Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 8.1e-75 284.3 219 100.0
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 3.1e-66 255.8 154 97.4
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 2.4e-58 229.6 151 91.4
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 1.3e-56 223.8 155 89.0
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 1.3e-56 223.8 155 89.0
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 1.3e-56 223.8 155 89.0
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 1.0e-53 214.2 159 79.2
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 3.9e-53 212.2 153 79.1
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 2.5e-52 209.5 153 79.1
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 1.8e-50 203.4 153 77.1
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 5.3e-50 201.8 154 78.6
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 9.1e-50 201.1 146 74.0
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 9.1e-50 201.1 155 76.8
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 1.7e-48 196.8 162 77.2
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 2.5e-47 193.0 144 77.1
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 1.3e-43 180.6 166 63.3
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 2.6e-41 172.9 154 69.5
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 3.4e-41 172.6 96 89.6
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 2.5e-39 166.4 108 75.9
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 3.2e-39 166.0 106 75.5
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 6.1e-38 161.8 106 74.5
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 1.8e-37 160.2 143 59.4
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 3.9e-37 159.1 101 77.2
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 6.7e-37 158.3 142 61.3
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 2.0e-36 156.8 114 71.1
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 3.3e-36 156.0 100 75.0
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 3.3e-36 156.0 103 74.8
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 4.4e-36 155.6 145 57.9
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 5.7e-36 155.2 152 54.6
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 9.7e-36 154.5 148 58.8
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 1.3e-35 154.1 143 60.1
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 1.7e-35 153.7 102 74.5
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 2.8e-35 152.9 134 65.7
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 3.7e-35 152.5 149 57.7
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 3.7e-35 152.5 149 57.7
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 4.8e-35 152.1 153 55.6
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 4.8e-35 152.1 140 60.0
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 4.8e-35 152.1 100 76.0
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 6.3e-35 151.8 149 55.7
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 6.3e-35 151.8 146 56.2
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 6.3e-35 151.8 101 74.3
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 6.3e-35 151.8 108 72.2
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 1.1e-34 151.0 105 74.3
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 1.4e-34 150.6 127 63.0
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 1.8e-34 150.2 127 63.8
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 2.4e-34 149.8 149 55.0
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 3.1e-34 149.4 160 56.9
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 5.3e-34 148.7 146 55.5
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 9.1e-34 147.9 110 70.0
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 1.6e-33 147.1 104 70.2
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 1.6e-33 147.1 102 72.5
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 1.6e-33 147.1 103 70.9
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 1.6e-33 147.1 103 71.8
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.0e-33 146.7 110 69.1
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 2.0e-33 146.7 101 75.2
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 3.5e-33 146.0 146 54.1
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 4.5e-33 145.6 114 70.2
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 5.9e-33 145.2 110 68.2
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 5.9e-33 145.2 110 67.3
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 1.0e-32 144.4 152 54.6
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 1.7e-32 143.7 145 55.9
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 3.8e-32 142.5 153 52.3
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 5.0e-32 142.1 109 70.6
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 1.5e-31 140.6 102 71.6
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 1.9e-31 140.2 95 74.7
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 2.5e-31 139.8 105 69.5
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 2.5e-31 139.8 105 69.5
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 2.5e-31 139.8 116 62.1
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 4.2e-31 139.0 116 62.1
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 4.2e-31 139.0 153 52.3
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 5.5e-31 138.7 99 68.7
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 5.5e-31 138.7 99 68.7
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 5.5e-31 138.7 92 71.7
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 7.2e-31 138.3 99 68.7
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 9.4e-31 137.9 97 71.1
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 9.4e-31 137.9 103 71.8
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 9.4e-31 137.9 99 68.7
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 9.4e-31 137.9 99 68.7
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 1.2e-30 137.5 148 48.0
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 6.1e-30 135.2 153 49.0
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 6.1e-30 135.2 98 69.4
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 8.0e-30 134.8 91 73.6
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 1.0e-29 134.4 108 59.3
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 1.4e-29 134.0 108 63.9
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 1.4e-29 134.0 109 62.4
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 1.4e-29 134.0 149 59.7
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 1.4e-29 134.0 151 58.3
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 1.8e-29 133.7 105 67.6
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 1.8e-29 133.7 145 53.1
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 2.3e-29 133.3 152 51.3
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 5.2e-29 132.1 107 65.4
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 4.4e-28 129.0 144 48.6
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 9.7e-28 127.9 150 50.0
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 2.2e-27 126.7 102 66.7
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 4.8e-27 125.6 108 61.1
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 6.3e-27 125.2 96 68.8
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 1.4e-26 124.0 104 62.5
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 2.4e-26 123.2 88 67.0
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 3.1e-26 122.9 83 67.5
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 7.0e-26 121.7 100 65.0
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 9.1e-26 121.3 149 45.6
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 2.0e-25 120.2 100 64.0
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 1.7e-24 117.1 150 45.3
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 3.8e-24 115.9 88 64.8
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 4.2e-23 112.5 107 52.3
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 4.2e-23 112.5 108 52.8
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 3.6e-22 109.4 103 55.3
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 1.2e-20 104.4 109 53.2
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 2.7e-17 93.2 106 48.1
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 7.7e-17 91.7 81 59.3
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 9.5e-15 84.7 100 45.0
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 3.5e-09 66.2 51 62.7
COL.COLO4_19857 Corchorus olitorius HOM05D006639 ORTHO05D008339 1.3e-08 64.3 66 56.1
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.3e-08 64.3 49 63.3
Nn053s41924 Nelumbo nucifera HOM05D006639 ORTHO05D008339 2.3e-08 63.5 82 50.0
Nn1g05216 Nelumbo nucifera HOM05D006639 ORTHO05D008339 2.3e-08 63.5 82 50.0
Nn1g05215 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.0e-08 62.4 48 64.6
Lalb_Chr03g0028111 Lupinus albus HOM05D006639 ORTHO05D008339 7.3e-07 58.5 39 74.4
AUR62009752 Chenopodium quinoa HOM05D006639 ORTHO05D008339 2.8e-06 56.6 48 56.2


User provided reference genes

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