Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p18880 Brassica napus HOM05D009615 ORTHO05D011760 3.4e-68 261.5 132 100.0
BraA07t29596Z Brassica rapa HOM05D009615 ORTHO05D011760 3.4e-68 261.5 132 100.0
BolC4t23814H Brassica oleracea HOM05D009615 ORTHO05D011760 2.1e-62 242.3 132 90.9
C04p23190 Brassica napus HOM05D009615 ORTHO05D011760 2.2e-38 162.5 148 66.2
A07p18870 Brassica napus HOM05D009615 ORTHO05D011760 1.7e-35 152.9 133 66.9
BraA07t29594Z Brassica rapa HOM05D009615 ORTHO05D011760 2.5e-34 149.1 133 65.4
Sp4g11120 Schrenkiella parvula HOM05D009615 ORTHO05D011760 1.1e-29 133.7 155 54.2
BolC4t23815H Brassica oleracea HOM05D009615 ORTHO05D011760 3.1e-29 132.1 133 63.2
Thhalv10017369m.g Eutrema salsugineum HOM05D009615 ORTHO05D011760 8.8e-24 114.0 153 49.0
AL4G21750 Arabidopsis lyrata HOM05D009615 ORTHO05D011760 4.5e-20 101.7 150 46.7
AT2G28330 Arabidopsis thaliana HOM05D009615 ORTHO05D011760 7.7e-20 100.9 157 44.6
CARHR121260 Cardamine hirsuta HOM05D009615 ORTHO05D011760 2.1e-17 92.8 151 45.0
Carub.0004s0923 Capsella rubella HOM05D009615 ORTHO05D011760 3.6e-17 92.0 160 43.8
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 3.5e-12 75.5 102 41.2
Aa31LG5G7890 Aethionema arabicum HOM05D009615 ORTHO05D011760 3.8e-11 72.0 126 37.3
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 1.8e-08 63.2 80 48.8
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 4.0e-08 62.0 78 48.7
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 6.7e-08 61.2 88 45.5
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 8.8e-08 60.8 103 40.8
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 5.7e-07 58.2 82 45.1
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 7.5e-07 57.8 81 44.4
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 1.3e-06 57.0 81 42.0
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 1.3e-06 57.0 94 39.4
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 2.2e-06 56.2 99 37.4
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 2.8e-06 55.8 103 37.9
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 3.7e-06 55.5 103 35.9
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 3.7e-06 55.5 80 37.5
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 4.8e-06 55.1 102 37.3
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 6.3e-06 54.7 82 37.8
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 6.3e-06 54.7 143 35.7
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 6.3e-06 54.7 98 36.7
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 8.2e-06 54.3 90 38.9


User provided reference genes

Program Settings