Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p22190 Brassica napus HOM05D001346 ORTHO05D001205 1.5e-50 202.6 107 100.0
Sp5g07830 Schrenkiella parvula HOM05D001346 ORTHO05D001205 1.2e-26 123.2 145 55.9
Thhalv10010426m.g Eutrema salsugineum HOM05D001346 ORTHO05D001205 4.5e-26 121.3 145 55.9
AL5G35700 Arabidopsis lyrata HOM05D001346 ORTHO05D001205 7.6e-26 120.6 146 55.5
BcaB01g00174 Brassica carinata HOM05D001346 ORTHO05D001205 1.1e-24 116.7 146 54.8
BcaC07g39805 Brassica carinata HOM05D001346 ORTHO05D001205 1.4e-24 116.3 146 54.8
C08p29760 Brassica napus HOM05D001346 ORTHO05D001205 1.4e-24 116.3 146 54.8
BolC8t50587H Brassica oleracea HOM05D001346 ORTHO05D001205 1.4e-24 116.3 146 54.8
AT3G54620 Arabidopsis thaliana HOM05D001346 ORTHO05D001205 1.9e-24 115.9 146 55.5
A09p47570 Brassica napus HOM05D001346 ORTHO05D001205 3.2e-24 115.2 146 54.1
C04p37930 Brassica napus HOM05D004045 ORTHO05D004923 3.2e-24 115.2 145 55.9
BolC4t25369H Brassica oleracea HOM05D001346 ORTHO05D001205 3.2e-24 115.2 145 55.9
BraA09t40213Z Brassica rapa HOM05D001346 ORTHO05D001205 3.2e-24 115.2 146 54.1
BcaB02g08449 Brassica carinata HOM05D001346 ORTHO05D001205 2.1e-23 112.5 144 54.9
CARHR164520 Cardamine hirsuta HOM05D001346 ORTHO05D001205 2.7e-23 112.1 145 52.4
BcaC02g09056 Brassica carinata HOM05D001346 ORTHO05D001205 4.6e-23 111.3 145 54.5
Carub.0005s2122 Capsella rubella HOM05D001346 ORTHO05D001205 2.3e-22 109.0 145 53.1
BraA04t16229Z Brassica rapa HOM05D004045 ORTHO05D004923 1.1e-19 100.1 157 49.0
Duzib138G1464 Durio zibethinus HOM05D001346 ORTHO05D001205 2.6e-18 95.5 99 58.6
A09p36280 Brassica napus HOM05D010193 ORTHO05D012632 6.0e-15 84.3 66 74.2
Aa31LG5G20790 Aethionema arabicum HOM05D001346 ORTHO05D001205 2.3e-14 82.4 111 53.2
Sp4g21260 Schrenkiella parvula HOM05D001346 ORTHO05D001205 4.3e-13 78.2 150 43.3
C06p22260 Brassica napus HOM05D001346 ORTHO05D027198 5.6e-13 77.8 61 75.4
BcaB02g07729 Brassica carinata HOM05D001346 ORTHO05D001205 3.7e-12 75.1 109 48.6
BolC6t37411H Brassica oleracea HOM05D001346 ORTHO05D027198 6.2e-12 74.3 63 73.0
THA.LOC104799951 Tarenaya hassleriana HOM05D001346 ORTHO05D001205 6.2e-12 74.3 143 41.3
Manes.05G083900 Manihot esculenta HOM05D001346 ORTHO05D001205 1.8e-11 72.8 137 41.6
ECA232G3692 Erigeron canadensis HOM05D001346 ORTHO05D000001 6.9e-11 70.9 129 41.9
C03p25700 Brassica napus HOM05D001346 ORTHO05D001205 2.0e-10 69.3 141 42.6
A03p60940 Brassica napus HOM05D001346 ORTHO05D014100 3.4e-10 68.6 100 45.0
C02p31280 Brassica napus HOM05D001346 ORTHO05D014100 3.4e-10 68.6 98 48.0
MD10G1193400 Malus domestica HOM05D001346 ORTHO05D001205 7.6e-10 67.4 141 39.0
BcaB01g03623 Brassica carinata HOM05D001346 ORTHO05D001205 1.0e-09 67.0 149 38.9
BcaC01g05510 Brassica carinata HOM05D001346 ORTHO05D001205 1.0e-09 67.0 149 38.9
Cpa.g.sc52.101 Carica papaya HOM05D001346 ORTHO05D001205 1.0e-09 67.0 134 40.3
Prupe.8G232800 Prunus persica HOM05D001346 ORTHO05D001205 3.8e-09 65.1 91 50.5
MD05G1206400 Malus domestica HOM05D001346 ORTHO05D001205 4.9e-09 64.7 129 40.3
Manes.01G202200 Manihot esculenta HOM05D001346 ORTHO05D001205 4.9e-09 64.7 137 39.4
Cfa002319 Carpinus fangiana HOM05D001346 ORTHO05D001205 8.4e-09 63.9 128 40.6
Ciclev10020133m.g Citrus clementina HOM05D001346 ORTHO05D001205 8.4e-09 63.9 131 39.7
Haze_24524 Corylus avellana HOM05D001346 ORTHO05D001205 8.4e-09 63.9 91 50.5
Glyma.20G224500 Glycine max HOM05D001346 ORTHO05D001205 1.1e-08 63.5 133 38.3
CiPaw.07G067200 Carya illinoinensis HOM05D001346 ORTHO05D001205 1.4e-08 63.2 134 36.6
PSO210G6449 Papaver somniferum HOM05D001346 ORTHO05D001205 1.4e-08 63.2 91 47.3
Ciclev10001051m.g Citrus clementina HOM05D001346 ORTHO05D001205 1.9e-08 62.8 128 39.8
Glyma.10G162100 Glycine max HOM05D001346 ORTHO05D001205 1.9e-08 62.8 129 38.0
PSO210G0790 Papaver somniferum HOM05D001346 ORTHO05D001205 1.9e-08 62.8 128 39.1
PSO832G4214 Papaver somniferum HOM05D001346 ORTHO05D001205 1.9e-08 62.8 128 39.1
GSVIVG01021790001 Vitis vinifera HOM05D001346 ORTHO05D001205 1.9e-08 62.8 134 38.1
Peaxi162Scf00071g00088 Petunia axillaris HOM05D001346 ORTHO05D001205 2.5e-08 62.4 141 36.9
Prupe.6G343100 Prunus persica HOM05D001346 ORTHO05D001205 2.5e-08 62.4 130 37.7
Sabra02G0036700 Salix brachista HOM05D001346 ORTHO05D001205 2.5e-08 62.4 64 62.5
arahy.Tifrunner.gnm1.ann1.4SA7RY Arachis hypogaea HOM05D001346 ORTHO05D001205 3.2e-08 62.0 128 39.1
arahy.Tifrunner.gnm1.ann1.EQL16Q Arachis hypogaea HOM05D001346 ORTHO05D001205 3.2e-08 62.0 128 39.1
Migut.N01912 Erythranthe guttata HOM05D001346 ORTHO05D001205 3.2e-08 62.0 137 38.0
Lsat_1_v5_gn_8_115900 Lactuca sativa HOM05D001346 ORTHO05D001205 3.2e-08 62.0 129 41.1
Lalb_Chr02g0148821 Lupinus albus HOM05D001346 ORTHO05D001205 3.2e-08 62.0 129 38.8
Atru.chr5.1555 Acer truncatum HOM05D001346 ORTHO05D001205 4.2e-08 61.6 129 39.5
DCAR_006652 Daucus carota HOM05D001346 ORTHO05D001205 4.2e-08 61.6 130 40.0
PSO461G0023 Papaver somniferum HOM05D001346 ORTHO05D001205 4.2e-08 61.6 92 46.7
Hund06969 Selenicereus undatus HOM05D001346 ORTHO05D001205 4.2e-08 61.6 131 38.2
Lj9A662G26 Lonicera japonica HOM05D001346 ORTHO05D001205 5.5e-08 61.2 85 50.6
Hund22114 Selenicereus undatus HOM05D001346 ORTHO05D001205 5.5e-08 61.2 132 37.9
ClCG02G016610 Citrullus lanatus HOM05D001346 ORTHO05D001205 7.1e-08 60.8 134 38.1
PGR004G2685 Punica granatum HOM05D001346 ORTHO05D001205 7.1e-08 60.8 127 38.6
HPP92_026289 Vanilla planifolia HOM05D001346 ORTHO05D001205 7.1e-08 60.8 84 50.0
Actinidia18362 Actinidia chinensis HOM05D001346 ORTHO05D001205 9.3e-08 60.5 131 38.2
A10p05810 Brassica napus HOM05D001346 ORTHO05D014100 9.3e-08 60.5 39 82.1
Duzib128G1751 Durio zibethinus HOM05D001346 ORTHO05D001205 9.3e-08 60.5 127 37.8
Aqoxy5G00366 Aquilegia oxysepala HOM05D001346 ORTHO05D001205 1.2e-07 60.1 92 44.6
Dinv04732 Davidia involucrata HOM05D001346 ORTHO05D001205 1.2e-07 60.1 129 37.2
FAN14G2404 Fragaria x ananassa HOM05D001346 ORTHO05D001205 1.2e-07 60.1 136 37.5
Hma1.2p1_0817F.1_g223100 Hydrangea macrophylla HOM05D001346 ORTHO05D001205 1.6e-07 59.7 130 37.7
Nn3g19494 Nelumbo nucifera HOM05D001346 ORTHO05D001205 1.6e-07 59.7 131 37.4
Aa31LG5G2270 Aethionema arabicum HOM05D001346 ORTHO05D001205 2.1e-07 59.3 128 39.8
FvH4_6g02940 Fragaria vesca HOM05D001346 ORTHO05D001205 2.1e-07 59.3 134 37.3
Medtr1g080920 Medicago truncatula HOM05D001346 ORTHO05D001205 2.1e-07 59.3 130 38.5
BcaC01g05508 Brassica carinata HOM05D001346 ORTHO05D001205 2.7e-07 58.9 120 41.7
HanXRQChr15g0486601 Helianthus annuus HOM05D001346 ORTHO05D001205 2.7e-07 58.9 128 41.4
MBI04_g08414_MAGBIO Magnolia biondii HOM05D001346 ORTHO05D001205 3.5e-07 58.5 124 40.3
QL12p042624 Quercus lobata HOM05D001346 ORTHO05D001205 3.5e-07 58.5 146 34.9
TPR.G12949 Trifolium pratense HOM05D001346 ORTHO05D001205 3.5e-07 58.5 128 38.3
BcaC08g44690 Brassica carinata HOM05D001346 ORTHO05D027198 4.6e-07 58.2 101 45.5
CiPaw.08G123700 Carya illinoinensis HOM05D001346 ORTHO05D001205 4.6e-07 58.2 129 34.9
Nitab4.5_0001592g0050 Nicotiana tabacum HOM05D001346 ORTHO05D001205 4.6e-07 58.2 130 36.9
Nitab4.5_0014012g0010 Nicotiana tabacum HOM05D001346 ORTHO05D001205 4.6e-07 58.2 130 36.9
QL03p026231 Quercus lobata HOM05D001346 ORTHO05D001205 4.6e-07 58.2 129 35.7
THA.LOC104815936 Tarenaya hassleriana HOM05D001346 ORTHO05D001205 4.6e-07 58.2 122 43.4
FAN05G3321 Fragaria x ananassa HOM05D001346 ORTHO05D001205 6.0e-07 57.8 134 36.6
FAN09G4362 Fragaria x ananassa HOM05D001346 ORTHO05D001205 6.0e-07 57.8 134 36.6
QL03p025824 Quercus lobata HOM05D001346 ORTHO05D001205 6.0e-07 57.8 129 34.9
GSVIVG01000714001 Vitis vinifera HOM05D001346 ORTHO05D001205 6.0e-07 57.8 99 44.4
BolC3t14957H Brassica oleracea HOM05D001346 ORTHO05D001205 7.9e-07 57.4 141 39.0
CAN.G134.98 Capsicum annuum HOM05D001346 ORTHO05D001205 7.9e-07 57.4 90 42.2
MBI11_g15910_MAGBIO Magnolia biondii HOM05D001346 ORTHO05D001205 7.9e-07 57.4 131 37.4
Atru.chr2.814 Acer truncatum HOM05D001346 ORTHO05D001205 1.0e-06 57.0 130 36.2
BolC4t23241H Brassica oleracea HOM05D021299 ORTHO05D014100 1.0e-06 57.0 39 79.5
Sed0027418 Sechium edule HOM05D001346 ORTHO05D001205 1.0e-06 57.0 134 35.8
Solyc01g097330.3 Solanum lycopersicum HOM05D001346 ORTHO05D001205 1.0e-06 57.0 131 35.9
Sopen01g041000 Solanum pennellii HOM05D001346 ORTHO05D001205 1.0e-06 57.0 131 35.9
PGSC0003DMG400019455 Solanum tuberosum HOM05D001346 ORTHO05D001205 1.0e-06 57.0 131 36.6
TWI18G0258 Tripterygium wilfordii HOM05D001346 ORTHO05D001205 1.0e-06 57.0 129 37.2
TAR633G1863 Trochodendron aralioides HOM05D001346 ORTHO05D001205 1.0e-06 57.0 109 38.5
BcaC01g05514 Brassica carinata HOM05D001346 ORTHO05D001205 1.3e-06 56.6 141 39.0
Ca_10046_v3 Cicer arietinum L. HOM05D001346 ORTHO05D001205 1.3e-06 56.6 90 46.7
Dinv10013 Davidia involucrata HOM05D001346 ORTHO05D001205 1.3e-06 56.6 105 41.0
Peaxi162Scf00282g00338 Petunia axillaris HOM05D001346 ORTHO05D001205 1.3e-06 56.6 131 36.6
Psat6g144640 Pisum sativum HOM05D001346 ORTHO05D001205 1.3e-06 56.6 128 37.5
FAN27G3194 Fragaria x ananassa HOM05D001346 ORTHO05D001205 1.8e-06 56.2 131 38.9
TAR362G0578 Trochodendron aralioides HOM05D001346 ORTHO05D001205 1.8e-06 56.2 131 36.6
Actinidia32804 Actinidia chinensis HOM05D001346 ORTHO05D001205 2.3e-06 55.8 129 36.4
Lj5g0014207 Lotus japonicus HOM05D001346 ORTHO05D001205 2.3e-06 55.8 130 36.9
AUR62001010 Chenopodium quinoa HOM05D001346 ORTHO05D001205 3.0e-06 55.5 131 39.7
AUR62004948 Chenopodium quinoa HOM05D001346 ORTHO05D001205 3.0e-06 55.5 131 39.7
RcHm_v2.0_Chr3g0451141 Rosa chinensis HOM05D001346 ORTHO05D001205 3.0e-06 55.5 134 35.8
Haze_04362 Corylus avellana HOM05D001346 ORTHO05D001205 3.9e-06 55.1 129 34.9
Sp6g02550 Schrenkiella parvula HOM05D001346 ORTHO05D001205 3.9e-06 55.1 126 38.1
Cfa006423 Carpinus fangiana HOM05D001346 ORTHO05D001205 5.1e-06 54.7 129 34.9
CSS0049111 Camellia sinensis var. sinensis HOM05D001346 ORTHO05D001205 6.7e-06 54.3 131 36.6
CiPaw.04G181300 Carya illinoinensis HOM05D001346 ORTHO05D001205 6.7e-06 54.3 76 50.0
Eucgr.H04338 Eucalyptus grandis HOM05D001346 ORTHO05D001205 6.7e-06 54.3 133 38.3
FvH4_2g22580 Fragaria vesca HOM05D001346 ORTHO05D001205 6.7e-06 54.3 131 38.2
FAN15G3714 Fragaria x ananassa HOM05D001346 ORTHO05D001205 6.7e-06 54.3 131 38.2
FAN24G3107 Fragaria x ananassa HOM05D001346 ORTHO05D001205 6.7e-06 54.3 131 38.2
Manes.08G134500 Manihot esculenta HOM05D001346 ORTHO05D001205 6.7e-06 54.3 133 36.1
RcHm_v2.0_Chr6g0289641 Rosa chinensis HOM05D001346 ORTHO05D001205 6.7e-06 54.3 131 38.2
THA.LOC104804691 Tarenaya hassleriana HOM05D001346 ORTHO05D001205 6.7e-06 54.3 180 31.1
Nn1g02540 Nelumbo nucifera HOM05D001346 ORTHO05D001205 8.7e-06 53.9 73 47.9


User provided reference genes

Program Settings