Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p15660 Brassica napus HOM05D003234 ORTHO05D003635 4.0e-21 104.0 58 100.0
A07p15770 Brassica napus HOM05D003234 ORTHO05D003635 4.0e-21 104.0 58 100.0
Thhalv10009165m.g Eutrema salsugineum HOM05D003234 ORTHO05D003635 1.1e-10 69.3 46 84.8
Sp1g18170 Schrenkiella parvula HOM05D003234 ORTHO05D003635 1.1e-10 69.3 46 84.8
THA.LOC104813762 Tarenaya hassleriana HOM05D003234 ORTHO05D003635 1.1e-10 69.3 46 82.6
Aa31LG7G4760 Aethionema arabicum HOM05D003234 ORTHO05D003635 1.4e-10 68.9 46 82.6
AT1G20460 Arabidopsis thaliana HOM05D003234 ORTHO05D003635 1.4e-10 68.9 46 82.6
Carub.0001s1993 Capsella rubella HOM05D003234 ORTHO05D003635 1.4e-10 68.9 46 82.6
CARHR020910 Cardamine hirsuta HOM05D003234 ORTHO05D003635 1.4e-10 68.9 46 82.6
Thhalv10019348m.g Eutrema salsugineum HOM05D003234 ORTHO05D003635 2.4e-10 68.2 46 80.4
Sp5g31330 Schrenkiella parvula HOM05D003234 ORTHO05D003635 2.4e-10 68.2 46 80.4
BcaB07g32048 Brassica carinata HOM05D003234 ORTHO05D003635 5.4e-10 67.0 46 82.6
BcaC05g25956 Brassica carinata HOM05D003234 ORTHO05D003635 5.4e-10 67.0 46 82.6
A06p16500 Brassica napus HOM05D003234 ORTHO05D003635 5.4e-10 67.0 46 82.6
BNapus_Darmor_BZH_scaffold_170p00030 Brassica napus HOM05D003234 ORTHO05D003635 5.4e-10 67.0 46 82.6
C05p19050 Brassica napus HOM05D003234 ORTHO05D003635 5.4e-10 67.0 46 82.6
BraA06t24756Z Brassica rapa HOM05D003234 ORTHO05D003635 5.4e-10 67.0 46 82.6
ClCG00G002880 Citrullus lanatus HOM05D003234 ORTHO05D003635 1.2e-09 65.9 46 78.3
ClCG08G009600 Citrullus lanatus HOM05D003234 ORTHO05D003635 1.2e-09 65.9 46 78.3
Sabra05G0191800 Salix brachista HOM05D003234 ORTHO05D003635 1.2e-09 65.9 46 78.3
BcaB02g07054 Brassica carinata HOM05D003234 ORTHO05D003635 1.6e-09 65.5 46 76.1
BcaC08g47113 Brassica carinata HOM05D003234 ORTHO05D003635 1.6e-09 65.5 46 76.1
A02p20490 Brassica napus HOM05D003234 ORTHO05D003635 1.6e-09 65.5 46 76.1
BraA02t07080Z Brassica rapa HOM05D003234 ORTHO05D003635 1.6e-09 65.5 46 76.1
Cpa.g.sc26.223 Carica papaya HOM05D003234 ORTHO05D003635 2.1e-09 65.1 46 76.1
MELO3C026549.2 Cucumis melo HOM05D003234 ORTHO05D003635 2.1e-09 65.1 46 76.1
CsaV3_6G031700 Cucumis sativus L. HOM05D003234 ORTHO05D003635 2.1e-09 65.1 46 76.1
Potri.005G248300 Populus trichocarpa HOM05D003234 ORTHO05D003635 2.1e-09 65.1 46 76.1
QL02p013773 Quercus lobata HOM05D003234 ORTHO05D003635 2.1e-09 65.1 46 76.1
Actinidia15481 Actinidia chinensis HOM05D003234 ORTHO05D003635 2.7e-09 64.7 46 76.1
Carub.0002s2308 Capsella rubella HOM05D003234 ORTHO05D003635 2.7e-09 64.7 46 76.1
Duzib093G1967 Durio zibethinus HOM05D003234 ORTHO05D003635 2.7e-09 64.7 46 73.9
Gohir.A05G180900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.7e-09 64.7 46 73.9
Gohir.D05G183900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.7e-09 64.7 46 73.9
Gorai.009G189400 Gossypium raimondii HOM05D003234 ORTHO05D003635 2.7e-09 64.7 46 73.9
MD15G1003700 Malus domestica HOM05D003234 ORTHO05D003635 2.7e-09 64.7 46 73.9
Manes.18G007200 Manihot esculenta HOM05D003234 ORTHO05D003635 2.7e-09 64.7 46 73.9
BcaC03g15650 Brassica carinata HOM05D003234 ORTHO05D003635 3.5e-09 64.3 46 73.9
BraA07t31705Z Brassica rapa HOM05D003234 ORTHO05D003635 3.5e-09 64.3 46 76.1
Prupe.1G356200 Prunus persica HOM05D003234 ORTHO05D003635 3.5e-09 64.3 46 71.7
AT1G76185 Arabidopsis thaliana HOM05D003234 ORTHO05D003635 4.6e-09 63.9 46 76.1
Dinv31919 Davidia involucrata HOM05D003234 ORTHO05D003635 4.6e-09 63.9 46 73.9
Hma1.2p1_1260F.1_g271060 Hydrangea macrophylla HOM05D003234 ORTHO05D003635 4.6e-09 63.9 46 76.1
Sed0012631 Sechium edule HOM05D003234 ORTHO05D003635 4.6e-09 63.9 46 76.1
Lj1g0024220 Lotus japonicus HOM05D003234 ORTHO05D003635 6.0e-09 63.5 45 75.6
Medtr3g115080 Medicago truncatula HOM05D003234 ORTHO05D003635 6.0e-09 63.5 45 75.6
Potri.002G013000 Populus trichocarpa HOM05D003234 ORTHO05D003635 6.0e-09 63.5 46 73.9
Sed0016414 Sechium edule HOM05D003234 ORTHO05D003635 6.0e-09 63.5 46 76.1
MD08G1004300 Malus domestica HOM05D003234 ORTHO05D003635 7.8e-09 63.2 46 71.7
Thecc.08G055600 Theobroma cacao HOM05D003234 ORTHO05D003635 7.8e-09 63.2 46 71.7
FAN15G0717 Fragaria x ananassa HOM05D003234 ORTHO05D003635 1.0e-08 62.8 46 71.7
FAN20G3055 Fragaria x ananassa HOM05D003234 ORTHO05D003635 1.0e-08 62.8 46 71.7
RcHm_v2.0_Chr6g0304061 Rosa chinensis HOM05D003234 ORTHO05D003635 1.0e-08 62.8 46 71.7
CANSAT25G0014 Cannabis sativa HOM05D003234 ORTHO05D003635 1.3e-08 62.4 46 71.7
FAN27G0038 Fragaria x ananassa HOM05D003234 ORTHO05D003635 1.3e-08 62.4 46 69.6
Gohir.A02G083600 Gossypium hirsutum HOM05D003234 ORTHO05D003635 1.3e-08 62.4 46 71.7
Gohir.D02G099100 Gossypium hirsutum HOM05D003234 ORTHO05D003635 1.3e-08 62.4 46 71.7
Gorai.005G112900 Gossypium raimondii HOM05D003234 ORTHO05D003635 1.3e-08 62.4 46 71.7
PGR031G2527 Punica granatum HOM05D003234 ORTHO05D003635 1.3e-08 62.4 46 69.6
Actinidia37965 Actinidia chinensis HOM05D003234 ORTHO05D003635 1.7e-08 62.0 46 71.7
arahy.Tifrunner.gnm1.ann1.G2HAI2 Arachis hypogaea HOM05D003234 ORTHO05D003635 1.7e-08 62.0 45 73.3
C02p33350 Brassica napus HOM05D003234 ORTHO05D003635 1.7e-08 62.0 46 71.7
Nitab4.5_0002710g0120 Nicotiana tabacum HOM05D003234 ORTHO05D003635 1.7e-08 62.0 46 73.9
Phvul.009G021200 Phaseolus vulgaris HOM05D003234 ORTHO05D003635 1.7e-08 62.0 45 73.3
TWI12G0861 Tripterygium wilfordii HOM05D003234 ORTHO05D003635 1.7e-08 62.0 46 69.6
VMungo1309G2978 Vigna mungo HOM05D003234 ORTHO05D003635 1.7e-08 62.0 45 73.3
CAN.G208.7 Capsicum annuum HOM05D003234 ORTHO05D003635 2.3e-08 61.6 46 73.9
CiPaw.07G140700 Carya illinoinensis HOM05D003234 ORTHO05D003635 2.3e-08 61.6 46 69.6
Manes.05G140300 Manihot esculenta HOM05D003234 ORTHO05D003635 2.3e-08 61.6 46 71.7
Nitab4.5_0000699g0170 Nicotiana tabacum HOM05D003234 ORTHO05D003635 2.3e-08 61.6 46 73.9
Nitab4.5_0007869g0020 Nicotiana tabacum HOM05D003234 ORTHO05D003635 2.3e-08 61.6 46 73.9
Peaxi162Scf00064g01012 Petunia axillaris HOM05D003234 ORTHO05D003635 2.3e-08 61.6 46 73.9
Peaxi162Scf00400g00314 Petunia axillaris HOM05D003234 ORTHO05D003635 2.3e-08 61.6 46 71.7
TPR.G38123 Trifolium pratense HOM05D003234 ORTHO05D003635 2.3e-08 61.6 45 73.3
Duzib116G0672 Durio zibethinus HOM05D003234 ORTHO05D003635 3.0e-08 61.2 46 69.6
Eucgr.F03542 Eucalyptus grandis HOM05D003234 ORTHO05D003635 3.0e-08 61.2 46 67.4
FvH4_2g37670 Fragaria vesca HOM05D003234 ORTHO05D003635 3.0e-08 61.2 46 69.6
Glyma.04G019300 Glycine max HOM05D003234 ORTHO05D003635 3.0e-08 61.2 45 71.1
Glyma.06G019600 Glycine max HOM05D003234 ORTHO05D003635 3.0e-08 61.2 45 71.1
THA.LOC104809745 Tarenaya hassleriana HOM05D003234 ORTHO05D003635 3.0e-08 61.2 46 73.9
arahy.Tifrunner.gnm1.ann1.VFC9DI Arachis hypogaea HOM05D003234 ORTHO05D003635 3.9e-08 60.8 45 71.1
CSS0034652 Camellia sinensis var. sinensis HOM05D003234 ORTHO05D003635 3.9e-08 60.8 46 71.7
C06p32180 Brassica napus HOM05D003234 ORTHO05D003635 5.1e-08 60.5 46 71.7
Gohir.D05G256400 Gossypium hirsutum HOM05D003234 ORTHO05D003635 5.1e-08 60.5 46 71.7
Gorai.009G267900 Gossypium raimondii HOM05D003234 ORTHO05D003635 5.1e-08 60.5 46 71.7
BraA07t30501Z Brassica rapa HOM05D003234 ORTHO05D003635 6.6e-08 60.1 46 71.7
Cc10_g00860 Coffea canephora HOM05D003234 ORTHO05D003635 6.6e-08 60.1 46 69.6
Nitab4.5_0000337g0170 Nicotiana tabacum HOM05D003234 ORTHO05D003635 6.6e-08 60.1 46 71.7
Solyc12g094510.2 Solanum lycopersicum HOM05D003234 ORTHO05D003635 6.6e-08 60.1 46 71.7
Sopen12g031400 Solanum pennellii HOM05D003234 ORTHO05D003635 6.6e-08 60.1 46 71.7
vmacro21831 Vaccinium macrocarpon HOM05D003234 ORTHO05D003635 6.6e-08 60.1 46 71.7
A07p28600 Brassica napus HOM05D003234 ORTHO05D003635 8.6e-08 59.7 46 71.7
Lalb_Chr19g0131711 Lupinus albus HOM05D003234 ORTHO05D003635 8.6e-08 59.7 46 67.4
Nn6g31830 Nelumbo nucifera HOM05D003234 ORTHO05D003635 8.6e-08 59.7 46 67.4
Sc02g0009000 Simmondsia chinensis HOM05D003234 ORTHO05D003635 8.6e-08 59.7 46 63.0
Duzib041G0372 Durio zibethinus HOM05D003234 ORTHO05D003635 1.1e-07 59.3 46 67.4
Gohir.A05G254800 Gossypium hirsutum HOM05D003234 ORTHO05D003635 1.1e-07 59.3 46 69.6
Rhsim06G0008900 Rhododendron simsii HOM05D003234 ORTHO05D003635 1.1e-07 59.3 46 69.6
Hund05127 Selenicereus undatus HOM05D003234 ORTHO05D003635 1.5e-07 58.9 46 69.6
PGSC0003DMG400029411 Solanum tuberosum HOM05D003234 ORTHO05D003635 1.5e-07 58.9 46 69.6
CiPaw.08G071600 Carya illinoinensis HOM05D003234 ORTHO05D003635 1.9e-07 58.5 46 65.2
Sabra02G0010200 Salix brachista HOM05D003234 ORTHO05D003635 1.9e-07 58.5 46 67.4
EL10Ac1g02011 Beta vulgaris HOM05D003234 ORTHO05D003635 2.5e-07 58.2 45 68.9
Lalb_Chr11g0061721 Lupinus albus HOM05D003234 ORTHO05D003635 2.5e-07 58.2 58 63.8
Psat0s3811g0040 Pisum sativum HOM05D003234 ORTHO05D003635 3.3e-07 57.8 45 71.1
MSTRG.22360 Avicennia marina HOM05D003234 ORTHO05D003635 4.3e-07 57.4 46 71.7
Ciclev10002915m.g Citrus clementina HOM05D003234 ORTHO05D003635 4.3e-07 57.4 46 69.6
unitig_21.g20148 Utricularia gibba HOM05D003234 ORTHO05D003635 5.6e-07 57.0 46 69.6
GSVIVG01008697001 Vitis vinifera HOM05D003234 ORTHO05D003635 7.3e-07 56.6 46 67.4
Oeu011320.1 Olea europaea HOM05D003234 ORTHO05D003635 1.6e-06 55.5 46 67.4
SHI08007 Sapria himalayana HOM05D003234 ORTHO05D003635 1.6e-06 55.5 46 65.2
Lalb_Chr01g0008381 Lupinus albus HOM05D003234 ORTHO05D003635 2.1e-06 55.1 45 66.7
Migut.C00924 Erythranthe guttata HOM05D003234 ORTHO05D003635 6.2e-06 53.5 46 63.0
unitig_744.g24608 Utricularia gibba HOM05D003234 ORTHO05D003635 6.2e-06 53.5 45 66.7
MSTRG.25294 Avicennia marina HOM05D003234 ORTHO05D003635 8.1e-06 53.1 46 60.9
Nitab4.5_0000588g0270 Nicotiana tabacum HOM05D003234 ORTHO05D003635 8.1e-06 53.1 46 65.2
SGA_v2.0_scaffold19G08601 Striga asiatica HOM05D003234 ORTHO05D003635 8.1e-06 53.1 46 65.2


User provided reference genes

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