Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p15900 Brassica napus HOM05D000015 ORTHO05D028053 1.2e-42 176.0 83 100.0
C07p23200 Brassica napus HOM05D000015 ORTHO05D002445 2.7e-18 95.1 81 60.5
BolC7t42856H Brassica oleracea HOM05D000015 ORTHO05D002445 2.7e-18 95.1 81 60.5
BcaB07g32029 Brassica carinata HOM05D000015 ORTHO05D002445 1.6e-15 85.9 72 62.5
A06p16300 Brassica napus HOM05D000015 ORTHO05D002445 2.1e-15 85.5 72 61.1
BraA06t24732Z Brassica rapa HOM05D000015 ORTHO05D002445 2.1e-15 85.5 72 61.1
Thhalv10006877m.g Eutrema salsugineum HOM05D000015 ORTHO05D002445 2.1e-15 85.5 72 63.9
CARHR020670 Cardamine hirsuta HOM05D000015 ORTHO05D002445 3.6e-15 84.7 72 61.1
BcaC05g25918 Brassica carinata HOM05D000015 ORTHO05D002445 4.7e-15 84.3 72 61.1
C05p18680 Brassica napus HOM05D000015 ORTHO05D002445 4.7e-15 84.3 72 61.1
BolC5t30576H Brassica oleracea HOM05D000015 ORTHO05D002445 4.7e-15 84.3 72 61.1
Sp1g17940 Schrenkiella parvula HOM05D000015 ORTHO05D002445 4.7e-15 84.3 72 61.1
BraA06t24730Z Brassica rapa HOM05D000015 ORTHO05D028053 1.0e-14 83.2 72 59.7
AT1G20160 Arabidopsis thaliana HOM05D000015 ORTHO05D002445 1.8e-14 82.4 71 62.0
AL1G33000 Arabidopsis lyrata HOM05D000015 ORTHO05D002445 4.0e-14 81.3 72 58.3
Carub.0001s1970 Capsella rubella HOM05D000015 ORTHO05D002445 4.4e-13 77.8 66 60.6
THA.LOC104811432 Tarenaya hassleriana HOM05D000015 ORTHO05D002445 7.5e-13 77.0 72 52.8
A06p16280 Brassica napus HOM05D000015 ORTHO05D028053 9.1e-11 70.1 35 85.7
Aa31LG7G4570 Aethionema arabicum HOM05D000015 ORTHO05D002445 1.2e-10 69.7 72 54.2
Nn5g30800 Nelumbo nucifera HOM05D000015 ORTHO05D002445 2.2e-09 65.5 51 54.9
Cfa013987 Carpinus fangiana HOM05D000015 ORTHO05D002445 1.9e-08 62.4 75 44.0
CiPaw.07G145500 Carya illinoinensis HOM05D000015 ORTHO05D002445 1.9e-08 62.4 74 44.6
Gohir.D05G187400 Gossypium hirsutum HOM05D000015 ORTHO05D002445 2.5e-08 62.0 62 46.8
Gorai.009G192600 Gossypium raimondii HOM05D000015 ORTHO05D002445 2.5e-08 62.0 62 46.8
Haze_22675 Corylus avellana HOM05D000015 ORTHO05D002445 3.2e-08 61.6 75 42.7
Gohir.A05G184600 Gossypium hirsutum HOM05D000015 ORTHO05D002445 7.2e-08 60.5 62 45.2
GSVIVG01009968001 Vitis vinifera HOM05D000015 ORTHO05D002445 9.4e-08 60.1 44 59.1
Atru.chr13.245 Acer truncatum HOM05D000015 ORTHO05D002445 2.1e-07 58.9 44 61.4
Duzib093G2063 Durio zibethinus HOM05D000015 ORTHO05D002445 2.7e-07 58.5 62 41.9
Peaxi162Scf00672g00611 Petunia axillaris HOM05D000015 ORTHO05D002445 2.7e-07 58.5 49 53.1
Ciclev10000339m.g Citrus clementina HOM05D000015 ORTHO05D002445 4.7e-07 57.8 72 41.7
Actinidia15448 Actinidia chinensis HOM05D000015 ORTHO05D002445 6.1e-07 57.4 46 56.5
Cpa.g.sc26.288 Carica papaya HOM05D000015 ORTHO05D002445 6.1e-07 57.4 43 55.8
Thecc.08G048700 Theobroma cacao HOM05D000015 ORTHO05D002445 6.1e-07 57.4 72 38.9
TWI56G0522 Tripterygium wilfordii HOM05D000015 ORTHO05D002445 1.0e-06 56.6 69 40.6
CARHR020660 Cardamine hirsuta HOM05D000015 ORTHO05D002445 1.4e-06 56.2 44 56.8
TPR.G38086 Trifolium pratense HOM05D000015 ORTHO05D002445 1.4e-06 56.2 72 45.8
ClCG05G015540 Citrullus lanatus HOM05D000015 ORTHO05D002445 1.8e-06 55.8 44 59.1
COL.COLO4_26110 Corchorus olitorius HOM05D000015 ORTHO05D002445 1.8e-06 55.8 72 37.5
PGR083G2729 Punica granatum HOM05D000015 ORTHO05D002445 1.8e-06 55.8 65 46.2
TAR628G1197 Trochodendron aralioides HOM05D000015 ORTHO05D002445 1.8e-06 55.8 47 51.1
VMungo1309G2629 Vigna mungo HOM05D000015 ORTHO05D002445 1.8e-06 55.8 48 60.4
FAN15G2061 Fragaria x ananassa HOM05D000015 ORTHO05D002445 2.3e-06 55.5 44 54.5
FAN20G0064 Fragaria x ananassa HOM05D000015 ORTHO05D002445 2.3e-06 55.5 44 54.5
FAN27G2458 Fragaria x ananassa HOM05D000015 ORTHO05D002445 2.3e-06 55.5 44 54.5
QL02p012414 Quercus lobata HOM05D000015 ORTHO05D002445 2.3e-06 55.5 44 52.3
SGA_v2.0_scaffold145G36040 Striga asiatica HOM05D000015 ORTHO05D002445 2.3e-06 55.5 45 60.0
Lj4C20G5 Lonicera japonica HOM05D000015 ORTHO05D002445 3.0e-06 55.1 49 49.0
Lj1g0012160 Lotus japonicus HOM05D000015 ORTHO05D002445 3.0e-06 55.1 72 43.1
Gohir.A06G001800 Gossypium hirsutum HOM05D000015 ORTHO05D002445 4.0e-06 54.7 44 50.0
Gorai.010G002000 Gossypium raimondii HOM05D000015 ORTHO05D002445 4.0e-06 54.7 44 50.0
Medtr3g114420 Medicago truncatula HOM05D000015 ORTHO05D002445 4.0e-06 54.7 72 44.4
Potri.002G018600 Populus trichocarpa HOM05D000015 ORTHO05D002445 4.0e-06 54.7 44 54.5
Carub.0001s1969 Capsella rubella HOM05D000015 ORTHO05D002445 5.2e-06 54.3 44 52.3
Ca_15476_v3 Cicer arietinum L. HOM05D000015 ORTHO05D002445 5.2e-06 54.3 72 43.1
Nitab4.5_0008954g0040 Nicotiana tabacum HOM05D000015 ORTHO05D002445 5.2e-06 54.3 49 49.0
Peaxi162Scf00860g00429 Petunia axillaris HOM05D000015 ORTHO05D002445 5.2e-06 54.3 44 54.5
A07p15910 Brassica napus HOM05D000015 ORTHO05D002445 6.8e-06 53.9 44 56.8
BraA07t29321Z Brassica rapa HOM05D000015 ORTHO05D002445 6.8e-06 53.9 44 56.8
Medtr3g104930 Medicago truncatula HOM05D000015 ORTHO05D002445 6.8e-06 53.9 72 43.1
Nitab4.5_0000337g0020 Nicotiana tabacum HOM05D000015 ORTHO05D002445 6.8e-06 53.9 49 49.0
Sed0027143 Sechium edule HOM05D000015 ORTHO05D002445 6.8e-06 53.9 44 54.5
PGSC0003DMG400009947 Solanum tuberosum HOM05D000015 ORTHO05D002445 6.8e-06 53.9 70 41.4
TWI56G0067 Tripterygium wilfordii HOM05D000015 ORTHO05D002445 6.8e-06 53.9 41 58.5
VMungo1309G2142 Vigna mungo HOM05D000015 ORTHO05D002445 6.8e-06 53.9 44 61.4
AT1G20150 Arabidopsis thaliana HOM05D000015 ORTHO05D002445 8.8e-06 53.5 44 54.5
BcaNung03350 Brassica carinata HOM05D000015 ORTHO05D002445 8.8e-06 53.5 44 56.8
MELO3C000849.2 Cucumis melo HOM05D000015 ORTHO05D028053 8.8e-06 53.5 44 56.8
CsaV3_3G046020 Cucumis sativus L. HOM05D000015 ORTHO05D002445 8.8e-06 53.5 44 54.5
Medtr3g114400 Medicago truncatula HOM05D000015 ORTHO05D017204 8.8e-06 53.5 72 43.1
Prupe.1G361300 Prunus persica HOM05D000015 ORTHO05D002445 8.8e-06 53.5 43 55.8
SGA_v2.0_scaffold351G49657 Striga asiatica HOM05D000015 ORTHO05D002445 8.8e-06 53.5 66 43.9
SGA_v2.0_scaffold351G49664 Striga asiatica HOM05D000015 ORTHO05D002445 8.8e-06 53.5 44 56.8


User provided reference genes

Program Settings