Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p17090 Brassica napus HOM05D011153 ORTHO05D013195 2.2e-46 188.7 102 100.0
BraA07t29436Z Brassica rapa HOM05D011153 ORTHO05D013195 6.3e-46 187.2 102 99.0
BcaC06g34752 Brassica carinata HOM05D011153 ORTHO05D013195 1.8e-45 185.7 102 89.2
C07p24950 Brassica napus HOM05D011153 ORTHO05D013195 1.8e-45 185.7 102 89.2
BolC7t43025H Brassica oleracea HOM05D011153 ORTHO05D013195 1.8e-45 185.7 102 89.2
BcaB04g20100 Brassica carinata HOM05D011153 ORTHO05D013195 9.2e-21 103.6 75 69.3
Thhalv10005479m.g Eutrema salsugineum HOM05D011153 ORTHO05D013195 1.2e-20 103.2 72 69.4
A09p09760 Brassica napus HOM05D011153 ORTHO05D013195 2.0e-20 102.4 75 68.0
C09p11520 Brassica napus HOM05D011153 ORTHO05D013195 2.0e-20 102.4 75 68.0
BolC9t54042H Brassica oleracea HOM05D011153 ORTHO05D013195 2.0e-20 102.4 75 68.0
BraA09t36623Z Brassica rapa HOM05D011153 ORTHO05D013195 2.0e-20 102.4 75 68.0
Sp2g29850 Schrenkiella parvula HOM05D011153 ORTHO05D013195 3.8e-19 98.2 71 69.0
AL8G44620 Arabidopsis lyrata HOM05D011153 ORTHO05D013195 8.6e-19 97.1 73 69.9
AT5G66816 Arabidopsis thaliana HOM05D011153 ORTHO05D013195 1.1e-18 96.7 70 71.4
CARHR280870 Cardamine hirsuta HOM05D011153 ORTHO05D013195 7.3e-18 94.0 74 64.9
BcaB04g20099 Brassica carinata HOM05D011153 ORTHO05D013195 2.2e-14 82.4 56 69.6
BcaC04g23162 Brassica carinata HOM05D011153 ORTHO05D013195 2.2e-14 82.4 56 69.6
Aa31LG4G18770 Aethionema arabicum HOM05D011235 ORTHO05D012940 5.6e-10 67.8 82 53.7
AL5G30750 Arabidopsis lyrata HOM05D011235 ORTHO05D012940 9.5e-10 67.0 82 53.7
Carub.0008s2768 Capsella rubella HOM05D011153 ORTHO05D013195 1.6e-09 66.2 101 39.6
AT3G50610 Arabidopsis thaliana HOM05D011235 ORTHO05D012940 2.1e-09 65.9 81 50.6
BcaC07g39521 Brassica carinata HOM05D011235 ORTHO05D012940 2.1e-09 65.9 83 53.0
C08p25660 Brassica napus HOM05D011235 ORTHO05D012940 2.1e-09 65.9 83 53.0
A09p43630 Brassica napus HOM05D011235 ORTHO05D012940 8.0e-09 63.9 83 51.8
BcaB01g00606 Brassica carinata HOM05D011235 ORTHO05D012940 2.3e-08 62.4 83 50.6
BcaC09g50044 Brassica carinata HOM05D011235 ORTHO05D012940 1.2e-07 60.1 54 59.3
C01p29650 Brassica napus HOM05D011235 ORTHO05D012940 1.2e-07 60.1 54 59.3
BolC1t02907H Brassica oleracea HOM05D011235 ORTHO05D012940 1.2e-07 60.1 54 59.3
BraA09t39824Z Brassica rapa HOM05D011235 ORTHO05D012940 1.5e-07 59.7 83 50.6
BraA01t02308Z Brassica rapa HOM05D011235 ORTHO05D012940 4.4e-07 58.2 54 57.4
CARHR160110 Cardamine hirsuta HOM05D011235 ORTHO05D012940 7.5e-07 57.4 63 54.0
Thhalv10010927m.g Eutrema salsugineum HOM05D011235 ORTHO05D012940 9.8e-07 57.0 42 64.3
Carub.0005s1692 Capsella rubella HOM05D011235 ORTHO05D012940 3.7e-06 55.1 62 51.6


User provided reference genes

Program Settings