Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p14330 Brassica napus HOM05D004571 ORTHO05D005334 1.0e-48 196.4 101 100.0
BraA07t29189Z Brassica rapa HOM05D004571 ORTHO05D005334 7.6e-44 180.3 90 100.0
BcaB03g14198 Brassica carinata HOM05D004571 ORTHO05D005334 1.3e-30 136.3 96 77.1
Sp1g20030 Schrenkiella parvula HOM05D004571 ORTHO05D005334 6.9e-29 130.6 98 75.5
Thhalv10009192m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 1.2e-28 129.8 98 74.5
C07p21100 Brassica napus HOM05D004571 ORTHO05D005334 1.9e-26 122.5 124 58.1
BcaC07g39167 Brassica carinata HOM05D004571 ORTHO05D005334 5.5e-26 120.9 101 67.3
CARHR022880 Cardamine hirsuta HOM05D004571 ORTHO05D005334 5.5e-26 120.9 103 68.9
AT1G22520 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 7.2e-26 120.6 97 70.1
BcaB03g11911 Brassica carinata HOM05D004571 ORTHO05D005334 4.6e-25 117.9 100 68.0
C08p21600 Brassica napus HOM05D004571 ORTHO05D005334 7.9e-25 117.1 93 66.7
Carub.0001s2205 Capsella rubella HOM05D004571 ORTHO05D005334 1.0e-24 116.7 99 69.7
AL1G36060 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 1.4e-24 116.3 97 68.0
BraA08t34777Z Brassica rapa HOM05D004571 ORTHO05D005334 1.4e-24 116.3 91 70.3
BolC8t49798H Brassica oleracea HOM05D004571 ORTHO05D005334 2.3e-24 115.5 91 71.4
A08p28490 Brassica napus HOM05D004571 ORTHO05D005334 1.5e-23 112.8 78 74.4
Sp5g27250 Schrenkiella parvula HOM05D004571 ORTHO05D005334 4.3e-23 111.3 94 67.0
AL2G31830 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 2.8e-22 108.6 91 65.9
BcaB03g14960 Brassica carinata HOM05D004571 ORTHO05D005334 2.8e-22 108.6 89 70.8
AT1G72170 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 6.3e-22 107.5 101 64.4
A07p30330 Brassica napus HOM05D004571 ORTHO05D005334 1.8e-21 105.9 87 66.7
C06p35100 Brassica napus HOM05D004571 ORTHO05D005334 1.8e-21 105.9 91 65.9
Aa31LG7G6430 Aethionema arabicum HOM05D004571 ORTHO05D005334 2.4e-21 105.5 99 64.6
THA.LOC104800135 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 2.4e-21 105.5 81 67.9
Aa31LG4G8400 Aethionema arabicum HOM05D004571 ORTHO05D005334 4.1e-21 104.8 80 70.0
C06p46340 Brassica napus HOM05D004571 ORTHO05D005334 4.1e-21 104.8 82 65.9
BolC6t39679H Brassica oleracea HOM05D004571 ORTHO05D005334 4.1e-21 104.8 82 65.9
CARHR065020 Cardamine hirsuta HOM05D004571 ORTHO05D005334 4.1e-21 104.8 89 65.2
BraA07t30670Z Brassica rapa HOM05D004571 ORTHO05D005334 5.3e-21 104.4 74 71.6
BraA07t31392Z Brassica rapa HOM05D004571 ORTHO05D005334 6.9e-21 104.0 82 64.6
BolC6t38614H Brassica oleracea HOM05D004571 ORTHO05D005334 9.1e-21 103.6 91 64.8
Carub.0002s1897 Capsella rubella HOM05D004571 ORTHO05D005334 9.1e-21 103.6 90 65.6
A07p38280 Brassica napus HOM05D004571 ORTHO05D005334 1.2e-20 103.2 82 64.6
Ciclev10002721m.g Citrus clementina HOM05D004571 ORTHO05D005334 2.6e-20 102.1 77 68.8
Thecc.08G192400 Theobroma cacao HOM05D004571 ORTHO05D005334 4.5e-20 101.3 70 68.6
CiPaw.07G235800 Carya illinoinensis HOM05D004571 ORTHO05D005334 2.9e-19 98.6 77 63.6
COL.COLO4_24652 Corchorus olitorius HOM05D004571 ORTHO05D005334 5.0e-19 97.8 74 66.2
Cpa.g.sc66.1 Carica papaya HOM05D004571 ORTHO05D005334 8.5e-19 97.1 64 70.3
THA.LOC104809727 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 8.5e-19 97.1 89 60.7
Haze_21312 Corylus avellana HOM05D004571 ORTHO05D005334 1.1e-18 96.7 76 64.5
Atru.chr13.2366 Acer truncatum HOM05D004571 ORTHO05D005334 1.9e-18 95.9 64 70.3
BcaC06g34972 Brassica carinata HOM05D004571 ORTHO05D005334 1.9e-18 95.9 59 89.8
Sabra13G0091300 Salix brachista HOM05D004571 ORTHO05D005334 1.9e-18 95.9 78 62.8
Potri.013G105766 Populus trichocarpa HOM05D004571 ORTHO05D005334 2.5e-18 95.5 78 59.0
VMungo1080G1505 Vigna mungo HOM05D004571 ORTHO05D005334 5.5e-18 94.4 64 68.8
Gohir.D13G122900 Gossypium hirsutum HOM05D004571 ORTHO05D005334 7.2e-18 94.0 70 67.1
Gohir.D13G123000 Gossypium hirsutum HOM05D004571 ORTHO05D005334 7.2e-18 94.0 70 67.1
Gorai.013G137900 Gossypium raimondii HOM05D004571 ORTHO05D005334 7.2e-18 94.0 70 67.1
Manes.02G223200 Manihot esculenta HOM05D004571 ORTHO05D005334 7.2e-18 94.0 62 67.7
MD08G1217900 Malus domestica HOM05D004571 ORTHO05D005334 9.4e-18 93.6 69 63.8
TWI14G1164 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 9.4e-18 93.6 74 60.8
MD15G1405800 Malus domestica HOM05D004571 ORTHO05D005334 1.2e-17 93.2 64 67.2
Sc23g0001520 Simmondsia chinensis HOM05D004571 ORTHO05D005334 1.2e-17 93.2 64 68.8
AUR62004601 Chenopodium quinoa HOM05D004571 ORTHO05D005334 1.6e-17 92.8 68 63.2
AUR62023543 Chenopodium quinoa HOM05D004571 ORTHO05D005334 1.6e-17 92.8 68 63.2
ClCG08G000160 Citrullus lanatus HOM05D004571 ORTHO05D005334 1.6e-17 92.8 75 62.7
Gohir.A13G119100 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.6e-17 92.8 70 65.7
HanXRQChr02g0036591 Helianthus annuus HOM05D004571 ORTHO05D005334 1.6e-17 92.8 76 60.5
Prupe.1G555400 Prunus persica HOM05D004571 ORTHO05D005334 1.6e-17 92.8 76 61.8
MELO3C022229.2 Cucumis melo HOM05D004571 ORTHO05D005334 2.1e-17 92.4 75 62.7
Potri.019G079101 Populus trichocarpa HOM05D004571 ORTHO05D005334 2.1e-17 92.4 66 65.2
ATR1136G048 Amborella trichopoda HOM05D004571 ORTHO05D005334 2.7e-17 92.0 64 68.8
CiPaw.08G002900 Carya illinoinensis HOM05D004571 ORTHO05D005334 2.7e-17 92.0 76 61.8
Thhalv10019513m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 3.6e-17 91.7 90 61.1
Phvul.005G000100 Phaseolus vulgaris HOM05D004571 ORTHO05D005334 3.6e-17 91.7 85 57.6
CsaV3_5G040560 Cucumis sativus L. HOM05D004571 ORTHO05D005334 4.7e-17 91.3 75 61.3
Lsat_1_v5_gn_1_25881 Lactuca sativa HOM05D004571 ORTHO05D005334 4.7e-17 91.3 78 61.5
TAR381G0940 Trochodendron aralioides HOM05D004571 ORTHO05D005334 4.7e-17 91.3 70 64.3
DCAR_014081 Daucus carota HOM05D004571 ORTHO05D005334 6.1e-17 90.9 72 61.1
Glyma.06G325200 Glycine max HOM05D004571 ORTHO05D005334 6.1e-17 90.9 77 59.7
Gohir.A13G119200 Gossypium hirsutum HOM05D004571 ORTHO05D005334 6.1e-17 90.9 70 65.7
Medtr3g005050 Medicago truncatula HOM05D004571 ORTHO05D005334 6.1e-17 90.9 64 67.2
QL02p026432 Quercus lobata HOM05D004571 ORTHO05D005334 6.1e-17 90.9 88 56.8
Ah.05g178570 Amaranthus hybridus HOM05D004571 ORTHO05D005334 7.9e-17 90.5 69 62.3
EL10Ac1g00135 Beta vulgaris HOM05D004571 ORTHO05D005334 7.9e-17 90.5 88 53.4
Glyma.04G256400 Glycine max HOM05D004571 ORTHO05D005334 7.9e-17 90.5 77 59.7
Hma1.2p1_0374F.1_g138460 Hydrangea macrophylla HOM05D004571 ORTHO05D005334 7.9e-17 90.5 76 60.5
TAR628G0297 Trochodendron aralioides HOM05D004571 ORTHO05D005334 1.0e-16 90.1 85 54.1
Oeu044957.1 Olea europaea HOM05D004571 ORTHO05D005334 1.4e-16 89.7 70 62.9
PSO017G1736 Papaver somniferum HOM05D004571 ORTHO05D005334 1.4e-16 89.7 87 55.2
HanXRQChr04g0101791 Helianthus annuus HOM05D004571 ORTHO05D005334 1.8e-16 89.4 70 65.7
PSO170G5138 Papaver somniferum HOM05D004571 ORTHO05D005334 1.8e-16 89.4 87 54.0
Zm00001eb063990 Zea mays HOM05D004571 ORTHO05D005334 1.8e-16 89.4 76 56.6
Ca_13497_v3 Cicer arietinum L. HOM05D004571 ORTHO05D005334 2.3e-16 89.0 71 60.6
RcHm_v2.0_Chr7g0227581 Rosa chinensis HOM05D004571 ORTHO05D005334 2.3e-16 89.0 72 61.1
Hund27115 Selenicereus undatus HOM05D004571 ORTHO05D005334 2.3e-16 89.0 76 55.3
CANSAT25G3741 Cannabis sativa HOM05D004571 ORTHO05D005334 3.0e-16 88.6 81 58.0
CDE02G1838 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 3.9e-16 88.2 71 63.4
CDE08G1034 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 3.9e-16 88.2 76 60.5
ECA247G3605 Erigeron canadensis HOM05D004571 ORTHO05D005334 3.9e-16 88.2 71 59.2
FAN13G1323 Fragaria x ananassa HOM05D004571 ORTHO05D005334 3.9e-16 88.2 78 61.5
Dinv41758 Davidia involucrata HOM05D004571 ORTHO05D005334 5.1e-16 87.8 70 60.0
FvH4_5g31700 Fragaria vesca HOM05D004571 ORTHO05D005334 6.7e-16 87.4 78 60.3
FAN04G0250 Fragaria x ananassa HOM05D004571 ORTHO05D005334 6.7e-16 87.4 78 61.5
Nn1g08340 Nelumbo nucifera HOM05D004571 ORTHO05D005334 6.7e-16 87.4 64 64.1
Sed0021715 Sechium edule HOM05D004571 ORTHO05D005334 6.7e-16 87.4 80 57.5
TPR.G25514 Trifolium pratense HOM05D004571 ORTHO05D005334 6.7e-16 87.4 62 64.5
FAN18G0720 Fragaria x ananassa HOM05D004571 ORTHO05D005334 8.8e-16 87.0 78 59.0
arahy.Tifrunner.gnm1.ann1.ET922W Arachis hypogaea HOM05D004571 ORTHO05D005334 1.1e-15 86.7 70 57.1
arahy.Tifrunner.gnm1.ann1.Q0KDHL Arachis hypogaea HOM05D008831 ORTHO05D005334 1.1e-15 86.7 70 57.1
Rhsim11G0053000 Rhododendron simsii HOM05D004571 ORTHO05D005334 1.5e-15 86.3 74 60.8
Sabra19G0089800 Salix brachista HOM05D004571 ORTHO05D005334 1.5e-15 86.3 80 53.8
Lj3g0024961 Lotus japonicus HOM05D004571 ORTHO05D005334 2.0e-15 85.9 62 64.5
Os03g0840900 Oryza sativa ssp. japonica HOM05D004571 ORTHO05D005334 2.0e-15 85.9 70 57.1
Psat1g003360 Pisum sativum HOM05D004571 ORTHO05D005334 2.0e-15 85.9 64 64.1
unitig_26.g9866 Utricularia gibba HOM05D004571 ORTHO05D005334 2.0e-15 85.9 79 57.0
Migut.C01321 Erythranthe guttata HOM05D004571 ORTHO05D005334 2.6e-15 85.5 85 55.3
SalBow7G4145 Salvia bowleyana HOM05D004571 ORTHO05D005334 2.6e-15 85.5 70 54.3
Actinidia29414 Actinidia chinensis HOM05D004571 ORTHO05D005334 3.3e-15 85.1 78 55.1
Aqoxy5G02645 Aquilegia oxysepala HOM05D004571 ORTHO05D005334 3.3e-15 85.1 86 54.7
GSVIVG01026083001 Vitis vinifera HOM05D004571 ORTHO05D005334 3.3e-15 85.1 61 63.9
DCAR_017443 Daucus carota HOM05D004571 ORTHO05D005334 7.4e-15 84.0 84 51.2
Nn5g27495 Nelumbo nucifera HOM05D004571 ORTHO05D005334 7.4e-15 84.0 85 49.4
PGR042G2098 Punica granatum HOM05D004571 ORTHO05D005334 1.7e-14 82.8 70 54.3
HPP92_012688 Vanilla planifolia HOM05D004571 ORTHO05D005334 3.7e-14 81.6 64 60.9
CANSAT56G3739 Cannabis sativa HOM05D004571 ORTHO05D005334 4.8e-14 81.3 76 55.3
SEGI_09168 Sequoiadendron giganteum HOM05D004571 ORTHO05D005334 6.3e-14 80.9 92 46.7
HPP92_016944 Vanilla planifolia HOM05D004571 ORTHO05D005334 6.3e-14 80.9 61 60.7
Actinidia03516 Actinidia chinensis HOM05D004571 ORTHO05D005334 8.2e-14 80.5 78 51.3
SGA_v2.0_scaffold24G10606 Striga asiatica HOM05D004571 ORTHO05D005334 8.2e-14 80.5 59 61.0
HPP92_012699 Vanilla planifolia HOM05D004571 ORTHO05D005334 1.1e-13 80.1 64 59.4
CANSAT80G2522 Cannabis sativa HOM05D004571 ORTHO05D005334 1.8e-13 79.3 67 58.2
ECA246G2468 Erigeron canadensis HOM05D004571 ORTHO05D005334 1.8e-13 79.3 66 60.6
SalBow5G3518 Salvia bowleyana HOM05D002016 ORTHO05D002251 2.4e-13 79.0 76 48.7
Zm00001eb211000 Zea mays HOM05D004571 ORTHO05D005334 3.1e-13 78.6 70 52.9
CSS0010340 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 4.1e-13 78.2 77 53.2
HanXRQChr13g0402341 Helianthus annuus HOM05D004571 ORTHO05D005334 5.3e-13 77.8 69 56.5
MBI16_g31756_MAGBIO Magnolia biondii HOM05D004571 ORTHO05D005334 5.3e-13 77.8 66 57.6
MD17G1233400 Malus domestica HOM05D004571 ORTHO05D005334 7.0e-13 77.4 76 53.9
Nitab4.5_0001463g0030 Nicotiana tabacum HOM05D004571 ORTHO05D005334 7.0e-13 77.4 61 60.7
Nitab4.5_0005616g0050 Nicotiana tabacum HOM05D004571 ORTHO05D005334 7.0e-13 77.4 61 60.7
PGSC0003DMG400025645 Solanum tuberosum HOM05D004571 ORTHO05D005334 7.0e-13 77.4 77 51.9
Cc10_g09660 Coffea canephora HOM05D004571 ORTHO05D005334 9.1e-13 77.0 70 50.0
Solyc11g027870.2 Solanum lycopersicum HOM05D004571 ORTHO05D005334 1.2e-12 76.6 75 52.0
Sopen11g022630 Solanum pennellii HOM05D004571 ORTHO05D005334 1.2e-12 76.6 75 52.0
Duzib116G0804 Durio zibethinus HOM05D004571 ORTHO05D005334 2.6e-12 75.5 103 45.6
Mapoly0097s0059 Marchantia polymorpha HOM05D004571 ORTHO05D005334 2.6e-12 75.5 75 54.7
AagrBONN_evm.TU.Sc2ySwM_344.525 Anthoceros agrestis HOM05D004571 ORTHO05D005334 1.3e-11 73.2 79 50.6
SMO170G0007 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 3.8e-11 71.6 63 57.1
Peaxi162Scf00688g00440 Petunia axillaris HOM05D004571 ORTHO05D005334 8.5e-11 70.5 60 55.0
Pp3c6_25110 Physcomitrium patens HOM05D004571 ORTHO05D005334 1.1e-10 70.1 79 50.6
Pp3c5_3370 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.5e-10 68.9 80 48.8
PSO170G6605 Papaver somniferum HOM05D004571 ORTHO05D005334 4.2e-10 68.2 61 49.2
AagrBONN_evm.TU.Sc2ySwM_117.1227 Anthoceros agrestis HOM05D004571 ORTHO05D005334 7.2e-10 67.4 64 51.6
Peaxi162Scf00076g00210 Petunia axillaris HOM05D004571 ORTHO05D005334 9.4e-10 67.0 73 47.9
SalBow8G4375 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.6e-09 66.2 58 53.4
CBR_g28554 Chara braunii HOM05D004571 ORTHO05D005334 3.6e-09 65.1 61 52.5
SalBow1G4736 Salvia bowleyana HOM05D004571 ORTHO05D005334 4.7e-09 64.7 58 51.7
SalBow7G3147 Salvia bowleyana HOM05D004571 ORTHO05D005334 6.1e-09 64.3 58 51.7
Pp3c16_13970 Physcomitrium patens HOM05D004571 ORTHO05D005334 4.0e-08 61.6 89 41.6
SMO356G0601 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 1.1e-07 60.1 60 46.7
CSS0023243 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 3.3e-07 58.5 57 52.6
SalBow1G5773 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.7e-06 56.2 52 50.0
PRCOL_00006286 Prasinoderma coloniale HOM05D004571 ORTHO05D005334 2.2e-06 55.8 76 44.7


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