Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 2.1e-95 352.4 188 100.0
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 5.7e-93 344.4 188 97.3
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 3.7e-84 315.1 204 84.3
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 3.7e-84 315.1 204 84.3
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 2.0e-82 309.3 204 82.8
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 1.8e-78 296.2 207 81.6
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 7.5e-69 264.2 209 73.7
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 1.7e-68 263.1 208 72.6
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 2.9e-65 252.3 208 71.6
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 5.0e-65 251.5 207 68.6
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.2e-63 246.9 204 73.0
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 8.3e-60 234.2 218 66.1
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 2.4e-59 232.6 207 69.1
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 7.5e-53 211.1 206 61.7
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 4.3e-48 195.3 203 55.2
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 1.8e-46 189.9 199 56.3
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 6.8e-46 188.0 204 57.4
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 4.4e-45 185.3 199 56.8
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 4.4e-45 185.3 206 57.3
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.7e-44 183.3 198 54.0
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.7e-44 183.3 200 56.5
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.4e-43 180.3 113 88.5
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 1.9e-43 179.9 198 53.0
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 3.2e-43 179.1 198 53.5
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 5.4e-43 178.3 210 55.2
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 7.8e-42 174.5 202 54.0
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 7.8e-42 174.5 203 55.7
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 1.3e-41 173.7 199 52.3
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 2.3e-41 172.9 205 51.7
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.0e-41 172.6 199 53.3
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.9e-41 172.2 205 52.2
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 8.6e-41 171.0 199 56.3
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.9e-40 169.9 199 52.3
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.6e-39 166.8 205 49.8
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 2.1e-39 166.4 197 51.8
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 2.1e-39 166.4 199 54.3
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 3.6e-39 165.6 198 49.0
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 3.6e-39 165.6 199 52.3
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 4.7e-39 165.2 193 49.2
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 6.2e-39 164.9 199 55.8
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 8.1e-39 164.5 199 52.3
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 8.1e-39 164.5 199 54.3
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 1.4e-38 163.7 199 53.8
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 4.0e-38 162.2 206 51.5
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 5.2e-38 161.8 196 51.5
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 5.2e-38 161.8 199 52.8
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 8.9e-38 161.0 200 54.0
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 1.5e-37 160.2 227 46.3
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 2.0e-37 159.8 199 51.3
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 2.0e-37 159.8 196 49.5
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.6e-37 159.5 190 49.5
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 9.9e-37 157.5 207 47.8
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.3e-36 157.1 193 53.9
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 1.7e-36 156.8 202 50.5
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 1.7e-36 156.8 192 52.1
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 3.7e-36 155.6 203 46.3
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 4.9e-36 155.2 200 52.0
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 3.2e-35 152.5 191 51.3
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 3.2e-35 152.5 191 48.2
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.6e-34 148.7 205 47.8
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 6.0e-34 148.3 170 48.2
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.0e-33 147.5 201 48.3
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.7e-33 146.7 160 53.1
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.3e-33 146.4 198 48.5
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 3.0e-33 146.0 213 42.7
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 3.9e-33 145.6 209 43.5
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 6.6e-33 144.8 203 49.3
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 8.6e-33 144.4 146 58.2
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 4.3e-32 142.1 146 55.5
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 4.3e-32 142.1 200 45.0
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 5.6e-32 141.7 152 55.3
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 3.6e-31 139.0 198 49.0
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 6.2e-31 138.3 195 48.7
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.8e-30 136.7 211 41.7
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 4.0e-30 135.6 200 43.0
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 8.9e-30 134.4 162 50.0
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.5e-29 133.7 211 40.8
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.5e-29 133.7 211 40.8
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 3.4e-29 132.5 206 43.7
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 9.9e-29 131.0 211 39.8
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.3e-28 130.6 203 43.8
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 3.8e-28 129.0 147 53.1
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.1e-27 127.5 233 38.2
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 2.4e-27 126.3 221 38.5
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 3.2e-27 125.9 205 43.9
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 2.1e-26 123.2 211 38.9
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 3.0e-25 119.4 251 37.8
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 6.6e-25 118.2 140 49.3
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.1e-24 117.5 213 38.5
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.6e-23 113.6 218 36.2
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 3.6e-23 112.5 118 54.2
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 6.2e-23 111.7 194 39.7
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 6.2e-23 111.7 143 49.7
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.4e-22 110.5 135 52.6
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 4.0e-22 109.0 226 35.8
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.2e-21 107.5 196 40.3
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 5.8e-21 105.1 126 52.4
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 7.6e-21 104.8 189 36.5
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 4.9e-20 102.1 156 41.7
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 1.0e-17 94.4 121 47.9
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.1e-10 70.1 88 51.1


User provided reference genes

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