcaC09g50088 Brassica carinata HOM05D000689 ORTHO05D000015 5.9e-07 57.8 73 35.6
A05p15520 Brassica napus HOM05D000689 ORTHO05D000015 5.9e-07 57.8 109 32.1
C01p29230 Brassica napus HOM05D000689 ORTHO05D000015 5.9e-07 57.8 73 35.6
BolC1t02852H Brassica oleracea HOM05D000689 ORTHO05D000015 5.9e-07 57.8 73 35.6
BraA05t20468Z Brassica rapa HOM05D000689 ORTHO05D000015 5.9e-07 57.8 109 32.1
BcaB06g28329 Brassica carinata HOM05D000689 ORTHO05D000015 7.7e-07 57.4 108 33.3
AL7G25770 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.2e-06 55.8 101 32.7
CARHR169380 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.2e-06 55.8 72 40.3
AL5G40840 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.9e-06 55.5 64 45.3
AT2G29930 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.8e-06 55.1 110 30.0
Thhalv10025182m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 3.8e-06 55.1 99 31.3
A04p22630 Brassica napus HOM05D000689 ORTHO05D000015 6.5e-06 54.3 106 33.0
BraA04t17808Z Brassica rapa HOM05D000689 ORTHO05D000015 6.5e-06 54.3 106 33.0
Carub.0005s2543 Capsella rubella HOM05D000689 ORTHO05D000015 6.5e-06 54.3 73 38.4
Carub.0007s2832 Capsella rubella HOM05D000689 ORTHO05D000015 6.5e-06 54.3 105 35.2
AL4G24650 Arabidopsis lyrata HOM05D000689 ORTHO05D019707 8.5e-06 53.9 114 32.5
AT4G27050 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 8.5e-06 53.9 101 32.7
Carub.0004s1101 Capsella rubella HOM05D000689 ORTHO05D000015 8.5e-06 53.9 104 31.7


User provided reference genes

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