Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p13320 Brassica napus HOM05D004011 ORTHO05D005290 6.2e-64 247.3 124 100.0
A07p13600 Brassica napus HOM05D004011 ORTHO05D100703 4.3e-49 198.0 123 82.9
C07p19930 Brassica napus HOM05D004011 ORTHO05D005290 2.6e-25 119.0 61 93.4
BolC7t42512H Brassica oleracea HOM05D004011 ORTHO05D005290 2.6e-25 119.0 61 93.4
A07p13340 Brassica napus HOM05D004011 ORTHO05D005290 1.9e-20 102.8 81 65.4
CARHR024790 Cardamine hirsuta HOM05D004011 ORTHO05D005290 1.4e-18 96.7 55 83.6
Thhalv10007979m.g Eutrema salsugineum HOM05D004011 ORTHO05D005290 1.8e-18 96.3 55 85.5
BolC8t49891H Brassica oleracea HOM05D004011 ORTHO05D005290 3.0e-18 95.5 55 81.8
BcaB03g11978 Brassica carinata HOM05D004011 ORTHO05D005290 4.0e-18 95.1 53 84.9
BraA07t29103Z Brassica rapa HOM05D001102 ORTHO05D021602 4.0e-18 95.1 48 95.8
BcaC07g39250 Brassica carinata HOM05D004011 ORTHO05D005290 8.8e-18 94.0 55 80.0
C08p22550 Brassica napus HOM05D004011 ORTHO05D005290 8.8e-18 94.0 55 80.0
A08p27740 Brassica napus HOM05D004011 ORTHO05D005290 1.5e-17 93.2 55 80.0
BraA08t34710Z Brassica rapa HOM05D004011 ORTHO05D005290 1.5e-17 93.2 55 80.0
Sp1g21670 Schrenkiella parvula HOM05D004011 ORTHO05D005290 2.6e-17 92.4 55 80.0
Carub.0001s2386 Capsella rubella HOM05D004011 ORTHO05D005290 3.4e-17 92.0 55 80.0
BcaB03g14111 Brassica carinata HOM05D004011 ORTHO05D005290 8.3e-16 87.4 55 80.0
Atru.chr5.3340 Acer truncatum HOM05D004011 ORTHO05D005290 3.5e-14 82.0 61 63.9
Atru.chr11.1880 Acer truncatum HOM05D004011 ORTHO05D005290 4.5e-14 81.6 64 60.9
Potri.010G035400 Populus trichocarpa HOM05D004011 ORTHO05D005290 5.9e-14 81.3 64 59.4
Atru.chr1.621 Acer truncatum HOM05D004011 ORTHO05D005290 1.3e-13 80.1 61 62.3
COL.COLO4_36215 Corchorus olitorius HOM05D004011 ORTHO05D005290 1.7e-13 79.7 64 59.4
Sabra10G0029400 Salix brachista HOM05D004011 ORTHO05D005290 1.7e-13 79.7 64 57.8
Thecc.02G234800 Theobroma cacao HOM05D004011 ORTHO05D005290 1.7e-13 79.7 64 57.8
DCAR_031068 Daucus carota HOM05D004011 ORTHO05D005290 2.9e-13 79.0 115 45.2
Lsat_1_v5_gn_8_163421 Lactuca sativa HOM05D004011 ORTHO05D005290 2.9e-13 79.0 53 69.8
TAR622G0281 Trochodendron aralioides HOM05D004011 ORTHO05D005290 2.9e-13 79.0 64 57.8
Eucgr.B03399 Eucalyptus grandis HOM05D004011 ORTHO05D005290 5.0e-13 78.2 64 60.9
Manes.01G192600 Manihot esculenta HOM05D004011 ORTHO05D005290 5.0e-13 78.2 64 57.8
Cpa.g.sc5.292 Carica papaya HOM05D004011 ORTHO05D005290 6.5e-13 77.8 126 40.5
RcHm_v2.0_Chr4g0445221 Rosa chinensis HOM05D004011 ORTHO05D005290 6.5e-13 77.8 53 66.0
THA.LOC104822935 Tarenaya hassleriana HOM05D004011 ORTHO05D005290 6.5e-13 77.8 53 69.8
Duzib251G0283 Durio zibethinus HOM05D004011 ORTHO05D005290 8.5e-13 77.4 64 54.7
Lj3C1043T17 Lonicera japonica HOM05D004011 ORTHO05D005290 8.5e-13 77.4 64 54.7
Nn3g17098 Nelumbo nucifera HOM05D004011 ORTHO05D005290 8.5e-13 77.4 64 56.2
ATR0001G025 Amborella trichopoda HOM05D004011 ORTHO05D005290 1.1e-12 77.0 55 63.6
Atru.chr9.2355 Acer truncatum HOM05D004011 ORTHO05D005290 1.5e-12 76.6 64 60.9
Os03g0689900 Oryza sativa ssp. japonica HOM05D004011 ORTHO05D005290 2.5e-12 75.9 55 63.6
MBI01_g01221_MAGBIO Magnolia biondii HOM05D004011 ORTHO05D005290 3.2e-12 75.5 56 60.7
C07p19960 Brassica napus HOM05D004011 ORTHO05D005290 4.2e-12 75.1 51 74.5
Cfa009061 Carpinus fangiana HOM05D004011 ORTHO05D005290 4.2e-12 75.1 56 58.9
QL03p066429 Quercus lobata HOM05D004011 ORTHO05D005290 4.2e-12 75.1 64 56.2
FvH4_4g35610 Fragaria vesca HOM05D004011 ORTHO05D005290 5.5e-12 74.7 53 66.0
FAN07G2799 Fragaria x ananassa HOM05D004011 ORTHO05D005290 5.5e-12 74.7 53 62.3
FAN22G2312 Fragaria x ananassa HOM05D004011 ORTHO05D005290 5.5e-12 74.7 53 66.0
TAR636G0334 Trochodendron aralioides HOM05D004011 ORTHO05D005290 5.5e-12 74.7 53 64.2
BcaC06g35090 Brassica carinata HOM05D004011 ORTHO05D005290 7.2e-12 74.3 51 74.5
Actinidia19850 Actinidia chinensis HOM05D004011 ORTHO05D005290 9.4e-12 73.9 53 60.4
AT1G27110 Arabidopsis thaliana HOM05D004011 ORTHO05D005290 9.4e-12 73.9 64 60.9
CSS0048676 Camellia sinensis var. sinensis HOM05D004011 ORTHO05D005290 9.4e-12 73.9 53 62.3
CiPaw.05G142000 Carya illinoinensis HOM05D004011 ORTHO05D005290 9.4e-12 73.9 64 53.1
Ca_04688_v3 Cicer arietinum L. HOM05D004011 ORTHO05D005290 1.2e-11 73.6 53 62.3
FAN17G1440 Fragaria x ananassa HOM05D004011 ORTHO05D005290 1.2e-11 73.6 53 60.4
Gohir.D01G133600 Gossypium hirsutum HOM05D004011 ORTHO05D005290 1.2e-11 73.6 64 53.1
Prupe.1G265000 Prunus persica HOM05D004011 ORTHO05D005290 1.2e-11 73.6 53 60.4
VMungo1215G2281 Vigna mungo HOM05D004011 ORTHO05D005290 1.2e-11 73.6 64 54.7
Zm00001eb053520 Zea mays HOM05D004011 ORTHO05D005290 1.2e-11 73.6 56 57.1
Lj2g0011655 Lotus japonicus HOM05D004011 ORTHO05D005290 1.6e-11 73.2 53 62.3
Actinidia08203 Actinidia chinensis HOM05D004011 ORTHO05D005290 2.1e-11 72.8 53 58.5
FAN12G0945 Fragaria x ananassa HOM05D004011 ORTHO05D005290 2.1e-11 72.8 53 64.2
MD16G1081000 Malus domestica HOM05D004011 ORTHO05D005290 2.1e-11 72.8 51 64.7
Gohir.A01G142100 Gossypium hirsutum HOM05D004011 ORTHO05D005290 2.7e-11 72.4 64 51.6
Gorai.002G165100 Gossypium raimondii HOM05D004011 ORTHO05D005290 2.7e-11 72.4 52 61.5
Peaxi162Scf00209g00842 Petunia axillaris HOM05D004011 ORTHO05D005290 2.7e-11 72.4 64 54.7
HanXRQChr12g0371081 Helianthus annuus HOM05D004011 ORTHO05D005290 3.6e-11 72.0 53 62.3
Cc11_g13670 Coffea canephora HOM05D004011 ORTHO05D005290 4.7e-11 71.6 53 58.5
Cc11_g13690 Coffea canephora HOM05D004011 ORTHO05D005290 4.7e-11 71.6 115 39.1
CDE06G1386 Ceratophyllum demersum HOM05D004011 ORTHO05D005290 8.0e-11 70.9 63 55.6
CANSAT01G0183 Cannabis sativa HOM05D004011 ORTHO05D005290 1.4e-10 70.1 53 62.3
Lalb_Chr09g0326751 Lupinus albus HOM05D004011 ORTHO05D005290 1.4e-10 70.1 53 56.6
SGA_v2.0_scaffold166G38295 Striga asiatica HOM05D004011 ORTHO05D005290 1.4e-10 70.1 53 58.5
GSVIVG01020097001 Vitis vinifera HOM05D004011 ORTHO05D005290 1.4e-10 70.1 64 51.6
CAN.G27.36 Capsicum annuum HOM05D004011 ORTHO05D005290 2.3e-10 69.3 64 51.6
Migut.L01360 Erythranthe guttata HOM05D004011 ORTHO05D005290 2.3e-10 69.3 55 58.2
Glyma.02G024500 Glycine max HOM05D004011 ORTHO05D005290 2.3e-10 69.3 64 51.6
Phvul.002G080300 Phaseolus vulgaris HOM05D004011 ORTHO05D005290 2.3e-10 69.3 64 51.6
Sed0020834 Sechium edule HOM05D004011 ORTHO05D005290 2.3e-10 69.3 64 51.6
TPR.G26722 Trifolium pratense HOM05D004011 ORTHO05D005290 2.3e-10 69.3 53 56.6
vmacro01220 Vaccinium macrocarpon HOM05D004011 ORTHO05D005290 2.3e-10 69.3 53 58.5
Medtr5g037400 Medicago truncatula HOM05D004011 ORTHO05D005290 3.0e-10 68.9 64 50.0
BolC7t42515H Brassica oleracea HOM05D004011 ORTHO05D005290 4.0e-10 68.6 42 81.0
AUR62026286 Chenopodium quinoa HOM05D004011 ORTHO05D005290 4.0e-10 68.6 53 58.5
CsaV3_5G032130 Cucumis sativus L. HOM05D004011 ORTHO05D005290 4.0e-10 68.6 64 51.6
PSO782G5642 Papaver somniferum HOM05D004011 ORTHO05D005290 4.0e-10 68.6 53 58.5
ECA248G0235 Erigeron canadensis HOM05D004011 ORTHO05D005290 5.2e-10 68.2 52 65.4
PSO423G0236 Papaver somniferum HOM05D004011 ORTHO05D005290 5.2e-10 68.2 53 58.5
Aqoxy3G03233 Aquilegia oxysepala HOM05D004011 ORTHO05D005290 6.8e-10 67.8 53 58.5
arahy.Tifrunner.gnm1.ann1.XM7912 Arachis hypogaea HOM05D004011 ORTHO05D005290 6.8e-10 67.8 64 50.0
Glyma.01G040300 Glycine max HOM05D004011 ORTHO05D005290 6.8e-10 67.8 64 51.6
Thhalv10007555m.g Eutrema salsugineum HOM05D004011 ORTHO05D005290 8.8e-10 67.4 53 58.5
Oeu028543.1 Olea europaea HOM05D004011 ORTHO05D005290 8.8e-10 67.4 53 58.5
Psat2g115960 Pisum sativum HOM05D004011 ORTHO05D005290 8.8e-10 67.4 52 57.7
THA.LOC104822089 Tarenaya hassleriana HOM05D004011 ORTHO05D005290 1.2e-09 67.0 113 39.8
Hma1.2p1_1045F.1_g251340 Hydrangea macrophylla HOM05D004011 ORTHO05D005290 1.5e-09 66.6 60 50.0
ClCG05G024760 Citrullus lanatus HOM05D004011 ORTHO05D005290 2.0e-09 66.2 64 51.6
Nitab4.5_0000408g0060 Nicotiana tabacum HOM05D004011 ORTHO05D005290 2.6e-09 65.9 64 50.0
Sc11g0001560 Simmondsia chinensis HOM05D004011 ORTHO05D005290 2.6e-09 65.9 53 58.5
unitig_22.g6920 Utricularia gibba HOM05D004011 ORTHO05D005290 2.6e-09 65.9 64 48.4
AUR62026479 Chenopodium quinoa HOM05D004011 ORTHO05D005290 3.4e-09 65.5 53 56.6
SalBow2G3145 Salvia bowleyana HOM05D004011 ORTHO05D005290 3.4e-09 65.5 64 50.0
TWI36G1736 Tripterygium wilfordii HOM05D004011 ORTHO05D005290 3.4e-09 65.5 53 52.8
arahy.Tifrunner.gnm1.ann1.SQ07EG Arachis hypogaea HOM05D004011 ORTHO05D005290 4.4e-09 65.1 64 46.9
MELO3C012048.2 Cucumis melo HOM05D004011 ORTHO05D005290 4.4e-09 65.1 64 50.0
AT1G27150 Arabidopsis thaliana HOM05D004011 ORTHO05D005290 5.7e-09 64.7 53 56.6
EL10Ac6g13125 Beta vulgaris HOM05D004011 ORTHO05D005290 7.5e-09 64.3 53 52.8
Hund05926 Selenicereus undatus HOM05D004011 ORTHO05D005290 7.5e-09 64.3 53 54.7
Solyc05g006760.4 Solanum lycopersicum HOM05D004011 ORTHO05D005290 7.5e-09 64.3 64 51.6
Sopen05g002700 Solanum pennellii HOM05D004011 ORTHO05D005290 7.5e-09 64.3 64 51.6
Ciclev10031073m.g Citrus clementina HOM05D004011 ORTHO05D005290 9.8e-09 63.9 53 50.9
Carub.0001s2380 Capsella rubella HOM05D004011 ORTHO05D005290 1.3e-08 63.5 53 56.6
PGSC0003DMG400022621 Solanum tuberosum HOM05D004011 ORTHO05D005290 1.3e-08 63.5 64 50.0
Sp1g21620 Schrenkiella parvula HOM05D004011 ORTHO05D005290 1.7e-08 63.2 53 56.6
Aa31LG7G8050 Aethionema arabicum HOM05D004011 ORTHO05D005290 2.2e-08 62.8 53 54.7
BcaC05g26340 Brassica carinata HOM05D004011 ORTHO05D005290 2.2e-08 62.8 53 56.6
A09p40530 Brassica napus HOM05D004011 ORTHO05D005290 2.2e-08 62.8 53 56.6
C05p23640 Brassica napus HOM05D004011 ORTHO05D005290 2.2e-08 62.8 53 56.6
BolC5t31073H Brassica oleracea HOM05D004011 ORTHO05D005290 2.2e-08 62.8 53 56.6
BolC5t31078H Brassica oleracea HOM05D004011 ORTHO05D005290 2.2e-08 62.8 53 56.6
BraA09t39549Z Brassica rapa HOM05D004011 ORTHO05D005290 2.2e-08 62.8 53 56.6
Nitab4.5_0001726g0090 Nicotiana tabacum HOM05D004011 ORTHO05D005290 2.2e-08 62.8 64 48.4
BcaB03g14114 Brassica carinata HOM05D004011 ORTHO05D005290 3.7e-08 62.0 53 54.7
AL1G38330 Arabidopsis lyrata HOM05D004011 ORTHO05D005290 4.9e-08 61.6 53 52.8
BcaC06g35087 Brassica carinata HOM05D004011 ORTHO05D005290 8.3e-08 60.8 53 56.6
C07p20000 Brassica napus HOM05D004011 ORTHO05D005290 8.3e-08 60.8 53 56.6
BolC7t42519H Brassica oleracea HOM05D004011 ORTHO05D005290 8.3e-08 60.8 53 56.6
A07p13510 Brassica napus HOM05D004011 ORTHO05D005290 1.4e-07 60.1 53 54.7
A07p13370 Brassica napus HOM05D004011 ORTHO05D005290 1.8e-07 59.7 53 54.7
BraA07t29109Z Brassica rapa HOM05D004011 ORTHO05D005290 1.8e-07 59.7 53 54.7
CARHR024720 Cardamine hirsuta HOM05D004011 ORTHO05D005290 1.8e-07 59.7 53 54.7
BcaC07g37560 Brassica carinata HOM05D004011 ORTHO05D005290 3.1e-07 58.9 53 52.8
A08p08630 Brassica napus HOM05D004011 ORTHO05D005290 3.1e-07 58.9 53 52.8
BolC8t47901H Brassica oleracea HOM05D004011 ORTHO05D005290 3.1e-07 58.9 53 52.8
arahy.Tifrunner.gnm1.ann1.DHW1RD Arachis hypogaea HOM05D004011 ORTHO05D005290 2.7e-06 55.8 60 43.3


User provided reference genes

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