Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p23750 Brassica napus HOM05D010123 ORTHO05D012290 1.6e-121 439.5 225 100.0
C06p24980 Brassica napus HOM05D010123 ORTHO05D012290 4.1e-90 335.1 213 82.2
BolC6t37650H Brassica oleracea HOM05D010123 ORTHO05D012290 4.1e-90 335.1 213 82.2
BcaB02g07564 Brassica carinata HOM05D010123 ORTHO05D012290 1.0e-80 303.9 202 76.2
BcaC08g44881 Brassica carinata HOM05D010123 ORTHO05D012290 3.1e-77 292.4 213 73.7
BcaC08g44882 Brassica carinata HOM05D010123 ORTHO05D012290 1.3e-75 287.0 213 73.2
BcaB02g08286 Brassica carinata HOM05D010123 ORTHO05D012290 1.1e-55 220.7 216 57.9
BcaC02g09975 Brassica carinata HOM05D010123 ORTHO05D012290 8.1e-54 214.5 218 54.1
BcaC02g09978 Brassica carinata HOM05D010123 ORTHO05D012290 8.1e-54 214.5 218 54.1
C04p34410 Brassica napus HOM05D010123 ORTHO05D012290 8.1e-54 214.5 218 54.1
BolC4t25003H Brassica oleracea HOM05D010123 ORTHO05D012290 8.1e-54 214.5 218 54.1
BraA04t16006Z Brassica rapa HOM05D010123 ORTHO05D012290 4.9e-51 205.3 214 53.7
A04p02820 Brassica napus HOM05D010123 ORTHO05D012290 6.2e-46 188.3 211 51.2
BraA07t30028Z Brassica rapa HOM05D010123 ORTHO05D012290 4.3e-39 165.6 103 89.3
AL5G39610 Arabidopsis lyrata HOM05D010123 ORTHO05D012290 9.0e-37 157.9 225 40.9
Sp5g04760 Schrenkiella parvula HOM05D010123 ORTHO05D012290 4.5e-36 155.6 135 64.4
Carub.0005s2480 Capsella rubella HOM05D010123 ORTHO05D012290 2.5e-34 149.8 195 44.6
AT3G57960 Arabidopsis thaliana HOM05D010123 ORTHO05D012290 4.8e-30 135.6 225 37.3
Thhalv10006494m.g Eutrema salsugineum HOM05D010123 ORTHO05D012290 1.1e-26 124.4 144 45.1
Aa31LG10G12660 Aethionema arabicum HOM05D010123 ORTHO05D012290 7.4e-23 111.7 196 36.2
Aa31LG10G12670 Aethionema arabicum HOM05D010123 ORTHO05D012290 3.8e-19 99.4 193 34.7
THA.LOC104824469 Tarenaya hassleriana HOM05D011318 ORTHO05D013413 1.8e-16 90.5 195 28.7
Carub.0005s2481 Capsella rubella HOM05D011318 ORTHO05D013413 3.3e-15 86.3 233 28.3
AT3G57970 Arabidopsis thaliana HOM05D011318 ORTHO05D013413 1.3e-14 84.3 250 27.6
AL5G39620 Arabidopsis lyrata HOM05D011318 ORTHO05D013413 2.8e-14 83.2 259 27.0
Thhalv10006402m.g Eutrema salsugineum HOM05D011318 ORTHO05D013413 6.3e-14 82.0 239 31.0
BcaC07g40170 Brassica carinata HOM05D011318 ORTHO05D013413 1.4e-13 80.9 211 30.3
Sp5g04750 Schrenkiella parvula HOM05D011318 ORTHO05D013413 4.1e-13 79.3 211 28.4
C08p33540 Brassica napus HOM05D011318 ORTHO05D013413 7.0e-13 78.6 239 28.5
BcaC02g09977 Brassica carinata HOM05D010123 ORTHO05D012290 2.2e-11 73.6 61 54.1
BolC8t50949H Brassica oleracea HOM05D011318 ORTHO05D013413 1.5e-10 70.9 245 27.8
Aa31LG10G12680 Aethionema arabicum HOM05D011318 ORTHO05D013413 3.2e-10 69.7 221 25.8
Sp3g10370 Schrenkiella parvula HOM05D001227 ORTHO05D001082 1.2e-09 67.8 199 26.6
BraA09t40526Z Brassica rapa HOM05D011318 ORTHO05D013413 1.6e-09 67.4 236 28.8
A09p50790 Brassica napus HOM05D011318 ORTHO05D013413 4.7e-09 65.9 248 28.6
AT3G12140 Arabidopsis thaliana HOM05D001227 ORTHO05D001082 6.1e-09 65.5 198 26.3
Thhalv10020983m.g Eutrema salsugineum HOM05D001227 ORTHO05D001082 3.0e-08 63.2 198 26.8
THA.LOC104804890 Tarenaya hassleriana HOM05D011318 ORTHO05D013413 3.0e-08 63.2 262 24.4
BcaNung05747 Brassica carinata HOM05D011318 ORTHO05D013413 4.0e-08 62.8 73 42.5
BcaNung05749 Brassica carinata HOM05D011318 ORTHO05D013413 4.0e-08 62.8 73 42.5
BcaC09g48216 Brassica carinata HOM05D001227 ORTHO05D001082 5.7e-07 58.9 208 25.0
BolC1t05262H Brassica oleracea HOM05D001227 ORTHO05D001082 5.7e-07 58.9 208 25.0
BcaC07g40139 Brassica carinata HOM05D008477 ORTHO05D012146 1.7e-06 57.4 79 44.3
C08p31850 Brassica napus HOM05D008477 ORTHO05D024345 1.7e-06 57.4 61 50.8
AL6G16890 Arabidopsis lyrata HOM05D001227 ORTHO05D001082 2.8e-06 56.6 187 27.8
BraA07t29962Z Brassica rapa HOM05D008477 ORTHO05D021917 3.7e-06 56.2 61 44.3
C06p23620 Brassica napus HOM05D008477 ORTHO05D021917 4.8e-06 55.8 61 45.9
BcaC08g44792 Brassica carinata HOM05D008477 ORTHO05D021917 8.2e-06 55.1 62 43.5


User provided reference genes

Program Settings