Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-45 185.3 89 100.0
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 3.5e-40 167.9 81 100.0
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 3.5e-40 167.9 81 100.0
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-39 165.6 81 98.8
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-39 165.6 81 98.8
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.7e-39 165.6 81 98.8
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 3.8e-39 164.5 81 97.5
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-38 162.2 81 95.1
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-38 161.8 81 96.3
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 3.2e-38 161.4 81 95.1
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-37 159.5 81 95.1
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-36 155.2 81 93.8
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 2.3e-36 155.2 75 98.7
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-35 152.9 80 95.0
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-34 149.4 71 100.0
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 8.0e-29 130.2 82 78.0
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-28 127.5 82 78.0
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 5.2e-28 127.5 82 78.0
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 6.7e-28 127.1 82 78.0
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 6.7e-28 127.1 82 78.0
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-27 125.9 78 78.2
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-27 125.9 82 76.8
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-27 125.9 81 77.8
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.5e-27 125.9 82 76.8
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 2.6e-27 125.2 81 76.5
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 2.6e-27 125.2 81 76.5
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 2.6e-27 125.2 81 76.5
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 3.3e-27 124.8 80 76.2
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 5.7e-27 124.0 58 98.3
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 5.7e-27 124.0 81 76.5
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 5.7e-27 124.0 81 74.1
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 5.7e-27 124.0 81 74.1
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 9.7e-27 123.2 82 75.6
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 1.3e-26 122.9 81 72.8
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 2.2e-26 122.1 81 72.8
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-25 119.8 82 75.6
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 1.1e-25 119.8 81 72.8
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-25 119.4 82 73.2
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-25 119.4 81 74.1
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-25 119.0 75 78.7
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-25 118.6 82 75.6
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 7.7e-24 113.6 79 72.2
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 1.3e-23 112.8 75 76.0
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.2e-21 106.3 79 65.8
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 2.7e-21 105.1 69 76.8
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 2.7e-21 105.1 69 76.8
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 6.1e-21 104.0 69 75.4
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 6.1e-21 104.0 69 75.4
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-20 102.1 77 64.9
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 6.8e-20 100.5 68 73.5
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-19 99.8 68 70.6
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 5.7e-19 97.4 76 64.5
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 2.0e-16 89.0 80 56.2
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 2.0e-16 89.0 80 56.2
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 2.0e-16 89.0 54 77.8
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 2.0e-16 89.0 54 77.8
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 2.0e-16 89.0 54 77.8
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 2.7e-16 88.6 80 56.2
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 2.7e-16 88.6 80 56.2
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 7.7e-16 87.0 67 64.2
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-15 85.1 80 51.2
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 8.6e-15 83.6 81 55.6
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-14 82.8 46 82.6
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 2.5e-14 82.0 46 82.6
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 4.2e-14 81.3 69 55.1
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 5.5e-14 80.9 46 80.4
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-13 79.7 58 62.1
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 2.1e-13 79.0 60 68.3
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 3.6e-13 78.2 56 66.1
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 6.1e-13 77.4 80 47.5
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 8.0e-13 77.0 81 48.1
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-12 76.6 37 94.6
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 5.2e-12 74.3 52 67.3
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 8.9e-12 73.6 66 54.5
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-11 72.4 66 53.0
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 2.0e-11 72.4 66 53.0
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 2.6e-11 72.0 66 53.0
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 2.6e-11 72.0 66 53.0
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-11 72.0 66 53.0
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-11 72.0 66 53.0
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 2.6e-11 72.0 66 53.0
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 2.6e-11 72.0 66 53.0
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 7.5e-11 70.5 66 50.0
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 9.8e-11 70.1 37 83.8
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.1e-09 66.6 73 45.2
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-09 65.9 37 81.1
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 5.4e-09 64.3 55 50.9
BcaC01g00876 Brassica carinata HOM05D004128 ORTHO05D008395 9.2e-09 63.5 37 78.4
BolC6t37270H Brassica oleracea HOM05D004128 ORTHO05D008395 4.5e-08 61.2 37 78.4
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.0e-07 60.1 57 49.1
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 2.9e-07 58.5 40 72.5
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 5.0e-07 57.8 70 40.0
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 1.1e-06 56.6 76 44.7
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.1e-06 56.6 81 45.7
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.1e-06 56.6 81 45.7
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 1.5e-06 56.2 80 36.2
Sp3g27700 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.9e-06 55.8 56 46.4
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 1.9e-06 55.8 56 44.6


User provided reference genes

Program Settings