Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p20590 Brassica napus HOM05D015678 ORTHO05D013939 1.1e-36 156.0 72 100.0
A07p20600 Brassica napus HOM05D015678 ORTHO05D013939 1.1e-36 156.0 72 100.0
BraA07t29749Z Brassica rapa HOM05D015678 ORTHO05D013939 1.1e-36 156.0 72 100.0
C06p19490 Brassica napus HOM05D015678 ORTHO05D013939 1.5e-33 145.6 72 91.7
BolC6t37143H Brassica oleracea HOM05D015678 ORTHO05D013939 9.6e-33 142.9 72 91.7
TAR622G0447 Trochodendron aralioides HOM05D000568 ORTHO05D003200 6.1e-11 70.5 50 56.0
arahy.Tifrunner.gnm1.ann1.Z8L4ZJ Arachis hypogaea HOM05D015678 ORTHO05D013939 1.5e-09 65.9 70 45.7
arahy.Tifrunner.gnm1.ann1.75ENLE Arachis hypogaea HOM05D000568 ORTHO05D013939 3.7e-08 61.2 67 41.8
RcHm_v2.0_Chr7g0191531 Rosa chinensis HOM05D015678 ORTHO05D013939 8.2e-08 60.1 41 58.5
HPP92_025324 Vanilla planifolia HOM05D015678 ORTHO05D013939 1.1e-07 59.7 47 53.2
Nn7g38088 Nelumbo nucifera HOM05D004211 ORTHO05D013939 9.1e-07 56.6 50 48.0
Medtr2g019740 Medicago truncatula HOM05D000568 ORTHO05D000628 2.6e-06 55.1 40 52.5
unitig_899.g14754 Utricularia gibba HOM05D000568 ORTHO05D005559 2.6e-06 55.1 35 57.1
Actinidia00046 Actinidia chinensis HOM05D000568 ORTHO05D000628 3.4e-06 54.7 63 42.9
CAN.G1090.20 Capsicum annuum HOM05D000002 ORTHO05D000001 5.9e-06 53.9 54 42.6


User provided reference genes

Program Settings