Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p21870 Brassica napus HOM05D003274 ORTHO05D003714 3.3e-34 147.9 79 100.0
A05p38550 Brassica napus HOM05D003274 ORTHO05D003714 1.7e-27 125.6 68 100.0
A09p62530 Brassica napus HOM05D003274 ORTHO05D003714 1.7e-27 125.6 68 100.0
BraA01t03768Z Brassica rapa HOM05D003274 ORTHO05D003714 1.7e-27 125.6 68 100.0
BraA05t22646Z Brassica rapa HOM05D003274 ORTHO05D003714 2.7e-20 101.7 56 100.0
Aqoxy2G01722 Aquilegia oxysepala HOM05D003274 ORTHO05D003714 5.3e-16 87.4 56 78.6
SalBow4G3301 Salvia bowleyana HOM05D003274 ORTHO05D003714 9.0e-16 86.7 56 78.6
Glyma.04G151500 Glycine max HOM05D003274 ORTHO05D003714 1.2e-15 86.3 56 76.8
Glyma.06G211400 Glycine max HOM05D003274 ORTHO05D003714 1.2e-15 86.3 56 76.8
Gohir.D04G005200 Gossypium hirsutum HOM05D003274 ORTHO05D003714 1.2e-15 86.3 56 76.8
Gorai.012G006500 Gossypium raimondii HOM05D003274 ORTHO05D003714 1.2e-15 86.3 56 76.8
Lalb_Chr01g0004551 Lupinus albus HOM05D003274 ORTHO05D003714 1.2e-15 86.3 56 76.8
Phvul.011G085100 Phaseolus vulgaris HOM05D003274 ORTHO05D003714 1.2e-15 86.3 56 76.8
VMungo1127G1114 Vigna mungo HOM05D003274 ORTHO05D003714 1.2e-15 86.3 56 76.8
Gohir.A10G202200 Gossypium hirsutum HOM05D003274 ORTHO05D003714 2.0e-15 85.5 56 76.8
Gohir.D10G210400 Gossypium hirsutum HOM05D003274 ORTHO05D003714 2.0e-15 85.5 56 76.8
Gorai.011G235800 Gossypium raimondii HOM05D003274 ORTHO05D003714 2.0e-15 85.5 56 76.8
Nn2g13817 Nelumbo nucifera HOM05D003274 ORTHO05D003714 2.0e-15 85.5 56 75.0
arahy.Tifrunner.gnm1.ann1.2XGG6Y Arachis hypogaea HOM05D003274 ORTHO05D003714 2.6e-15 85.1 56 75.0
arahy.Tifrunner.gnm1.ann1.A7H879 Arachis hypogaea HOM05D003274 ORTHO05D003714 2.6e-15 85.1 56 75.0
arahy.Tifrunner.gnm1.ann1.R6Y7HN Arachis hypogaea HOM05D003274 ORTHO05D003714 2.6e-15 85.1 56 75.0
arahy.Tifrunner.gnm1.ann1.RYV3A9 Arachis hypogaea HOM05D003274 ORTHO05D003714 2.6e-15 85.1 56 75.0
Glyma.12G080000 Glycine max HOM05D003274 ORTHO05D003714 3.4e-15 84.7 56 75.0
HanXRQChr04g0103601 Helianthus annuus HOM05D003274 ORTHO05D003714 3.4e-15 84.7 56 75.0
Sed0002530 Sechium edule HOM05D003274 ORTHO05D003714 3.4e-15 84.7 56 75.0
Lj3g0011566 Lotus japonicus HOM05D003274 ORTHO05D003714 4.5e-15 84.3 56 75.0
Nitab4.5_0001163g0120 Nicotiana tabacum HOM05D003274 ORTHO05D003714 4.5e-15 84.3 56 75.0
TWI63G1596 Tripterygium wilfordii HOM05D003274 ORTHO05D003714 4.5e-15 84.3 56 75.0
Dinv34732 Davidia involucrata HOM05D003274 ORTHO05D003714 5.8e-15 84.0 56 73.2
Lalb_Chr03g0027661 Lupinus albus HOM05D003274 ORTHO05D003714 5.8e-15 84.0 56 73.2
Nitab4.5_0002001g0020 Nicotiana tabacum HOM05D003274 ORTHO05D003714 5.8e-15 84.0 56 75.0
QL01p015396 Quercus lobata HOM05D003274 ORTHO05D003714 5.8e-15 84.0 56 75.0
Lsat_1_v5_gn_6_44161 Lactuca sativa HOM05D003274 ORTHO05D003714 7.6e-15 83.6 56 73.2
Peaxi162Scf00892g00008 Petunia axillaris HOM05D003274 ORTHO05D003714 7.6e-15 83.6 56 73.2
Thecc.09G349700 Theobroma cacao HOM05D003274 ORTHO05D003714 7.6e-15 83.6 56 75.0
BraA02t05701Z Brassica rapa HOM05D003274 ORTHO05D003714 9.9e-15 83.2 56 78.6
Ca_19311_v3 Cicer arietinum L. HOM05D003274 ORTHO05D003714 9.9e-15 83.2 56 73.2
Medtr4g057565 Medicago truncatula HOM05D003274 ORTHO05D003714 9.9e-15 83.2 56 73.2
Psat7g149280 Pisum sativum HOM05D003274 ORTHO05D003714 9.9e-15 83.2 56 73.2
BcaB05g22673 Brassica carinata HOM05D003274 ORTHO05D003714 1.7e-14 82.4 51 82.4
DCAR_018775 Daucus carota HOM05D003274 ORTHO05D003714 1.7e-14 82.4 52 76.9
SGA_v2.0_scaffold277G46690 Striga asiatica HOM05D003274 ORTHO05D003714 1.7e-14 82.4 56 71.4
BcaB08g36387 Brassica carinata HOM05D003274 ORTHO05D003714 2.2e-14 82.0 56 75.0
MBI18_g42726_MAGBIO Magnolia biondii HOM05D003274 ORTHO05D003714 2.9e-14 81.6 56 73.2
Phvul.L001682 Phaseolus vulgaris HOM05D003274 ORTHO05D003714 2.9e-14 81.6 56 73.2
SEGI_32844 Sequoiadendron giganteum HOM05D003274 ORTHO05D003714 2.9e-14 81.6 56 73.2
Solyc06g074840.3 Solanum lycopersicum HOM05D003274 ORTHO05D003714 2.9e-14 81.6 56 71.4
Sopen06g031270 Solanum pennellii HOM05D003274 ORTHO05D003714 2.9e-14 81.6 56 71.4
PGSC0003DMG400007136 Solanum tuberosum HOM05D003274 ORTHO05D003714 2.9e-14 81.6 56 71.4
TWI79G0911 Tripterygium wilfordii HOM05D003274 ORTHO05D003714 2.9e-14 81.6 56 73.2
Haze_16745 Corylus avellana HOM05D003274 ORTHO05D003714 3.8e-14 81.3 56 69.6
Aqoxy1G01133 Aquilegia oxysepala HOM05D003274 ORTHO05D003714 4.9e-14 80.9 56 71.4
Lsat_1_v5_gn_1_62640 Lactuca sativa HOM05D003274 ORTHO05D003714 4.9e-14 80.9 56 71.4
MD01G1102500 Malus domestica HOM05D003274 ORTHO05D003714 4.9e-14 80.9 56 71.4
CSS0017437 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 8.4e-14 80.1 56 69.6
CSS0044730 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 8.4e-14 80.1 56 69.6
Os03g0108400 Oryza sativa ssp. japonica HOM05D003274 ORTHO05D003714 8.4e-14 80.1 56 71.4
HPP92_008502 Vanilla planifolia HOM05D003274 ORTHO05D003714 3.2e-13 78.2 56 67.9
Zm00001eb321340 Zea mays HOM05D003274 ORTHO05D003714 4.2e-13 77.8 56 66.1
FvH4_7g18680 Fragaria vesca HOM05D003274 ORTHO05D003714 5.4e-13 77.4 56 67.9
FAN06G1450 Fragaria x ananassa HOM05D003274 ORTHO05D003714 5.4e-13 77.4 56 67.9
ATR0723G021 Amborella trichopoda HOM05D003274 ORTHO05D003714 7.1e-13 77.0 56 67.9
AL5G23460 Arabidopsis lyrata HOM05D003274 ORTHO05D003714 7.1e-13 77.0 56 71.4
Duzib106G1403 Durio zibethinus HOM05D003274 ORTHO05D003714 2.7e-12 75.1 56 67.9
C09p53640 Brassica napus HOM05D003274 ORTHO05D003714 4.6e-12 74.3 46 84.8
BolC9t58239H Brassica oleracea HOM05D003274 ORTHO05D003714 4.6e-12 74.3 46 84.8
COL.COLO4_36536 Corchorus olitorius HOM05D003274 ORTHO05D003714 6.0e-12 73.9 81 54.3
Pp3c15_15320 Physcomitrium patens HOM05D003274 ORTHO05D003714 6.0e-12 73.9 56 66.1
TAR636G2234 Trochodendron aralioides HOM05D003274 ORTHO05D003714 6.0e-12 73.9 56 66.1
Ah.08g216240 Amaranthus hybridus HOM05D003274 ORTHO05D003714 3.0e-11 71.6 75 54.7
Carub.0005s1078 Capsella rubella HOM05D003274 ORTHO05D003714 5.1e-11 70.9 56 64.3
AT3G45000 Arabidopsis thaliana HOM05D003274 ORTHO05D003714 8.7e-11 70.1 51 68.6
Actinidia07179 Actinidia chinensis HOM05D003274 ORTHO05D003714 1.9e-10 68.9 51 62.7
Mapoly0195s0002 Marchantia polymorpha HOM05D003274 ORTHO05D003714 1.9e-10 68.9 53 64.2
A07p27720 Brassica napus HOM05D003274 ORTHO05D040491 5.6e-10 67.4 36 94.4
BraA02t07847Z Brassica rapa HOM05D003274 ORTHO05D040491 5.6e-10 67.4 36 94.4
BcaC04g19614 Brassica carinata HOM05D003274 ORTHO05D003714 7.4e-10 67.0 41 82.9
ClCG03G002800 Citrullus lanatus HOM05D003274 ORTHO05D003714 7.4e-10 67.0 44 75.0
Pp3c15_14920 Physcomitrium patens HOM05D003274 ORTHO05D003714 7.4e-10 67.0 51 66.7
Thecc.10G085700 Theobroma cacao HOM05D003274 ORTHO05D003714 1.3e-09 66.2 56 60.7
Actinidia24139 Actinidia chinensis HOM05D003274 ORTHO05D003714 1.6e-09 65.9 56 58.9
AagrBONN_evm.TU.Sc2ySwM_368.224 Anthoceros agrestis HOM05D003274 ORTHO05D003714 2.1e-09 65.5 56 57.1
Lj4g0007028 Lotus japonicus HOM05D003274 ORTHO05D003714 2.8e-09 65.1 59 57.6
MD11G1146600 Malus domestica HOM05D003274 ORTHO05D003714 4.8e-09 64.3 56 57.1
CSS0031341 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 1.1e-08 63.2 56 55.4
PSO063G0736 Papaver somniferum HOM05D003274 ORTHO05D003714 3.1e-08 61.6 56 57.1
COL.COLO4_24632 Corchorus olitorius HOM05D002898 ORTHO05D003714 4.0e-08 61.2 43 72.1
EL10Ac7g16339 Beta vulgaris HOM05D003274 ORTHO05D003714 5.3e-08 60.8 56 55.4
FAN06G4988 Fragaria x ananassa HOM05D003274 ORTHO05D003714 9.0e-08 60.1 44 65.9
ECA233G5403 Erigeron canadensis HOM05D003274 ORTHO05D003714 7.6e-07 57.0 56 53.6
Potri.008G034700 Populus trichocarpa HOM05D003274 ORTHO05D003714 7.6e-07 57.0 56 51.8
MD00G1032300 Malus domestica HOM05D003274 ORTHO05D003714 1.7e-06 55.8 56 50.0
BNapus_Darmor_BZH_scaffold_38p00230 Brassica napus HOM05D003274 ORTHO05D003714 2.2e-06 55.5 35 80.0
C02p11410 Brassica napus HOM05D003274 ORTHO05D003714 2.2e-06 55.5 35 80.0
CBR_g1004 Chara braunii HOM05D003274 ORTHO05D003714 2.2e-06 55.5 46 58.7
PSO339G3703 Papaver somniferum HOM05D003274 ORTHO05D003714 2.2e-06 55.5 57 50.9
A03p10970 Brassica napus HOM05D003274 ORTHO05D003714 2.9e-06 55.1 56 53.6
BraA03t10407Z Brassica rapa HOM05D003274 ORTHO05D003714 2.9e-06 55.1 56 53.6
COL.COLO4_33787 Corchorus olitorius HOM05D002898 ORTHO05D003424 6.4e-06 53.9 41 70.7
Sabra08G0023100 Salix brachista HOM05D003274 ORTHO05D003714 6.4e-06 53.9 56 50.0


User provided reference genes

Program Settings