Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p17830 Brassica napus HOM05D002761 ORTHO05D016695 4.8e-76 287.7 143 100.0
A01p33970 Brassica napus HOM05D002761 ORTHO05D016695 5.3e-75 284.3 143 99.3
BolC9t53690H Brassica oleracea HOM05D002761 ORTHO05D016695 5.2e-38 161.4 98 86.7
BcaB04g19874 Brassica carinata HOM05D002761 ORTHO05D016695 1.4e-27 126.7 91 78.0
BcaC04g23493 Brassica carinata HOM05D002761 ORTHO05D016695 3.5e-26 122.1 84 82.1
C03p59090 Brassica napus HOM05D002761 ORTHO05D041670 1.1e-24 117.1 56 94.6
BolC3t18170H Brassica oleracea HOM05D002761 ORTHO05D041670 2.8e-23 112.5 56 92.9
C02p26430 Brassica napus HOM05D002761 ORTHO05D016695 4.7e-23 111.7 63 93.7
BolC2t08717H Brassica oleracea HOM05D002761 ORTHO05D016695 4.7e-23 111.7 63 93.7
C09p07730 Brassica napus HOM05D002761 ORTHO05D016695 3.1e-22 109.0 63 92.1
Sp1g20170 Schrenkiella parvula HOM05D002761 ORTHO05D003351 1.0e-17 94.0 60 81.7
A09p42070 Brassica napus HOM05D002761 ORTHO05D003351 3.0e-17 92.4 60 81.7
C05p21800 Brassica napus HOM05D002761 ORTHO05D003351 3.0e-17 92.4 60 81.7
BraA09t39693Z Brassica rapa HOM05D002761 ORTHO05D003351 3.0e-17 92.4 60 81.7
BolC5t33088H Brassica oleracea HOM05D002761 ORTHO05D003351 3.9e-17 92.0 60 81.7
BcaC06g34983 Brassica carinata HOM05D002761 ORTHO05D003351 6.6e-17 91.3 60 80.0
C07p20980 Brassica napus HOM05D002761 ORTHO05D003351 6.6e-17 91.3 60 80.0
BolC7t42629H Brassica oleracea HOM05D002761 ORTHO05D003351 6.6e-17 91.3 60 80.0
BraA07t29183Z Brassica rapa HOM05D002761 ORTHO05D003351 6.6e-17 91.3 60 78.3
A07p14260 Brassica napus HOM05D002761 ORTHO05D003351 8.6e-17 90.9 60 80.0
BolC5t30873H Brassica oleracea HOM05D002761 ORTHO05D003351 8.6e-17 90.9 60 80.0
BcaB03g14191 Brassica carinata HOM05D002761 ORTHO05D003351 1.1e-16 90.5 60 81.7
AT1G22660 Arabidopsis thaliana HOM05D002761 ORTHO05D003351 4.3e-16 88.6 63 74.6
Carub.0001s2218 Capsella rubella HOM05D002761 ORTHO05D003351 5.6e-16 88.2 63 74.6
AL1G36200 Arabidopsis lyrata HOM05D002761 ORTHO05D003351 1.2e-15 87.0 63 73.0
CARHR023030 Cardamine hirsuta HOM05D002761 ORTHO05D003351 2.8e-15 85.9 64 71.9
Thhalv10007128m.g Eutrema salsugineum HOM05D002761 ORTHO05D003351 4.7e-15 85.1 60 76.7
A08p03170 Brassica napus HOM05D002761 ORTHO05D003351 8.9e-14 80.9 67 67.2
BraA08t32349Z Brassica rapa HOM05D002761 ORTHO05D003351 8.9e-14 80.9 67 67.2
BcaC05g24852 Brassica carinata HOM05D002761 ORTHO05D003351 2.0e-13 79.7 60 70.0
C05p08980 Brassica napus HOM05D002761 ORTHO05D003351 2.0e-13 79.7 60 70.0
THA.LOC104809739 Tarenaya hassleriana HOM05D002761 ORTHO05D003351 1.9e-11 73.2 63 60.3
PSO063G6902 Papaver somniferum HOM05D002761 ORTHO05D003351 6.0e-10 68.2 63 57.1
PSO170G5134 Papaver somniferum HOM05D002761 ORTHO05D003351 1.0e-09 67.4 63 57.1
Solyc11g018770.3 Solanum lycopersicum HOM05D002761 ORTHO05D003351 2.3e-09 66.2 57 56.1
Sopen11g009950 Solanum pennellii HOM05D002761 ORTHO05D003351 2.3e-09 66.2 57 56.1
CARHR163300 Cardamine hirsuta HOM05D002761 ORTHO05D003351 3.0e-09 65.9 55 63.6
Oeu021213.2 Olea europaea HOM05D002761 ORTHO05D003351 3.0e-09 65.9 60 53.3
PSO832G2735 Papaver somniferum HOM05D002761 ORTHO05D003351 3.0e-09 65.9 72 54.2
Sopen11g009830 Solanum pennellii HOM05D002761 ORTHO05D003351 3.9e-09 65.5 57 56.1
Aa31LG7G6560 Aethionema arabicum HOM05D002761 ORTHO05D003351 5.1e-09 65.1 92 47.8
AL6G39960 Arabidopsis lyrata HOM05D002761 ORTHO05D003351 6.6e-09 64.7 63 60.3
ATR0584G032 Amborella trichopoda HOM05D002761 ORTHO05D003351 8.6e-09 64.3 62 48.4
MD10G1052700 Malus domestica HOM05D002761 ORTHO05D003351 8.6e-09 64.3 63 55.6
CAN.G761.16 Capsicum annuum HOM05D002761 ORTHO05D003351 1.1e-08 63.9 57 56.1
Nitab4.5_0001579g0100 Nicotiana tabacum HOM05D002761 ORTHO05D003351 1.1e-08 63.9 65 47.7
PSO210G0794 Papaver somniferum HOM05D002761 ORTHO05D003351 1.1e-08 63.9 63 55.6
Oeu045162.1 Olea europaea HOM05D002761 ORTHO05D003351 1.5e-08 63.5 60 51.7
EL10Ac1g00094 Beta vulgaris HOM05D002761 ORTHO05D003351 2.5e-08 62.8 63 49.2
AUR62004635 Chenopodium quinoa HOM05D002761 ORTHO05D003351 3.3e-08 62.4 64 50.0
Cc10_g11600 Coffea canephora HOM05D002761 ORTHO05D003351 5.6e-08 61.6 62 46.8
MELO3C019943.2 Cucumis melo HOM05D002761 ORTHO05D003351 5.6e-08 61.6 63 52.4
Manes.18G102400 Manihot esculenta HOM05D002761 ORTHO05D003351 7.3e-08 61.2 60 56.7
Migut.C01266 Erythranthe guttata HOM05D002761 ORTHO05D003351 9.5e-08 60.8 61 45.9
Peaxi162Scf01013g00232 Petunia axillaris HOM05D002761 ORTHO05D003351 9.5e-08 60.8 58 51.7
Atru.chr13.1730 Acer truncatum HOM05D002761 ORTHO05D003351 1.2e-07 60.5 59 52.5
CsaV3_6G004730 Cucumis sativus L. HOM05D002761 ORTHO05D003351 1.2e-07 60.5 63 52.4
Actinidia23337 Actinidia chinensis HOM05D002761 ORTHO05D003351 1.6e-07 60.1 58 48.3
Dinv15069 Davidia involucrata HOM05D002761 ORTHO05D003351 1.6e-07 60.1 60 50.0
Aqoxy5G00310 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 2.1e-07 59.7 63 47.6
ClCG08G008700 Citrullus lanatus HOM05D002761 ORTHO05D003351 2.1e-07 59.7 63 50.8
Nn5g27660 Nelumbo nucifera HOM05D002761 ORTHO05D003351 2.1e-07 59.7 63 44.4
Nitab4.5_0000167g0140 Nicotiana tabacum HOM05D002761 ORTHO05D003351 2.1e-07 59.7 61 47.5
Haze_01552 Corylus avellana HOM05D002761 ORTHO05D003351 2.8e-07 59.3 72 48.6
Sed0000900 Sechium edule HOM05D002761 ORTHO05D003351 2.8e-07 59.3 63 50.8
Cfa015122 Carpinus fangiana HOM05D002761 ORTHO05D003351 3.6e-07 58.9 63 50.8
Gohir.D05G253400 Gossypium hirsutum HOM05D002761 ORTHO05D003351 3.6e-07 58.9 61 50.8
Prupe.6G147900 Prunus persica HOM05D002761 ORTHO05D003351 3.6e-07 58.9 63 50.8
PGR042G3223 Punica granatum HOM05D002761 ORTHO05D003351 3.6e-07 58.9 57 56.1
Sed0017641 Sechium edule HOM05D002761 ORTHO05D003351 3.6e-07 58.9 63 49.2
TWI34G1193 Tripterygium wilfordii HOM05D002761 ORTHO05D003351 3.6e-07 58.9 64 48.4
GSVIVG01034848001 Vitis vinifera HOM05D002761 ORTHO05D003351 3.6e-07 58.9 59 50.8
AagrBONN_evm.TU.Sc2ySwM_344.827 Anthoceros agrestis HOM05D002761 ORTHO05D003351 4.7e-07 58.5 66 47.0
Gorai.009G263600 Gossypium raimondii HOM05D002761 ORTHO05D003351 4.7e-07 58.5 61 49.2
Sp4g24780 Schrenkiella parvula HOM05D002761 ORTHO05D016695 4.7e-07 58.5 63 47.6
TWI60G0671 Tripterygium wilfordii HOM05D002761 ORTHO05D003351 4.7e-07 58.5 64 50.0
TAR381G1193 Trochodendron aralioides HOM05D002761 ORTHO05D003351 4.7e-07 58.5 60 51.7
vmacro12482 Vaccinium macrocarpon HOM05D002761 ORTHO05D003351 4.7e-07 58.5 64 40.6
CARHR114710 Cardamine hirsuta HOM05D002761 ORTHO05D003351 6.2e-07 58.2 43 69.8
Lalb_Chr06g0161951 Lupinus albus HOM05D002761 ORTHO05D003351 6.2e-07 58.2 60 50.0
SGA_v2.0_scaffold118G32501 Striga asiatica HOM05D002761 ORTHO05D003351 6.2e-07 58.2 60 46.7
Gohir.A05G250400 Gossypium hirsutum HOM05D002761 ORTHO05D003351 8.1e-07 57.8 61 49.2
Sc01g0001830 Simmondsia chinensis HOM05D002761 ORTHO05D003351 8.1e-07 57.8 63 47.6
Atru.chr4.2860 Acer truncatum HOM05D002761 ORTHO05D003351 1.1e-06 57.4 59 50.8
CANSAT54G2022 Cannabis sativa HOM05D002761 ORTHO05D003351 1.1e-06 57.4 63 47.6
Phvul.007G088400 Phaseolus vulgaris HOM05D002761 ORTHO05D003351 1.1e-06 57.4 60 50.0
QL03p042862 Quercus lobata HOM05D002761 ORTHO05D003351 1.1e-06 57.4 58 51.7
CDE04G1174 Ceratophyllum demersum HOM05D002761 ORTHO05D003351 1.4e-06 57.0 63 44.4
Glyma.20G174400 Glycine max HOM05D002761 ORTHO05D003351 1.4e-06 57.0 60 48.3
SGA_v2.0_scaffold24G10561 Striga asiatica HOM05D002761 ORTHO05D003351 1.4e-06 57.0 60 46.7
arahy.Tifrunner.gnm1.ann1.3C4BUC Arachis hypogaea HOM05D002761 ORTHO05D003351 1.8e-06 56.6 60 50.0
arahy.Tifrunner.gnm1.ann1.SG3J5R Arachis hypogaea HOM05D002761 ORTHO05D003351 1.8e-06 56.6 60 50.0
BolC5t29644H Brassica oleracea HOM05D002761 ORTHO05D003351 1.8e-06 56.6 40 70.0
Eucgr.F03976 Eucalyptus grandis HOM05D002761 ORTHO05D003351 1.8e-06 56.6 61 45.9
Hma1.2p1_0523F.1_g172030 Hydrangea macrophylla HOM05D002761 ORTHO05D003351 1.8e-06 56.6 59 45.8
Hund27091 Selenicereus undatus HOM05D002761 ORTHO05D003351 1.8e-06 56.6 63 44.4
CiPaw.05G166400 Carya illinoinensis HOM05D002761 ORTHO05D003351 2.4e-06 56.2 63 47.6
Duzib177G0575 Durio zibethinus HOM05D002761 ORTHO05D003351 2.4e-06 56.2 60 48.3
Thecc.08G185200 Theobroma cacao HOM05D002761 ORTHO05D003351 2.4e-06 56.2 58 51.7
VMungo0720G1634 Vigna mungo HOM05D002761 ORTHO05D003351 2.4e-06 56.2 60 50.0
COL.COLO4_23637 Corchorus olitorius HOM05D002761 ORTHO05D003351 3.1e-06 55.8 61 49.2
FvH4_4g33440 Fragaria vesca HOM05D002761 ORTHO05D003351 3.1e-06 55.8 59 50.8
FAN12G1608 Fragaria x ananassa HOM05D002761 ORTHO05D003351 3.1e-06 55.8 59 50.8
Potri.013G111300 Populus trichocarpa HOM05D002761 ORTHO05D003351 3.1e-06 55.8 64 50.0
Ah.05g178240 Amaranthus hybridus HOM05D002761 ORTHO05D003351 4.0e-06 55.5 58 50.0
FAN07G1831 Fragaria x ananassa HOM05D002761 ORTHO05D003351 4.0e-06 55.5 59 50.8
Lj4A473G33 Lonicera japonica HOM05D002761 ORTHO05D003351 4.0e-06 55.5 60 43.3
MD05G1045700 Malus domestica HOM05D002761 ORTHO05D003351 4.0e-06 55.5 63 49.2
QL08p012793 Quercus lobata HOM05D002761 ORTHO05D003351 4.0e-06 55.5 63 47.6
QL08p012947 Quercus lobata HOM05D002761 ORTHO05D003351 4.0e-06 55.5 63 47.6
TPR.G15701 Trifolium pratense HOM05D002761 ORTHO05D003351 4.0e-06 55.5 60 46.7
arahy.Tifrunner.gnm1.ann1.8YT8MI Arachis hypogaea HOM05D002761 ORTHO05D003351 5.2e-06 55.1 57 50.9
arahy.Tifrunner.gnm1.ann1.Q9M74Z Arachis hypogaea HOM05D002761 ORTHO05D003351 5.2e-06 55.1 60 46.7
Glyma.10G217700 Glycine max HOM05D002761 ORTHO05D003351 5.2e-06 55.1 60 48.3
Lj5g0020162 Lotus japonicus HOM05D002761 ORTHO05D003351 5.2e-06 55.1 57 49.1
ECA238G1828 Erigeron canadensis HOM05D002761 ORTHO05D003351 6.8e-06 54.7 61 44.3
HPP92_003659 Vanilla planifolia HOM05D002761 ORTHO05D003351 6.8e-06 54.7 63 44.4
HPP92_003668 Vanilla planifolia HOM05D002761 ORTHO05D003351 6.8e-06 54.7 63 44.4
Ciclev10000691m.g Citrus clementina HOM05D002761 ORTHO05D003351 8.9e-06 54.3 60 45.0
RcHm_v2.0_Chr4g0411681 Rosa chinensis HOM05D002761 ORTHO05D003351 8.9e-06 54.3 60 48.3


User provided reference genes

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