Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p15090 Brassica napus HOM05D008816 ORTHO05D011113 1.4e-28 129.0 70 100.0
BraA07t29250Z Brassica rapa HOM05D008816 ORTHO05D011113 1.4e-28 129.0 70 100.0
BcaB03g14265 Brassica carinata HOM05D008816 ORTHO05D011113 1.7e-26 122.1 70 92.9
BcaC06g34859 Brassica carinata HOM05D008816 ORTHO05D011113 3.0e-23 111.3 70 90.0
C07p22160 Brassica napus HOM05D008816 ORTHO05D011113 3.0e-23 111.3 70 90.0
BolC7t42783H Brassica oleracea HOM05D008816 ORTHO05D011113 3.0e-23 111.3 70 90.0
A06p17570 Brassica napus HOM05D008816 ORTHO05D011113 1.7e-18 95.5 73 75.3
BraA06t24852Z Brassica rapa HOM05D008816 ORTHO05D011113 1.7e-18 95.5 73 75.3
BcaB05g22551 Brassica carinata HOM05D008816 ORTHO05D011113 6.5e-18 93.6 71 78.9
Sp1g19060 Schrenkiella parvula HOM05D008816 ORTHO05D011113 1.1e-17 92.8 71 73.2
Sp1g19050 Schrenkiella parvula HOM05D008816 ORTHO05D011113 1.9e-17 92.0 76 75.0
BcaB07g32149 Brassica carinata HOM05D008816 ORTHO05D011113 2.5e-17 91.7 71 77.5
AL1G34670 Arabidopsis lyrata HOM05D008816 ORTHO05D011113 3.6e-16 87.8 67 73.1
AL1G34680 Arabidopsis lyrata HOM05D008816 ORTHO05D011113 6.1e-16 87.0 68 73.5
Carub.0001s2095 Capsella rubella HOM05D008816 ORTHO05D011113 8.0e-16 86.7 67 71.6
BraA08t34824Z Brassica rapa HOM05D008816 ORTHO05D011113 1.8e-15 85.5 71 66.2
BraA08t34825Z Brassica rapa HOM05D008816 ORTHO05D011113 3.0e-15 84.7 71 66.2
BcaC05g26063 Brassica carinata HOM05D008816 ORTHO05D032745 3.9e-15 84.3 61 78.7
C05p20460 Brassica napus HOM05D008816 ORTHO05D032745 3.9e-15 84.3 61 78.7
C08p20900 Brassica napus HOM05D008816 ORTHO05D011113 5.2e-15 84.0 71 64.8
BolC8t49728H Brassica oleracea HOM05D008816 ORTHO05D011113 5.2e-15 84.0 71 64.8
BcaB03g12813 Brassica carinata HOM05D008816 ORTHO05D011113 6.7e-15 83.6 71 64.8
BcaC07g39105 Brassica carinata HOM05D008816 ORTHO05D011113 1.5e-14 82.4 71 64.8
BraA07t29249Z Brassica rapa HOM05D008816 ORTHO05D011113 2.0e-14 82.0 68 66.2
BolC5t30739H Brassica oleracea HOM05D008816 ORTHO05D032745 4.4e-14 80.9 61 77.0
CARHR021890 Cardamine hirsuta HOM05D008816 ORTHO05D011113 9.7e-14 79.7 70 68.6
C07p22060 Brassica napus HOM05D008816 ORTHO05D011113 1.3e-13 79.3 71 66.2
A06p17580 Brassica napus HOM05D008816 ORTHO05D011113 1.7e-13 79.0 68 66.2
BraA06t24853Z Brassica rapa HOM05D008816 ORTHO05D011113 1.7e-13 79.0 68 66.2
A07p15070 Brassica napus HOM05D008816 ORTHO05D011113 2.2e-13 78.6 68 64.7
C08p20880 Brassica napus HOM05D008816 ORTHO05D011113 2.2e-13 78.6 71 64.8
BolC8t49726H Brassica oleracea HOM05D008816 ORTHO05D011113 2.2e-13 78.6 71 64.8
BcaC05g26064 Brassica carinata HOM05D008816 ORTHO05D011113 2.8e-13 78.2 68 66.2
C05p20480 Brassica napus HOM05D008816 ORTHO05D011113 2.8e-13 78.2 68 66.2
BolC5t30746H Brassica oleracea HOM05D008816 ORTHO05D011113 2.8e-13 78.2 68 66.2
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 4.8e-13 77.4 66 66.7
BcaB07g32150 Brassica carinata HOM05D008816 ORTHO05D011113 1.4e-12 75.9 68 64.7
BcaC06g34895 Brassica carinata HOM05D008816 ORTHO05D011113 2.4e-12 75.1 71 63.4
BolC7t42736H Brassica oleracea HOM05D008816 ORTHO05D011113 2.4e-12 75.1 71 63.4
BcaB03g14263 Brassica carinata HOM05D008816 ORTHO05D011113 3.5e-11 71.2 71 62.0
Carub.0001s2096 Capsella rubella HOM05D008816 ORTHO05D011113 5.9e-11 70.5 73 65.8
BcaB05g22554 Brassica carinata HOM05D008816 ORTHO05D011113 4.2e-09 64.3 50 70.0
Carub.0001s2094 Capsella rubella HOM05D011463 ORTHO05D013454 9.7e-06 53.1 64 51.6


User provided reference genes

Program Settings