Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p16540 Brassica napus HOM05D005407 ORTHO05D006544 2.8e-116 422.5 321 100.0
BraA07t29378Z Brassica rapa HOM05D005407 ORTHO05D006544 5.0e-105 385.2 301 99.7
BolC7t42952H Brassica oleracea HOM05D005407 ORTHO05D006544 7.4e-101 371.3 301 90.0
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 8.5e-81 304.7 317 73.8
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 4.7e-79 298.9 268 83.6
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 6.1e-79 298.5 268 75.0
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 1.8e-78 297.0 268 84.3
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 4.0e-78 295.8 274 78.1
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 5.2e-78 295.4 268 72.4
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 5.2e-78 295.4 268 72.4
BcaC04g23209 Brassica carinata HOM05D005407 ORTHO05D006544 6.8e-78 295.0 267 83.5
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 1.5e-77 293.9 268 72.0
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 8.3e-76 288.1 273 83.9
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 1.8e-75 287.0 269 73.6
BcaB04g20064 Brassica carinata HOM05D005407 ORTHO05D006544 6.5e-73 278.5 269 74.7
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 1.4e-70 270.8 277 79.8
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 1.8e-70 270.4 270 79.6
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 3.4e-69 266.2 309 80.6
Aa31LG1G15900 Aethionema arabicum HOM05D005407 ORTHO05D006544 3.7e-44 183.0 243 54.7
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 3.7e-36 156.4 323 43.3
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 1.1e-19 101.7 207 39.6
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.5e-16 91.3 202 40.6
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.6e-16 89.4 202 39.6
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 7.3e-16 89.0 196 38.3
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.6e-15 87.8 202 39.1
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.1e-15 87.4 196 37.8
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.8e-15 87.0 198 37.9
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 6.2e-15 85.9 172 39.0
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 4.0e-14 83.2 299 30.1
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.2e-13 81.6 230 35.2
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 2.0e-13 80.9 139 42.4
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 2.0e-13 80.9 212 35.4
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 2.6e-13 80.5 208 36.1
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.4e-13 80.1 225 35.6
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 4.5e-13 79.7 198 33.8
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 4.5e-13 79.7 213 34.7
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 1.3e-12 78.2 211 32.2
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.3e-12 78.2 204 33.3
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 1.7e-12 77.8 172 37.2
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.7e-12 77.8 204 33.8
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 2.2e-12 77.4 208 32.7
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.8e-12 76.6 229 32.3
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.8e-12 76.6 329 29.5
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 4.9e-12 76.3 187 36.4
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 6.4e-12 75.9 211 34.1
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 1.1e-11 75.1 229 32.3
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.1e-11 75.1 229 32.3
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.1e-11 75.1 229 32.3
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 1.9e-11 74.3 204 34.3
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 2.4e-11 73.9 201 33.8
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.4e-11 73.9 329 28.0
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 2.4e-11 73.9 190 34.2
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 2.4e-11 73.9 220 34.5
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 2.4e-11 73.9 285 30.2
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 3.2e-11 73.6 199 34.2
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 4.2e-11 73.2 156 37.8
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 5.4e-11 72.8 176 35.8
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 1.6e-10 71.2 172 34.3
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 2.1e-10 70.9 209 31.6
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 2.7e-10 70.5 208 30.8
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 3.5e-10 70.1 196 34.2
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 7.9e-10 68.9 226 32.3
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 7.9e-10 68.9 285 29.8
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 1.0e-09 68.6 207 33.3
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 1.0e-09 68.6 190 34.2
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 3.0e-09 67.0 201 30.8
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 3.9e-09 66.6 208 33.2
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 3.9e-09 66.6 208 33.2
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 5.1e-09 66.2 200 33.5
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 5.1e-09 66.2 177 34.5
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 6.7e-09 65.9 203 33.5
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 8.7e-09 65.5 213 34.3
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 1.1e-08 65.1 202 31.7
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 2.5e-08 63.9 218 30.7
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 2.5e-08 63.9 194 30.4
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 3.3e-08 63.5 192 32.3
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 3.3e-08 63.5 187 34.8
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 4.3e-08 63.2 197 34.5
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 4.3e-08 63.2 216 31.5
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 4.3e-08 63.2 171 36.3
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 5.6e-08 62.8 181 31.5
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 5.6e-08 62.8 207 30.9
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 9.6e-08 62.0 187 32.6
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 9.6e-08 62.0 295 26.8
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 1.3e-07 61.6 211 33.2
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 1.3e-07 61.6 208 31.7
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.3e-07 61.6 199 30.7
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 1.6e-07 61.2 189 32.8
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 2.1e-07 60.8 179 33.0
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.8e-07 60.5 282 26.6
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 2.8e-07 60.5 208 31.2
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 3.7e-07 60.1 196 32.7
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 3.7e-07 60.1 175 31.4
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.7e-07 60.1 181 32.6
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 6.2e-07 59.3 193 31.1
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 8.1e-07 58.9 181 34.8
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 8.1e-07 58.9 96 40.6
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 1.1e-06 58.5 195 31.3
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 1.8e-06 57.8 209 32.5
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 3.1e-06 57.0 159 33.3
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 4.0e-06 56.6 200 29.5
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 6.9e-06 55.8 166 36.1


User provided reference genes

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