Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p17600 Brassica napus HOM05D003513 ORTHO05D013524 5.6e-107 391.0 200 100.0
A06p48950 Brassica napus HOM05D003513 ORTHO05D013524 4.2e-94 348.2 174 100.0
A03p63010 Brassica napus HOM05D003513 ORTHO05D013524 2.5e-70 269.2 200 75.5
C07p28040 Brassica napus HOM05D003513 ORTHO05D013524 2.5e-70 269.2 200 75.5
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 3.5e-64 248.8 196 73.5
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 8.5e-63 244.2 155 85.2
BraA04t16944Z Brassica rapa HOM05D003513 ORTHO05D013524 8.5e-63 244.2 196 71.9
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 4.2e-62 241.9 155 85.2
A06p18750 Brassica napus HOM05D003513 ORTHO05D013524 9.4e-62 240.7 196 71.4
A04p12810 Brassica napus HOM05D003513 ORTHO05D013524 1.0e-60 237.3 158 82.9
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 9.8e-51 204.1 216 61.1
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 2.4e-41 172.9 204 55.9
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 5.6e-38 161.8 123 75.6
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 5.6e-38 161.8 123 75.6
BraA09t39125Z Brassica rapa HOM05D003513 ORTHO05D013524 4.0e-36 155.6 139 63.3
A08p23090 Brassica napus HOM05D003513 ORTHO05D013524 2.0e-35 153.3 78 96.2
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 3.7e-34 149.1 131 67.2
C06p18700 Brassica napus HOM05D003513 ORTHO05D013524 1.4e-33 147.1 144 60.4
BraA07t29479Z Brassica rapa HOM05D003513 ORTHO05D013524 1.4e-33 147.1 96 77.1
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 1.8e-33 146.7 119 70.6
A08p11950 Brassica napus HOM05D003513 ORTHO05D004660 2.7e-32 142.9 93 81.7
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 1.7e-31 140.2 144 61.1
A07p18740 Brassica napus HOM05D003513 ORTHO05D012646 5.0e-31 138.7 70 95.7
BcaB05g23799 Brassica carinata HOM05D003513 ORTHO05D004660 1.5e-30 137.1 119 67.2
BolC9t57326H Brassica oleracea HOM05D004336 ORTHO05D005367 7.8e-24 114.8 110 60.0
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 1.3e-23 114.0 136 55.9
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 1.9e-22 110.2 102 64.7
BcaB06g26524 Brassica carinata HOM05D005554 ORTHO05D021652 1.4e-20 104.0 87 65.5
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.2e-19 100.9 123 56.1
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 4.4e-19 99.0 81 65.4
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 5.8e-19 98.6 117 53.0
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 7.5e-19 98.2 86 61.6
BraA05t21193Z Brassica rapa HOM05D003513 ORTHO05D004660 9.9e-19 97.8 68 77.9
BcaC06g33105 Brassica carinata HOM05D005554 ORTHO05D021652 1.7e-18 97.1 80 65.0
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 8.3e-18 94.7 115 51.3
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 1.1e-17 94.4 121 52.9
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 1.1e-17 94.4 123 53.7
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 2.3e-15 86.7 122 52.5
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 7.3e-14 81.6 122 49.2
A02p25610 Brassica napus HOM05D019610 ORTHO05D097646 4.7e-13 79.0 39 92.3
BcaB02g08136 Brassica carinata HOM05D003513 ORTHO05D004660 2.4e-12 76.6 52 75.0
A08p11330 Brassica napus HOM05D019610 ORTHO05D097521 6.8e-12 75.1 40 87.5
C06p15550 Brassica napus HOM05D019610 ORTHO05D103050 6.8e-12 75.1 40 87.5
A09p33580 Brassica napus HOM05D019610 ORTHO05D099271 2.0e-11 73.6 40 85.0
A05p38730 Brassica napus HOM05D000051 ORTHO05D033618 9.2e-09 64.7 50 72.0
BcaB07g30213 Brassica carinata HOM05D005554 ORTHO05D021652 1.2e-08 64.3 46 69.6
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 1.0e-07 61.2 114 44.7
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 1.0e-07 61.2 110 44.5
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.7e-07 60.5 120 39.2
A02p38950 Brassica napus HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
A05p28350 Brassica napus HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
A09p17340 Brassica napus HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
A09p66900 Brassica napus HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
A10p10220 Brassica napus HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
C06p23980 Brassica napus HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
BraA03t13865Z Brassica rapa HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
BraA06t25935Z Brassica rapa HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
BraA09t37362Z Brassica rapa HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2
BraA10t43101Z Brassica rapa HOM05D010800 ORTHO05D012646 7.3e-06 55.1 26 96.2


User provided reference genes

Program Settings