Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.9e-270 935.3 469 100.0
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 8.8e-244 846.7 470 92.6
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 7.2e-238 827.0 470 89.1
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 7.5e-235 817.0 469 88.1
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 2.2e-234 815.5 469 88.1
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 3.6e-229 798.1 470 86.4
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 3.4e-211 738.4 467 79.2
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 1.0e-191 673.7 471 73.5
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 4.3e-190 668.3 472 72.7
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 4.0e-188 661.8 481 71.9
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 2.9e-186 655.6 470 73.0
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 2.0e-179 632.9 469 67.0
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 6.4e-178 627.9 471 69.4
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 1.5e-166 590.1 471 62.8
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 8.0e-128 461.5 467 50.1
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 1.8e-127 460.3 480 50.6
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 5.7e-126 455.3 464 51.3
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 9.7e-126 454.5 465 48.6
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 1.3e-125 454.1 471 49.5
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 6.3e-125 451.8 467 48.0
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 1.4e-124 450.7 463 50.3
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 1.4e-124 450.7 465 49.2
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 5.3e-124 448.7 465 50.3
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 7.7e-123 444.9 465 47.7
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 1.1e-121 441.0 464 48.7
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 7.2e-121 438.3 462 47.4
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 2.1e-120 436.8 464 48.9
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.8e-119 433.7 462 48.3
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 2.0e-118 430.3 466 48.1
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 3.4e-118 429.5 464 49.6
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 9.7e-118 427.9 471 48.0
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.7e-117 427.2 469 48.8
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.1e-116 422.5 468 47.6
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 7.0e-116 421.8 472 47.2
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 4.5e-115 419.1 471 46.9
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 5.9e-115 418.7 468 47.2
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 6.5e-114 415.2 468 47.2
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 9.4e-113 411.4 467 47.3
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 2.1e-112 410.2 448 47.8
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 3.6e-112 409.5 461 49.2
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 4.7e-112 409.1 468 46.4
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 2.3e-111 406.8 469 47.1
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 3.0e-111 406.4 475 48.2
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 5.2e-111 405.6 511 43.2
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 5.2e-111 405.6 469 47.5
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 6.8e-111 405.2 503 43.3
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.2e-110 404.4 469 46.9
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 1.5e-110 404.1 470 47.0
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 2.6e-110 403.3 466 45.3
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 2.2e-109 400.2 458 46.3
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 3.7e-109 399.4 465 44.5
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.1e-108 396.4 470 46.8
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 7.0e-108 395.2 470 44.0
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 9.1e-108 394.8 466 45.9
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 1.2e-107 394.4 469 45.8
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.2e-107 394.4 466 46.4
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 2.7e-107 393.3 463 43.6
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 3.5e-107 392.9 466 45.7
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.0e-106 391.3 460 44.1
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.3e-106 391.0 461 44.7
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.5e-105 387.5 421 48.5
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.9e-105 387.1 477 45.7
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 3.3e-105 386.3 464 43.1
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 6.1e-104 382.1 458 45.6
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.0e-103 381.3 460 44.3
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 1.4e-103 380.9 456 44.7
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.8e-103 380.6 464 42.7
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 8.9e-103 378.3 467 43.9
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 2.0e-102 377.1 470 43.8
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 7.5e-102 375.2 464 42.7
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 7.5e-102 375.2 466 42.3
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 3.7e-101 372.9 463 43.2
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 3.2e-100 369.8 473 42.3
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 9.2e-100 368.2 372 48.7
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 1.2e-99 367.9 467 43.3
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 6.6e-98 362.1 473 43.8
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 1.9e-97 360.5 464 43.1
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 1.6e-96 357.5 473 43.6
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 1.0e-95 354.8 553 38.9
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 3.4e-94 349.7 450 42.7
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 8.3e-93 345.1 477 42.3
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 4.1e-92 342.8 464 40.9
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 6.0e-91 339.0 478 40.4
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 1.5e-89 334.3 474 39.9
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 4.7e-88 329.3 469 40.1
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 6.2e-88 328.9 500 39.0
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 4.0e-87 326.2 410 44.1
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 2.6e-86 323.6 467 41.1
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 1.7e-85 320.9 447 41.2
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 3.9e-82 309.7 471 37.8
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 3.3e-81 306.6 472 38.3
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 2.4e-76 290.4 378 42.9
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 2.1e-75 287.3 342 45.3
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 8.1e-72 275.4 366 40.4
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 6.8e-71 272.3 471 36.3
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 9.3e-68 261.9 425 35.8
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 1.2e-67 261.5 470 33.8
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 2.3e-66 257.3 465 34.4
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 6.6e-66 255.8 461 33.6
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 7.3e-65 252.3 485 34.0
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 2.1e-64 250.8 442 33.9
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.4e-63 247.3 372 36.0
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 7.1e-60 235.7 361 38.8
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.1e-57 228.4 216 52.3
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 2.6e-46 190.7 283 38.5
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 1.9e-41 174.5 189 45.5
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 2.0e-38 164.5 304 32.2
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 2.2e-32 144.4 458 28.2
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 7.7e-30 136.0 269 30.9
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.3e-24 118.6 224 31.7
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 5.9e-22 109.8 115 48.7
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 7.2e-20 102.8 248 28.6
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 3.6e-19 100.5 143 40.6
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 2.2e-16 91.3 151 37.7
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 4.1e-15 87.0 81 51.9
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 1.0e-13 82.4 191 31.4
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 4.2e-12 77.0 109 36.7
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 3.3e-09 67.4 439 23.7


User provided reference genes

Program Settings