Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p15650 Brassica napus HOM05D000695 ORTHO05D010505 1.8e-64 249.2 139 100.0
A07p15760 Brassica napus HOM05D000695 ORTHO05D010505 5.0e-54 214.5 153 83.7
BraA07t29303Z Brassica rapa HOM05D000695 ORTHO05D010505 9.5e-53 210.3 153 83.0
BcaNung03385 Brassica carinata HOM05D000695 ORTHO05D010505 5.7e-50 201.1 153 75.8
C07p22990 Brassica napus HOM05D000695 ORTHO05D010505 5.7e-50 201.1 153 75.8
BolC7t42839H Brassica oleracea HOM05D000695 ORTHO05D010505 5.7e-50 201.1 153 76.5
BcaB03g14318 Brassica carinata HOM05D000695 ORTHO05D010505 1.3e-49 199.9 153 69.9
Sp1g18180 Schrenkiella parvula HOM05D000695 ORTHO05D010505 4.6e-47 191.4 154 67.5
Thhalv10009034m.g Eutrema salsugineum HOM05D000695 ORTHO05D010505 2.8e-44 182.2 153 69.3
AL1G33400 Arabidopsis lyrata HOM05D000695 ORTHO05D010505 2.5e-37 159.1 153 58.2
AT1G20470 Arabidopsis thaliana HOM05D000695 ORTHO05D010505 2.5e-37 159.1 153 58.2
BraA06t24757Z Brassica rapa HOM05D000695 ORTHO05D010505 4.7e-36 154.8 153 58.2
Carub.0001s1994 Capsella rubella HOM05D000695 ORTHO05D010505 6.2e-36 154.5 153 58.2
A06p16510 Brassica napus HOM05D000695 ORTHO05D010505 1.4e-35 153.3 153 57.5
CARHR020920 Cardamine hirsuta HOM05D000695 ORTHO05D010505 5.2e-35 151.4 154 63.6
Aa31LG7G4780 Aethionema arabicum HOM05D000695 ORTHO05D010505 4.9e-33 144.8 151 59.6
BcaB07g32049 Brassica carinata HOM05D000695 ORTHO05D010505 4.9e-33 144.8 151 65.6
BcaC05g25957 Brassica carinata HOM05D000695 ORTHO05D010505 2.1e-31 139.4 153 64.7
C05p19060 Brassica napus HOM05D000695 ORTHO05D010505 2.1e-31 139.4 153 64.7
BolC5t30607H Brassica oleracea HOM05D000695 ORTHO05D010505 2.1e-31 139.4 153 64.7
BNapus_Darmor_BZH_scaffold_170p00040 Brassica napus HOM05D000695 ORTHO05D010505 3.3e-21 105.5 100 75.0
C06p50140 Brassica napus HOM05D000695 ORTHO05D010505 1.4e-16 90.1 151 38.4
BolC6t40054H Brassica oleracea HOM05D000695 ORTHO05D010505 1.4e-16 90.1 151 38.4
Carub.0002s2309 Capsella rubella HOM05D000695 ORTHO05D010505 3.2e-16 89.0 137 42.3
THA.LOC104809735 Tarenaya hassleriana HOM05D000695 ORTHO05D010505 4.2e-16 88.6 138 47.1
AT1G76190 Arabidopsis thaliana HOM05D000695 ORTHO05D010505 5.4e-16 88.2 151 39.7
A07p41760 Brassica napus HOM05D000695 ORTHO05D010505 9.3e-16 87.4 137 40.1
AL2G36260 Arabidopsis lyrata HOM05D000695 ORTHO05D010505 1.6e-15 86.7 151 40.4
BraA07t31706Z Brassica rapa HOM05D000695 ORTHO05D010505 1.6e-15 86.7 137 40.1
BcaC08g47282 Brassica carinata HOM05D000695 ORTHO05D010505 2.7e-15 85.9 143 37.8
CARHR069750 Cardamine hirsuta HOM05D000695 ORTHO05D010505 6.0e-15 84.7 151 40.4
Sp5g31340 Schrenkiella parvula HOM05D000695 ORTHO05D010505 7.8e-15 84.3 137 40.9
BcaC08g47114 Brassica carinata HOM05D000695 ORTHO05D010505 1.9e-13 79.7 137 42.3
COL.COLO4_21604 Corchorus olitorius HOM05D000695 ORTHO05D010505 1.8e-11 73.2 143 35.7
Nn5g30905 Nelumbo nucifera HOM05D000695 ORTHO05D010505 5.8e-10 68.2 137 35.8
Duzib093G0706 Durio zibethinus HOM05D000695 ORTHO05D010505 7.6e-10 67.8 151 35.8
Cfa014049 Carpinus fangiana HOM05D000695 ORTHO05D010505 9.9e-10 67.4 76 50.0
Haze_22747 Corylus avellana HOM05D000695 ORTHO05D010505 2.2e-09 66.2 76 48.7
Cfa014046 Carpinus fangiana HOM05D000695 ORTHO05D010505 4.9e-09 65.1 76 48.7
TAR628G1019 Trochodendron aralioides HOM05D000695 ORTHO05D010505 8.4e-09 64.3 75 45.3
PSO541G0512 Papaver somniferum HOM05D000695 ORTHO05D010505 1.1e-08 63.9 75 49.3
Atru.chr13.165 Acer truncatum HOM05D000695 ORTHO05D010505 1.4e-08 63.5 140 35.7
Solyc04g082230.1 Solanum lycopersicum HOM05D000695 ORTHO05D010505 2.4e-08 62.8 79 44.3
Thecc.08G055900 Theobroma cacao HOM05D000695 ORTHO05D010505 2.4e-08 62.8 78 44.9
TWI56G0454 Tripterygium wilfordii HOM05D000695 ORTHO05D010505 4.2e-08 62.0 89 41.6
Aqoxy6G01825 Aquilegia oxysepala HOM05D000695 ORTHO05D010505 5.4e-08 61.6 78 43.6
PGSC0003DMG400009897 Solanum tuberosum HOM05D000243 ORTHO05D010505 5.4e-08 61.6 79 43.0
PSO675G6403 Papaver somniferum HOM05D000695 ORTHO05D010505 3.5e-07 58.9 75 45.3
Cpa.g.sc26.221 Carica papaya HOM05D000695 ORTHO05D010505 4.6e-07 58.5 147 34.0
BcaB06g29138 Brassica carinata HOM05D000695 ORTHO05D010505 7.9e-07 57.8 63 52.4
BcaC02g07362 Brassica carinata HOM05D000695 ORTHO05D010505 7.9e-07 57.8 63 52.4
BcaC08g43828 Brassica carinata HOM05D000695 ORTHO05D010505 1.3e-06 57.0 63 52.4
Manes.05G136200 Manihot esculenta HOM05D000695 ORTHO05D010505 1.7e-06 56.6 75 42.7
Manes.18G006885 Manihot esculenta HOM05D000695 ORTHO05D010505 2.3e-06 56.2 75 41.3
MBI08_g37911_MAGBIO Magnolia biondii HOM05D000695 ORTHO05D000615 3.9e-06 55.5 83 39.8
Peaxi162Scf01481g00011 Petunia axillaris HOM05D000695 ORTHO05D010505 5.1e-06 55.1 79 40.5
HPP92_026894 Vanilla planifolia HOM05D000695 ORTHO05D010505 6.6e-06 54.7 39 56.4


User provided reference genes

Program Settings