Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 7.5e-59 230.3 118 100.0
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 7.5e-59 230.3 118 100.0
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 3.9e-55 218.0 118 94.9
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 1.5e-54 216.1 118 94.1
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 1.5e-54 216.1 118 94.1
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 3.0e-47 191.8 127 80.3
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 2.6e-43 178.7 119 79.0
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 2.6e-43 178.7 118 78.8
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 1.9e-41 172.6 118 78.0
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 3.5e-40 168.3 118 76.3
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 1.3e-39 166.4 116 75.0
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 6.6e-39 164.1 120 73.3
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 4.0e-36 154.8 120 73.3
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 4.0e-36 154.8 120 73.3
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 4.9e-34 147.9 117 69.2
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.2e-29 133.3 124 63.7
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 2.1e-24 115.9 124 56.5
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 1.3e-23 113.2 134 58.2
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 3.0e-23 112.1 66 86.4
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 6.6e-23 110.9 126 54.8
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 8.7e-23 110.5 64 87.5
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 2.5e-22 109.0 124 55.6
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 4.3e-22 108.2 124 57.3
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 5.6e-22 107.8 125 57.6
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.3e-21 106.7 125 55.2
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 3.6e-21 105.1 66 77.3
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 1.8e-20 102.8 126 49.2
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 3.1e-20 102.1 123 53.7
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 4.0e-20 101.7 93 62.4
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 4.0e-20 101.7 124 53.2
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 5.3e-20 101.3 124 52.4
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 9.0e-20 100.5 130 50.8
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.2e-19 100.1 78 69.2
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 1.2e-19 100.1 129 53.5
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 1.5e-19 99.8 125 49.6
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 1.5e-19 99.8 131 48.1
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 2.0e-19 99.4 132 49.2
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 2.0e-19 99.4 124 51.6
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.0e-19 99.4 78 67.9
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 2.6e-19 99.0 129 49.6
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 2.6e-19 99.0 119 52.9
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 5.8e-19 97.8 123 50.4
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 9.9e-19 97.1 132 49.2
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 2.2e-18 95.9 121 53.7
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 2.9e-18 95.5 127 51.2
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 3.8e-18 95.1 146 47.3
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 3.8e-18 95.1 116 50.9
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 4.9e-18 94.7 127 52.0
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 4.9e-18 94.7 130 48.5
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 6.4e-18 94.4 122 50.0
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 8.4e-18 94.0 86 60.5
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.1e-17 93.6 127 51.2
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.1e-17 93.6 83 63.9
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.4e-17 93.2 104 55.8
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 3.2e-17 92.0 89 58.4
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 5.4e-17 91.3 104 52.9
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 7.1e-17 90.9 127 46.5
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 9.3e-17 90.5 148 47.3
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 1.2e-16 90.1 132 47.7
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 1.2e-16 90.1 130 49.2
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 4.6e-16 88.2 108 51.9
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.0e-16 87.8 130 47.7
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.0e-16 87.8 130 46.2
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 1.0e-15 87.0 130 47.7
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.0e-15 87.0 126 50.0
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 1.0e-15 87.0 74 62.2
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.0e-15 85.5 110 50.9
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 3.9e-15 85.1 101 51.5
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 8.7e-15 84.0 124 46.8
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.1e-14 83.6 109 48.6
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-14 83.6 109 48.6
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 1.1e-14 83.6 121 46.3
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 2.5e-14 82.4 68 63.2
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 2.5e-14 82.4 109 49.5
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 3.3e-14 82.0 89 57.3
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 7.4e-14 80.9 82 58.5
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 9.6e-14 80.5 127 46.5
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.6e-13 79.7 74 55.4
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.8e-13 79.0 61 67.2
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.8e-13 79.0 128 44.5
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 3.7e-13 78.6 75 54.7
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 4.8e-13 78.2 131 41.2
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 6.2e-13 77.8 120 45.8
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.4e-12 76.6 126 46.0
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 1.8e-12 76.3 134 44.8
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 2.4e-12 75.9 83 55.4
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 2.4e-12 75.9 123 39.0
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 4.0e-12 75.1 114 49.1
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.0e-12 75.1 72 61.1
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 4.0e-12 75.1 90 50.0
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.3e-12 74.7 106 50.0
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 9.0e-12 73.9 62 64.5
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 3.4e-11 72.0 126 44.4
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 3.4e-11 72.0 124 45.2
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 4.5e-11 71.6 122 41.0
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 1.7e-10 69.7 107 43.0
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 4.9e-10 68.2 109 44.0
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 4.9e-10 68.2 81 50.6
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 4.9e-10 68.2 142 40.1
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 6.4e-10 67.8 85 48.2
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 1.1e-09 67.0 61 59.0
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.1e-09 67.0 86 47.7
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 1.4e-09 66.6 130 40.0
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 1.9e-09 66.2 86 46.5
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 2.4e-09 65.9 86 47.7
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 4.2e-09 65.1 94 45.7
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 9.3e-09 63.9 118 44.1
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 1.2e-08 63.5 50 70.0
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 1.2e-08 63.5 76 51.3
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.6e-08 63.2 102 45.1
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 2.7e-08 62.4 78 50.0
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 2.7e-08 62.4 126 36.5
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 4.6e-08 61.6 108 41.7
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 4.6e-08 61.6 160 36.9
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 6.0e-08 61.2 58 53.4
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 3.0e-07 58.9 65 53.8
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 3.9e-07 58.5 61 55.7
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.9e-06 56.2 86 44.2
Sc03g0002950 Simmondsia chinensis HOM05D006100 ORTHO05D007539 5.6e-06 54.7 58 55.2


User provided reference genes

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