Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p18280 Brassica napus HOM05D003866 ORTHO05D004508 2.0e-127 459.1 233 100.0
Sp4g10360 Schrenkiella parvula HOM05D003866 ORTHO05D004508 7.5e-119 430.6 233 93.6
BcaB01g03075 Brassica carinata HOM05D003866 ORTHO05D004508 5.9e-116 421.0 226 93.4
BolC3t15527H Brassica oleracea HOM05D003866 ORTHO05D004508 1.3e-115 419.9 229 91.3
BcaC01g04944 Brassica carinata HOM05D003866 ORTHO05D004508 3.8e-115 418.3 229 90.8
C03p31840 Brassica napus HOM05D003866 ORTHO05D004508 5.0e-115 417.9 229 90.4
Thhalv10017190m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 8.5e-115 417.2 233 90.6
BraA03t11870Z Brassica rapa HOM05D003866 ORTHO05D004508 1.5e-114 416.4 229 90.8
A03p26580 Brassica napus HOM05D003866 ORTHO05D004508 7.2e-114 414.1 229 90.4
Thhalv10017203m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 2.1e-113 412.5 226 92.0
AT2G27490 Arabidopsis thaliana HOM05D003866 ORTHO05D004508 1.0e-112 410.2 233 90.6
CARHR120140 Cardamine hirsuta HOM05D003866 ORTHO05D004508 1.4e-112 409.8 233 90.1
BcaB02g10095 Brassica carinata HOM05D003866 ORTHO05D004508 1.2e-111 406.8 231 90.0
AL4G21480 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 3.4e-111 405.2 233 88.8
Sp4g10280 Schrenkiella parvula HOM05D003866 ORTHO05D004508 6.6e-107 391.0 233 87.1
Aa31LG5G8830 Aethionema arabicum HOM05D003866 ORTHO05D004508 5.6e-106 387.9 226 86.7
Carub.0004s0812 Capsella rubella HOM05D003866 ORTHO05D004508 4.9e-94 348.2 204 88.2
CANSAT25G2840 Cannabis sativa HOM05D003866 ORTHO05D004508 6.0e-92 341.3 227 73.6
CANSAT25G0267 Cannabis sativa HOM05D003866 ORTHO05D004508 2.3e-91 339.3 227 73.1
GSVIVG01027965001 Vitis vinifera HOM05D003866 ORTHO05D004508 8.6e-91 337.4 228 72.8
Haze_04883 Corylus avellana HOM05D003866 ORTHO05D004508 3.3e-90 335.5 232 70.7
Atru.chr5.1203 Acer truncatum HOM05D003866 ORTHO05D004508 9.5e-90 334.0 226 72.1
Lalb_Chr04g0259781 Lupinus albus HOM05D003866 ORTHO05D004508 9.5e-90 334.0 225 72.0
arahy.Tifrunner.gnm1.ann1.44W6WI Arachis hypogaea HOM05D003866 ORTHO05D004508 2.1e-89 332.8 225 71.1
TWI14G1088 Tripterygium wilfordii HOM05D003866 ORTHO05D004508 2.8e-89 332.4 215 74.9
CiPaw.08G097800 Carya illinoinensis HOM05D003866 ORTHO05D004508 4.7e-89 331.6 226 70.8
Potri.010G206900 Populus trichocarpa HOM05D003866 ORTHO05D004508 4.7e-89 331.6 229 71.6
MD03G1282400 Malus domestica HOM05D003866 ORTHO05D004508 6.2e-89 331.3 226 72.1
Ciclev10022066m.g Citrus clementina HOM05D003866 ORTHO05D004508 3.1e-88 328.9 229 71.2
HanXRQChr04g0118161 Helianthus annuus HOM05D003866 ORTHO05D004508 4.0e-88 328.6 226 68.6
MD11G1303900 Malus domestica HOM05D003866 ORTHO05D004508 6.8e-88 327.8 226 71.2
Prupe.8G257100 Prunus persica HOM05D003866 ORTHO05D004508 1.5e-87 326.6 224 70.5
AL8G17300 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 2.0e-87 326.2 243 73.3
Eucgr.K03458 Eucalyptus grandis HOM05D003866 ORTHO05D004508 2.6e-87 325.9 230 71.7
Glyma.19G209400 Glycine max HOM05D003866 ORTHO05D004508 2.6e-87 325.9 222 71.6
Cfa005958 Carpinus fangiana HOM05D003866 ORTHO05D004508 3.4e-87 325.5 229 69.9
Ca_09142_v3 Cicer arietinum L. HOM05D003866 ORTHO05D004508 3.4e-87 325.5 225 70.7
HanXRQChr06g0163901 Helianthus annuus HOM05D003866 ORTHO05D004508 3.4e-87 325.5 226 67.7
EL10Ac4g07959 Beta vulgaris HOM05D003866 ORTHO05D004508 4.4e-87 325.1 229 69.0
Lsat_1_v5_gn_8_54720 Lactuca sativa HOM05D003866 ORTHO05D004508 5.8e-87 324.7 226 67.7
FAN15G0670 Fragaria x ananassa HOM05D003866 ORTHO05D004508 7.5e-87 324.3 224 70.5
PGSC0003DMG400027789 Solanum tuberosum HOM05D003866 ORTHO05D004508 9.8e-87 323.9 229 69.9
Rhsim13G0013000 Rhododendron simsii HOM05D003866 ORTHO05D004508 1.3e-86 323.6 226 70.8
Sopen11g008460 Solanum pennellii HOM05D003866 ORTHO05D004508 1.7e-86 323.2 226 70.4
Lj1g0017340 Lotus japonicus HOM05D003866 ORTHO05D004508 2.9e-86 322.4 230 69.1
Medtr7g108540 Medicago truncatula HOM05D003866 ORTHO05D004508 3.7e-86 322.0 225 69.3
Manes.13G006100 Manihot esculenta HOM05D003866 ORTHO05D004508 4.9e-86 321.6 227 69.6
Phvul.001G205200 Phaseolus vulgaris HOM05D003866 ORTHO05D004508 4.9e-86 321.6 222 69.8
Cpa.g.sc11.50 Carica papaya HOM05D003866 ORTHO05D004508 6.4e-86 321.2 226 68.6
AUR62022186 Chenopodium quinoa HOM05D003866 ORTHO05D004508 6.4e-86 321.2 227 69.2
Glyma.03G212300 Glycine max HOM05D003866 ORTHO05D004508 6.4e-86 321.2 222 70.7
Solyc11g013460.2 Solanum lycopersicum HOM05D003866 ORTHO05D004508 6.4e-86 321.2 226 70.4
arahy.Tifrunner.gnm1.ann1.AT77GA Arachis hypogaea HOM05D003866 ORTHO05D004508 1.1e-85 320.5 225 68.9
FvH4_2g25231 Fragaria vesca HOM05D003866 ORTHO05D004508 1.1e-85 320.5 224 69.6
Lj1A33G82 Lonicera japonica HOM05D003866 ORTHO05D004508 1.1e-85 320.5 224 68.3
Medtr2g014120 Medicago truncatula HOM05D003866 ORTHO05D004508 1.1e-85 320.5 225 68.9
RcHm_v2.0_Chr5g0006471 Rosa chinensis HOM05D003866 ORTHO05D004508 1.1e-85 320.5 224 69.6
Oeu024509.1 Olea europaea HOM05D003866 ORTHO05D004508 1.4e-85 320.1 226 67.3
VMungo1383G2803 Vigna mungo HOM05D003866 ORTHO05D004508 1.4e-85 320.1 223 69.5
TAR636G2430 Trochodendron aralioides HOM05D003866 ORTHO05D004508 1.9e-85 319.7 227 69.2
AUR62031891 Chenopodium quinoa HOM05D003866 ORTHO05D004508 2.4e-85 319.3 227 68.7
FvH4_3g05411 Fragaria vesca HOM05D003866 ORTHO05D004508 4.1e-85 318.5 226 69.5
ECA236G1731 Erigeron canadensis HOM05D003866 ORTHO05D004508 7.1e-85 317.8 226 65.0
FAN11G1587 Fragaria x ananassa HOM05D003866 ORTHO05D004508 7.1e-85 317.8 224 70.1
RcHm_v2.0_Chr6g0293371 Rosa chinensis HOM05D003866 ORTHO05D004508 9.2e-85 317.4 224 69.6
TPR.G9596 Trifolium pratense HOM05D003866 ORTHO05D004508 9.2e-85 317.4 225 68.9
Cc01_g20600 Coffea canephora HOM05D003866 ORTHO05D004508 1.2e-84 317.0 226 68.1
DCAR_024209 Daucus carota HOM05D003866 ORTHO05D004508 1.6e-84 316.6 226 67.7
CsaV3_4G000530 Cucumis sativus L. HOM05D003866 ORTHO05D004508 2.1e-84 316.2 228 66.2
Nitab4.5_0000051g0210 Nicotiana tabacum HOM05D003866 ORTHO05D004508 2.1e-84 316.2 229 68.6
Sed0016300 Sechium edule HOM05D003866 ORTHO05D004508 2.1e-84 316.2 231 64.5
MSTRG.18171 Avicennia marina HOM05D003866 ORTHO05D004508 3.5e-84 315.5 226 67.3
Dinv33030 Davidia involucrata HOM05D003866 ORTHO05D004508 3.5e-84 315.5 226 68.1
FAN27G2002 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.5e-84 315.5 224 69.2
Dinv19723 Davidia involucrata HOM05D003866 ORTHO05D004508 4.6e-84 315.1 226 68.6
Cc01_g06400 Coffea canephora HOM05D003866 ORTHO05D004508 6.0e-84 314.7 226 67.3
Manes.12G006300 Manihot esculenta HOM05D003866 ORTHO05D004508 6.0e-84 314.7 229 68.1
Nitab4.5_0004737g0020 Nicotiana tabacum HOM05D003866 ORTHO05D004508 6.0e-84 314.7 229 68.1
vmacro02471 Vaccinium macrocarpon HOM05D003866 ORTHO05D004508 6.0e-84 314.7 226 67.7
Migut.I00105 Erythranthe guttata HOM05D003866 ORTHO05D004508 7.8e-84 314.3 225 67.6
MBI19_g41921_MAGBIO Magnolia biondii HOM05D003866 ORTHO05D004508 7.8e-84 314.3 227 66.1
Nn4g25882 Nelumbo nucifera HOM05D003866 ORTHO05D004508 7.8e-84 314.3 223 67.7
Lj1C0G2 Lonicera japonica HOM05D003866 ORTHO05D004508 1.0e-83 313.9 218 69.3
SalBow2G1869 Salvia bowleyana HOM05D003866 ORTHO05D004508 1.0e-83 313.9 226 66.4
CSS0038127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 1.3e-83 313.5 226 68.1
RhsimUnG0168700 Rhododendron simsii HOM05D003866 ORTHO05D004508 1.3e-83 313.5 226 68.1
Sabra08G0038800 Salix brachista HOM05D003866 ORTHO05D004508 1.3e-83 313.5 227 68.3
Psat3g022720 Pisum sativum HOM05D003866 ORTHO05D004508 3.0e-83 312.4 225 68.4
Lj2A1190T61 Lonicera japonica HOM05D003866 ORTHO05D004508 5.1e-83 311.6 229 65.9
COL.COLO4_23391 Corchorus olitorius HOM05D003866 ORTHO05D004508 6.6e-83 311.2 230 70.0
Peaxi162Scf00140g01011 Petunia axillaris HOM05D003866 ORTHO05D004508 6.6e-83 311.2 226 69.9
Hund18125 Selenicereus undatus HOM05D003866 ORTHO05D004508 8.6e-83 310.8 224 69.2
CSS0036127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 1.1e-82 310.5 225 68.4
TAR365G0487 Trochodendron aralioides HOM05D003866 ORTHO05D004508 1.9e-82 309.7 227 66.5
CAN.G337.118 Capsicum annuum HOM05D003866 ORTHO05D004508 2.5e-82 309.3 215 70.7
Gohir.D12G010300 Gossypium hirsutum HOM05D003866 ORTHO05D004508 2.5e-82 309.3 228 68.0
Actinidia24328 Actinidia chinensis HOM05D003866 ORTHO05D004508 3.3e-82 308.9 212 72.6
PSO210G0692 Papaver somniferum HOM05D003866 ORTHO05D004508 3.3e-82 308.9 230 67.0
PSO832G2724 Papaver somniferum HOM05D003866 ORTHO05D004508 9.5e-82 307.4 230 66.1
Gohir.A12G010200 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.2e-81 307.0 228 67.1
Gohir.D04G003400 Gossypium hirsutum HOM05D003866 ORTHO05D004508 2.1e-81 306.2 226 68.1
PGSC0003DMG400027790 Solanum tuberosum HOM05D003866 ORTHO05D004508 2.1e-81 306.2 215 70.2
TAR365G0990 Trochodendron aralioides HOM05D003866 ORTHO05D004508 2.8e-81 305.8 215 69.3
Aqoxy5G00709 Aquilegia oxysepala HOM05D003866 ORTHO05D004508 3.6e-81 305.4 226 65.0
FvH4_7g06070 Fragaria vesca HOM05D003866 ORTHO05D004508 4.7e-81 305.1 226 66.8
Gorai.012G004500 Gossypium raimondii HOM05D003866 ORTHO05D004508 4.7e-81 305.1 215 70.2
Gorai.008G010300 Gossypium raimondii HOM05D003866 ORTHO05D004508 1.1e-80 303.9 228 67.1
Duzib133G0502 Durio zibethinus HOM05D003866 ORTHO05D004508 1.4e-80 303.5 215 69.8
Os01g0360600 Oryza sativa ssp. japonica HOM05D003866 ORTHO05D004508 1.4e-80 303.5 226 62.8
FAN24G3471 Fragaria x ananassa HOM05D003866 ORTHO05D004508 2.3e-80 302.8 202 72.8
unitig_8.g3710 Utricularia gibba HOM05D003866 ORTHO05D004508 5.2e-80 301.6 219 65.3
RcHm_v2.0_Chr7g0221651 Rosa chinensis HOM05D003866 ORTHO05D004508 1.2e-79 300.4 224 65.6
PGR031G3621 Punica granatum HOM05D003866 ORTHO05D004508 1.5e-79 300.1 268 59.7
SGA_v2.0_scaffold1G00383 Striga asiatica HOM05D003866 ORTHO05D004508 7.6e-79 297.7 224 65.2
ATR0706G042 Amborella trichopoda HOM05D003866 ORTHO05D004508 9.9e-79 297.4 229 63.3
Prupe.6G179600 Prunus persica HOM05D003866 ORTHO05D004508 1.7e-78 296.6 223 66.4
BcaC02g10889 Brassica carinata HOM05D003866 ORTHO05D004508 1.1e-74 283.9 147 96.6
Zm00001eb041190 Zea mays HOM05D003866 ORTHO05D004508 5.6e-74 281.6 226 59.7
FAN10G2101 Fragaria x ananassa HOM05D003866 ORTHO05D004508 2.1e-73 279.6 226 62.8
ClCG10G010790 Citrullus lanatus HOM05D003866 ORTHO05D004508 3.6e-73 278.9 308 48.4
arahy.Tifrunner.gnm1.ann1.9DBC1D Arachis hypogaea HOM05D003866 ORTHO05D004508 1.8e-72 276.6 228 62.7
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 3.4e-71 272.3 192 68.8
CDE09G0414 Ceratophyllum demersum HOM05D003866 ORTHO05D004508 4.4e-71 271.9 221 60.2
Thecc.01G295900 Theobroma cacao HOM05D003866 ORTHO05D004508 9.9e-71 270.8 207 64.7
Sabra10G0159700 Salix brachista HOM05D003866 ORTHO05D002218 1.3e-70 270.4 191 69.1
SEGI_05441 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 1.7e-70 270.0 218 60.1
RcHm_v2.0_Chr1g0333581 Rosa chinensis HOM05D003866 ORTHO05D004508 6.0e-68 261.5 227 59.9
Gohir.A05G412600 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.0e-67 260.8 218 61.5
Hund18126 Selenicereus undatus HOM05D003866 ORTHO05D004508 7.3e-66 254.6 192 64.6
Mapoly0028s0053 Marchantia polymorpha HOM05D003866 ORTHO05D004508 3.3e-58 229.2 222 52.7
RcHm_v2.0_Chr1g0334201 Rosa chinensis HOM05D003866 ORTHO05D004508 9.6e-58 227.6 152 73.0
SGA_v2.0_scaffold25G10945 Striga asiatica HOM05D003866 ORTHO05D004508 9.6e-58 227.6 182 63.2
Actinidia32233 Actinidia chinensis HOM05D003866 ORTHO05D004508 4.0e-56 222.2 176 63.6
SMO144G0118 Selaginella moellendorffii HOM05D003866 ORTHO05D004508 1.2e-55 220.7 219 51.6
Nn4g25856 Nelumbo nucifera HOM05D003866 ORTHO05D004508 2.0e-55 219.9 213 54.9
Pp3c2_13260 Physcomitrium patens HOM05D003866 ORTHO05D004508 4.9e-54 215.3 220 49.1
Potri.008G053601 Populus trichocarpa HOM05D003866 ORTHO05D004508 8.4e-54 214.5 133 78.9
AagrBONN_evm.TU.Sc2ySwM_228.2237 Anthoceros agrestis HOM05D003866 ORTHO05D004508 3.2e-53 212.6 221 49.3
Carub.0001s3498 Capsella rubella HOM05D003866 ORTHO05D004508 1.6e-52 210.3 134 81.3
FAN25G0878 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.6e-52 210.3 144 71.5
FAN20G0831 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.7e-49 199.1 124 78.2
EL10Ac1g00209 Beta vulgaris HOM05D003866 ORTHO05D004508 1.2e-47 194.1 171 58.5
MD12G1063200 Malus domestica HOM05D003866 ORTHO05D004508 6.0e-44 181.8 144 65.3
BolC4t23901H Brassica oleracea HOM05D003866 ORTHO05D004508 2.2e-41 173.3 109 85.3
Sc03g0003210 Simmondsia chinensis HOM05D003866 ORTHO05D004508 4.8e-41 172.2 153 55.6
SHI02446 Sapria himalayana HOM05D003866 ORTHO05D004508 1.8e-40 170.2 130 61.5
BraA07t29544Z Brassica rapa HOM05D003866 ORTHO05D004508 9.0e-40 167.9 102 88.2
Cre10.g436150 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 1.5e-39 167.2 202 46.0
Zm00001eb341290 Zea mays HOM05D003866 ORTHO05D004508 4.5e-39 165.6 141 56.0
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 2.9e-38 162.9 119 65.5
arahy.Tifrunner.gnm1.ann1.ZE4P1V Arachis hypogaea HOM05D003866 ORTHO05D004508 3.8e-38 162.5 146 57.5
BcaC02g10888 Brassica carinata HOM05D003866 ORTHO05D004508 1.3e-35 154.1 82 97.6
C04p24060 Brassica napus HOM05D003866 ORTHO05D004508 3.3e-34 149.4 95 85.3
arahy.Tifrunner.gnm1.ann1.86SF76 Arachis hypogaea HOM05D003866 ORTHO05D004508 2.8e-33 146.4 151 51.7
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 2.8e-33 146.4 189 41.8
RcHm_v2.0_Chr4g0419041 Rosa chinensis HOM05D003866 ORTHO05D004508 1.4e-32 144.1 125 60.8
Oeu047454.1 Olea europaea HOM05D003866 ORTHO05D004508 4.5e-31 139.0 85 78.8
arahy.Tifrunner.gnm1.ann1.VNWS1A Arachis hypogaea HOM05D003866 ORTHO05D004508 1.4e-29 134.0 104 59.6
HPP92_010697 Vanilla planifolia HOM05D001483 ORTHO05D001463 5.5e-29 132.1 191 41.4
QL12p026964 Quercus lobata HOM05D003866 ORTHO05D004508 9.4e-29 131.3 85 74.1
GSVIVG01010954001 Vitis vinifera HOM05D003866 ORTHO05D004508 3.6e-28 129.4 88 69.3
CAN.G174.11 Capsicum annuum HOM05D003866 ORTHO05D004508 7.4e-26 121.7 85 72.9
ClCG10G010800 Citrullus lanatus HOM05D003866 ORTHO05D004508 2.8e-25 119.8 85 67.1
Psat5g098240 Pisum sativum HOM05D001063 ORTHO05D000986 1.1e-24 117.9 111 57.7
MSTRG.21619 Avicennia marina HOM05D003866 ORTHO05D004508 9.1e-24 114.8 91 61.5
CAN.G255.6 Capsicum annuum HOM05D003866 ORTHO05D004508 1.0e-22 111.3 75 76.0
QL12p026975 Quercus lobata HOM05D003866 ORTHO05D004508 1.4e-21 107.5 74 68.9
SEGI_13628 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 1.9e-21 107.1 85 62.4
FAN06G0461 Fragaria x ananassa HOM05D003866 ORTHO05D004508 2.5e-21 106.7 85 64.7
FvH4_3g05410 Fragaria vesca HOM05D003866 ORTHO05D004508 3.2e-21 106.3 81 64.2
CAN.G255.7 Capsicum annuum HOM05D003866 ORTHO05D004508 1.1e-18 97.8 84 60.7
RcHm_v2.0_Chr6g0258301 Rosa chinensis HOM05D003866 ORTHO05D004508 1.7e-17 94.0 145 40.7
PRCOL_00003268 Prasinoderma coloniale HOM05D003001 ORTHO05D003494 1.8e-16 90.5 187 30.5
arahy.Tifrunner.gnm1.ann1.TVUZ4W Arachis hypogaea HOM05D003866 ORTHO05D004508 7.0e-16 88.6 79 59.5
MCO11G607 Micromonas commoda HOM05D003866 ORTHO05D004508 7.0e-16 88.6 220 30.9
DCAR_024210 Daucus carota HOM05D003866 ORTHO05D004508 4.5e-15 85.9 61 65.6
Cre13.g586250 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 6.5e-14 82.0 187 30.5
MD14G1128400 Malus domestica HOM05D003866 ORTHO05D004508 6.5e-14 82.0 51 74.5
RcHm_v2.0_Chr4g0419031 Rosa chinensis HOM05D003866 ORTHO05D004508 6.1e-12 75.5 81 48.1
ClCG10G010610 Citrullus lanatus HOM05D003866 ORTHO05D004508 1.0e-11 74.7 81 46.9
RcHm_v2.0_Chr1g0333451 Rosa chinensis HOM05D003866 ORTHO05D004508 1.5e-10 70.9 60 56.7
SHI02445 Sapria himalayana HOM05D003866 ORTHO05D004508 2.0e-10 70.5 60 61.7
HanXRQChr04g0118191 Helianthus annuus HOM05D003866 ORTHO05D004508 2.8e-09 66.6 67 52.2


User provided reference genes

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