Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p14460 Brassica napus HOM05D000425 ORTHO05D033483 3.6e-17 90.5 46 100.0
A05p39100 Brassica napus HOM05D000425 ORTHO05D033483 2.0e-15 84.7 42 100.0
BcaB02g09142 Brassica carinata HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
BcaC02g12041 Brassica carinata HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
A05p07170 Brassica napus HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
C04p08580 Brassica napus HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
BolC4t22453H Brassica oleracea HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
BraA05t19682Z Brassica rapa HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
Carub.0004s2118 Capsella rubella HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
Thhalv10016467m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
Sp4g21480 Schrenkiella parvula HOM05D000425 ORTHO05D000373 4.3e-10 67.0 44 75.0
AL4G36430 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 72.7
AT2G39130 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 72.7
BcaC02g12909 Brassica carinata HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 75.0
BcaC02g12911 Brassica carinata HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 75.0
BcaC02g12912 Brassica carinata HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 75.0
A04p29800 Brassica napus HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 75.0
C04p67060 Brassica napus HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 75.0
BolC4t28208H Brassica oleracea HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 75.0
BraA04t18442Z Brassica rapa HOM05D000425 ORTHO05D000373 5.6e-10 66.6 44 75.0
CARHR133890 Cardamine hirsuta HOM05D000425 ORTHO05D000373 3.6e-09 63.9 44 68.2
Aa31LG5G20470 Aethionema arabicum HOM05D000425 ORTHO05D000373 8.1e-09 62.8 43 72.1
Lalb_Chr21g0313741 Lupinus albus HOM05D000425 ORTHO05D000373 6.8e-08 59.7 44 68.2
TPR.G1950 Trifolium pratense HOM05D000425 ORTHO05D000373 6.8e-08 59.7 44 68.2
ECA238G4802 Erigeron canadensis HOM05D000425 ORTHO05D000373 8.9e-08 59.3 44 63.6
HanXRQChr14g0456651 Helianthus annuus HOM05D000425 ORTHO05D000373 8.9e-08 59.3 44 63.6
THA.LOC104825222 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 8.9e-08 59.3 44 61.4
Lsat_1_v5_gn_2_112901 Lactuca sativa HOM05D000425 ORTHO05D000373 1.2e-07 58.9 41 68.3
TAR633G2021 Trochodendron aralioides HOM05D000425 ORTHO05D000373 1.5e-07 58.5 41 70.7
Solyc03g063030.4 Solanum lycopersicum HOM05D000425 ORTHO05D000373 2.6e-07 57.8 40 67.5
Sopen03g015310 Solanum pennellii HOM05D000425 ORTHO05D000373 2.6e-07 57.8 40 67.5
PGSC0003DMG400007424 Solanum tuberosum HOM05D000425 ORTHO05D000373 2.6e-07 57.8 40 67.5
PGSC0003DMG400013962 Solanum tuberosum HOM05D000425 ORTHO05D000373 2.6e-07 57.8 40 67.5
Actinidia06740 Actinidia chinensis HOM05D000425 ORTHO05D000373 3.4e-07 57.4 44 63.6
CAN.G321.40 Capsicum annuum HOM05D000425 ORTHO05D000373 3.4e-07 57.4 40 67.5
Haze_16848 Corylus avellana HOM05D000425 ORTHO05D000373 3.4e-07 57.4 40 70.0
FvH4_7g18870 Fragaria vesca HOM05D000425 ORTHO05D000373 3.4e-07 57.4 41 63.4
Nitab4.5_0004325g0070 Nicotiana tabacum HOM05D000425 ORTHO05D000373 3.4e-07 57.4 40 67.5
Nitab4.5_0004385g0030 Nicotiana tabacum HOM05D000425 ORTHO05D000373 3.4e-07 57.4 40 67.5
Solyc03g063050.1 Solanum lycopersicum HOM05D000425 ORTHO05D033483 3.4e-07 57.4 43 62.8
Solyc11g008440.3 Solanum lycopersicum HOM05D000425 ORTHO05D000373 3.4e-07 57.4 40 67.5
Sopen11g004230 Solanum pennellii HOM05D000425 ORTHO05D000373 3.4e-07 57.4 40 67.5
FAN10G2300 Fragaria x ananassa HOM05D000425 ORTHO05D000373 4.4e-07 57.0 41 63.4
Psat6g181960 Pisum sativum HOM05D000425 ORTHO05D000373 4.4e-07 57.0 41 68.3
GSVIVG01016234001 Vitis vinifera HOM05D000425 ORTHO05D000373 4.4e-07 57.0 44 65.9
Ca_10549_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 5.8e-07 56.6 40 70.0
DCAR_019090 Daucus carota HOM05D000425 ORTHO05D000373 5.8e-07 56.6 43 62.8
HanXRQChr07g0195041 Helianthus annuus HOM05D000425 ORTHO05D000373 5.8e-07 56.6 44 61.4
Lalb_Chr02g0152151 Lupinus albus HOM05D000425 ORTHO05D000373 5.8e-07 56.6 44 63.6
Peaxi162Scf00662g00415 Petunia axillaris HOM05D000425 ORTHO05D000373 5.8e-07 56.6 40 67.5
Lj5g0024381 Lotus japonicus HOM05D000425 ORTHO05D000373 7.6e-07 56.2 41 65.9
Lalb_Chr03g0036431 Lupinus albus HOM05D000425 ORTHO05D000373 7.6e-07 56.2 44 63.6
RcHm_v2.0_Chr1g0362811 Rosa chinensis HOM05D000425 ORTHO05D000373 7.6e-07 56.2 41 63.4
Migut.F01722 Erythranthe guttata HOM05D000425 ORTHO05D000373 9.9e-07 55.8 41 63.4
FAN06G2715 Fragaria x ananassa HOM05D000425 ORTHO05D000373 9.9e-07 55.8 41 63.4
HanXRQChr01g0023291 Helianthus annuus HOM05D000425 ORTHO05D000373 9.9e-07 55.8 40 65.0
Hma1.2p1_0438F.1_g153100 Hydrangea macrophylla HOM05D000425 ORTHO05D000373 9.9e-07 55.8 41 65.9
Medtr1g094620 Medicago truncatula HOM05D000425 ORTHO05D000373 9.9e-07 55.8 41 65.9
Peaxi162Scf00253g00417 Petunia axillaris HOM05D000425 ORTHO05D000373 9.9e-07 55.8 43 62.8
PGR044G0567 Punica granatum HOM05D000425 ORTHO05D000373 9.9e-07 55.8 41 63.4
Actinidia32438 Actinidia chinensis HOM05D000425 ORTHO05D000373 1.3e-06 55.5 41 65.9
Thhalv10010278m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 1.3e-06 55.5 44 59.1
Aqoxy1G01173_Aqoxy1G01174 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 1.7e-06 55.1 41 63.4
arahy.Tifrunner.gnm1.ann1.BC87BJ Arachis hypogaea HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 59.1
arahy.Tifrunner.gnm1.ann1.N0MV1J Arachis hypogaea HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 59.1
BcaC07g39779 Brassica carinata HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 59.1
A09p47760 Brassica napus HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 59.1
C08p29990 Brassica napus HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 59.1
BolC8t50608H Brassica oleracea HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 59.1
BraA09t40234Z Brassica rapa HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 59.1
CARHR164780 Cardamine hirsuta HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 59.1
FAN06G3886 Fragaria x ananassa HOM05D000425 ORTHO05D000373 1.7e-06 55.1 41 63.4
Glyma.02G160900 Glycine max HOM05D000425 ORTHO05D000373 1.7e-06 55.1 44 61.4
Manes.07G095400 Manihot esculenta HOM05D000425 ORTHO05D000373 1.7e-06 55.1 41 63.4
Nitab4.5_0000819g0070 Nicotiana tabacum HOM05D000425 ORTHO05D000373 1.7e-06 55.1 40 67.5
Nitab4.5_0002233g0010 Nicotiana tabacum HOM05D000425 ORTHO05D000373 1.7e-06 55.1 40 67.5
Oeu000807.1 Olea europaea HOM05D000425 ORTHO05D000373 1.7e-06 55.1 40 67.5
Phvul.007G097200 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 1.7e-06 55.1 43 58.1
TWI38G1268 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 1.7e-06 55.1 41 65.9
VMungo0720G3028 Vigna mungo HOM05D000425 ORTHO05D000373 1.7e-06 55.1 43 58.1
Glyma.10G109500 Glycine max HOM05D000425 ORTHO05D000373 2.2e-06 54.7 44 59.1
Glyma.10G208800 Glycine max HOM05D000425 ORTHO05D000373 2.2e-06 54.7 44 61.4
Glyma.20G181900 Glycine max HOM05D000425 ORTHO05D000373 2.2e-06 54.7 44 61.4
Lj3A881T67 Lonicera japonica HOM05D000425 ORTHO05D000373 2.2e-06 54.7 40 65.0
Potri.008G036300 Populus trichocarpa HOM05D000425 ORTHO05D000373 2.2e-06 54.7 44 59.1
unitig_37.g12314 Utricularia gibba HOM05D000425 ORTHO05D000373 2.2e-06 54.7 44 61.4
vmacro07124 Vaccinium macrocarpon HOM05D000425 ORTHO05D000373 2.2e-06 54.7 41 63.4
VMungo0720G0628 Vigna mungo HOM05D000425 ORTHO05D000373 2.2e-06 54.7 41 65.9
DCAR_006422 Daucus carota HOM05D001165 ORTHO05D001347 2.9e-06 54.3 41 61.0
ECA233G4436 Erigeron canadensis HOM05D000425 ORTHO05D000373 2.9e-06 54.3 42 57.1
Lj2A18T49 Lonicera japonica HOM05D000425 ORTHO05D000373 2.9e-06 54.3 40 62.5
Lalb_Chr19g0129131 Lupinus albus HOM05D000425 ORTHO05D000373 2.9e-06 54.3 43 60.5
QL08p054920 Quercus lobata HOM05D000425 ORTHO05D000373 2.9e-06 54.3 40 67.5
Rhsim03G0117100 Rhododendron simsii HOM05D000425 ORTHO05D000373 2.9e-06 54.3 41 61.0
Sp5g07590 Schrenkiella parvula HOM05D000425 ORTHO05D000373 2.9e-06 54.3 44 59.1
Aa31sc66G20 Aethionema arabicum HOM05D000425 ORTHO05D000373 3.8e-06 53.9 40 57.5
AT3G54830 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 3.8e-06 53.9 44 56.8
CSS0006346 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 3.8e-06 53.9 41 65.9
Phvul.007G242400 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 3.8e-06 53.9 44 61.4
MSTRG.384 Avicennia marina HOM05D000425 ORTHO05D000373 4.9e-06 53.5 41 61.0
BcaB01g00156 Brassica carinata HOM05D000425 ORTHO05D000373 4.9e-06 53.5 44 56.8
MD01G1104600 Malus domestica HOM05D000425 ORTHO05D000373 4.9e-06 53.5 43 58.1
PSO063G3625 Papaver somniferum HOM05D000425 ORTHO05D000373 4.9e-06 53.5 43 60.5
PSO339G4452 Papaver somniferum HOM05D000425 ORTHO05D000373 4.9e-06 53.5 43 60.5
HPP92_022587 Vanilla planifolia HOM05D000425 ORTHO05D000373 4.9e-06 53.5 41 58.5
Ca_20268_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 6.4e-06 53.1 41 63.4
ECA233G4557 Erigeron canadensis HOM05D000425 ORTHO05D000373 6.4e-06 53.1 44 61.4
Manes.10G049300 Manihot esculenta HOM05D000425 ORTHO05D000373 6.4e-06 53.1 41 61.0
Psat6g093880 Pisum sativum HOM05D000425 ORTHO05D000373 6.4e-06 53.1 41 63.4
Ca_24104_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 8.4e-06 52.8 41 63.4
HanXRQChr08g0218631 Helianthus annuus HOM05D000425 ORTHO05D000373 8.4e-06 52.8 43 55.8
PGR142G2295 Punica granatum HOM05D000425 ORTHO05D000373 8.4e-06 52.8 40 65.0
SalBow4G1724 Salvia bowleyana HOM05D000425 ORTHO05D000373 8.4e-06 52.8 44 56.8
SalBow4G1926 Salvia bowleyana HOM05D000425 ORTHO05D000373 8.4e-06 52.8 44 56.8
Sp3g07720 Schrenkiella parvula HOM05D000425 ORTHO05D000373 8.4e-06 52.8 44 59.1


User provided reference genes

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