Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 4.1e-92 341.3 159 100.0
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 8.5e-74 280.4 159 84.9
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 1.2e-72 276.6 164 81.7
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 4.5e-67 258.1 159 79.2
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 5.9e-67 257.7 159 79.2
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 2.4e-60 235.7 154 74.0
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 1.4e-52 209.9 154 68.2
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 2.0e-51 206.1 164 66.5
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 3.1e-47 192.2 163 63.8
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 1.7e-45 186.4 164 62.2
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 2.9e-45 185.7 163 62.0
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 1.9e-44 183.0 163 62.0
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 1.7e-42 176.4 156 58.3
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 1.5e-38 163.3 118 66.1
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 7.5e-38 161.0 118 64.4
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 9.8e-38 160.6 118 63.6
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 1.7e-37 159.8 118 63.6
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 2.2e-37 159.5 135 60.0
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 2.2e-37 159.5 136 57.4
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 2.9e-37 159.1 140 55.7
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 3.7e-37 158.7 154 53.9
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 8.3e-37 157.5 132 60.6
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 8.3e-37 157.5 123 61.8
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 8.3e-37 157.5 156 53.8
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 1.1e-36 157.1 132 60.6
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 1.1e-36 157.1 132 57.6
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 1.4e-36 156.8 118 62.7
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 1.4e-36 156.8 121 62.8
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 1.4e-36 156.8 128 58.6
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.4e-36 156.8 118 61.9
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 1.9e-36 156.4 148 54.7
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 2.4e-36 156.0 118 63.6
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 2.4e-36 156.0 141 55.3
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 3.2e-36 155.6 130 60.8
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 3.2e-36 155.6 130 60.8
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 4.1e-36 155.2 158 51.3
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 5.4e-36 154.8 144 54.9
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 7.1e-36 154.5 136 56.6
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 1.2e-35 153.7 129 60.5
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 1.6e-35 153.3 104 66.3
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 2.1e-35 152.9 122 59.8
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 2.7e-35 152.5 148 51.4
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 2.7e-35 152.5 148 51.4
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 2.7e-35 152.5 125 57.6
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 3.5e-35 152.1 120 62.5
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 6.0e-35 151.4 153 52.9
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 6.0e-35 151.4 147 54.4
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 7.8e-35 151.0 125 57.6
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 7.8e-35 151.0 117 61.5
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 7.8e-35 151.0 103 66.0
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 1.0e-34 150.6 122 57.4
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 1.0e-34 150.6 157 49.7
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 1.7e-34 149.8 148 50.0
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 1.7e-34 149.8 119 62.2
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 3.0e-34 149.1 128 56.2
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 3.9e-34 148.7 106 63.2
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 3.9e-34 148.7 135 55.6
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 3.9e-34 148.7 130 53.8
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 5.1e-34 148.3 119 59.7
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 6.6e-34 147.9 156 50.6
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 1.1e-33 147.1 117 59.0
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 1.1e-33 147.1 170 48.8
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 1.1e-33 147.1 102 65.7
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 1.1e-33 147.1 157 49.0
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 1.5e-33 146.7 164 50.0
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 1.5e-33 146.7 164 50.0
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 1.9e-33 146.4 125 55.2
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 1.9e-33 146.4 155 49.0
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 1.9e-33 146.4 115 60.9
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 3.3e-33 145.6 133 51.9
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 5.6e-33 144.8 134 54.5
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 5.6e-33 144.8 157 49.0
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 7.3e-33 144.4 129 55.8
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 9.5e-33 144.1 118 60.2
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 1.6e-32 143.3 210 41.9
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 3.6e-32 142.1 119 57.1
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 8.1e-32 141.0 211 42.7
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 1.8e-31 139.8 150 50.0
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 8.9e-31 137.5 119 53.8
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 5.8e-30 134.8 95 64.2
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 5.8e-30 134.8 128 50.0
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 9.9e-30 134.0 163 46.0
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 1.6e-27 126.7 159 41.5
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 2.1e-27 126.3 104 54.8
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 4.6e-27 125.2 131 48.9
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 1.9e-25 119.8 115 48.7
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 3.6e-24 115.5 56 83.9
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 4.7e-24 115.2 68 70.6
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 5.8e-22 108.2 51 88.2
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 1.7e-21 106.7 53 83.0
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 4.9e-21 105.1 53 81.1
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 6.6e-18 94.7 118 44.1
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 1.6e-11 73.6 34 82.4
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 1.1e-09 67.4 65 47.7
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 5.6e-09 65.1 102 35.3
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 7.3e-09 64.7 105 35.2
MELO3C020311.2 Cucumis melo HOM05D007646 ORTHO05D004022 9.6e-09 64.3 43 67.4
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 4.8e-08 62.0 102 33.3
unitig_748.g8495 Utricularia gibba HOM05D007646 ORTHO05D004022 4.8e-08 62.0 44 61.4
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 1.1e-07 60.8 100 34.0
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 1.4e-07 60.5 102 32.4
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 1.4e-07 60.5 102 32.4
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 1.8e-07 60.1 106 33.0
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 2.4e-07 59.7 103 33.0
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 3.1e-07 59.3 102 33.3
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 4.0e-07 58.9 102 33.3
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 4.0e-07 58.9 102 33.3
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 5.3e-07 58.5 105 31.4
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 5.3e-07 58.5 102 33.3
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 5.3e-07 58.5 108 31.5
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 1.2e-06 57.4 102 31.4
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 1.2e-06 57.4 102 31.4
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.2e-06 57.4 108 30.6
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 1.5e-06 57.0 141 29.1
arahy.Tifrunner.gnm1.ann1.GY8AT6 Arachis hypogaea HOM05D007710 ORTHO05D004022 2.0e-06 56.6 102 31.4
arahy.Tifrunner.gnm1.ann1.U0IDC3 Arachis hypogaea HOM05D007710 ORTHO05D004022 2.0e-06 56.6 102 31.4
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 2.0e-06 56.6 103 31.1
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 2.0e-06 56.6 102 31.4
Lj3g0011322 Lotus japonicus HOM05D007710 ORTHO05D004022 2.0e-06 56.6 102 32.4
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 2.6e-06 56.2 102 30.4
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 2.6e-06 56.2 103 31.1
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 2.6e-06 56.2 147 29.9
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 3.4e-06 55.8 103 31.1
Phvul.011G019000 Phaseolus vulgaris HOM05D007710 ORTHO05D004022 3.4e-06 55.8 102 31.4
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 4.5e-06 55.5 102 30.4
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 4.5e-06 55.5 103 31.1
BolC6t38987H Brassica oleracea HOM05D007710 ORTHO05D004022 4.5e-06 55.5 103 32.0
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 4.5e-06 55.5 103 32.0
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 5.8e-06 55.1 100 32.0
TPR.G19627 Trifolium pratense HOM05D007710 ORTHO05D004022 5.8e-06 55.1 102 30.4
Ah.04g156350 Amaranthus hybridus HOM05D007710 ORTHO05D004022 7.6e-06 54.7 130 28.5
ATR0057G097 Amborella trichopoda HOM05D007710 ORTHO05D004022 7.6e-06 54.7 106 33.0
Cre13.g605700 Chlamydomonas reinhardtii HOM05D007646 ORTHO05D004022 7.6e-06 54.7 106 30.2
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 7.6e-06 54.7 103 33.0
Hund09805 Selenicereus undatus HOM05D007710 ORTHO05D004022 7.6e-06 54.7 102 31.4
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 9.9e-06 54.3 105 30.5
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 9.9e-06 54.3 102 30.4
PGSC0003DMG400003164 Solanum tuberosum HOM05D007710 ORTHO05D004022 9.9e-06 54.3 115 29.6
PGSC0003DMG402026486 Solanum tuberosum HOM05D007710 ORTHO05D004022 9.9e-06 54.3 115 29.6
THA.LOC104805715 Tarenaya hassleriana HOM05D007710 ORTHO05D004022 9.9e-06 54.3 107 29.0


User provided reference genes

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