Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p12930 Brassica napus HOM05D004724 ORTHO05D005734 9.6e-33 142.9 72 100.0
BraA07t29066Z Brassica rapa HOM05D004724 ORTHO05D005734 9.6e-33 142.9 72 100.0
C07p19370 Brassica napus HOM05D004724 ORTHO05D005734 1.3e-29 132.5 71 93.0
BolC7t42456H Brassica oleracea HOM05D004724 ORTHO05D005734 9.3e-28 126.3 70 91.4
CARHR025500 Cardamine hirsuta HOM05D004724 ORTHO05D005734 1.5e-25 119.0 70 80.0
AL1G39280 Arabidopsis lyrata HOM05D004724 ORTHO05D005734 7.4e-25 116.7 70 78.6
Thhalv10007071m.g Eutrema salsugineum HOM05D004724 ORTHO05D005734 2.1e-24 115.2 70 77.1
BraA09t39487Z Brassica rapa HOM05D004724 ORTHO05D005734 2.8e-24 114.8 70 78.6
AT1G26460 Arabidopsis thaliana HOM05D004724 ORTHO05D005734 4.8e-24 114.0 70 78.6
C05p24540 Brassica napus HOM05D004724 ORTHO05D005734 4.8e-24 114.0 70 80.0
Carub.0001s2456 Capsella rubella HOM05D004724 ORTHO05D005734 8.2e-24 113.2 70 77.1
A09p39880 Brassica napus HOM05D004724 ORTHO05D005734 1.1e-23 112.8 70 77.1
THA.LOC104822013 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 1.1e-23 112.8 70 72.9
BolC5t31188H Brassica oleracea HOM05D004724 ORTHO05D005734 2.4e-23 111.7 70 78.6
TAR374G1337 Trochodendron aralioides HOM05D004724 ORTHO05D005734 9.0e-23 109.8 69 73.9
Prupe.1G286100 Prunus persica HOM05D004724 ORTHO05D005734 2.6e-22 108.2 70 65.7
Nn4g23396 Nelumbo nucifera HOM05D004724 ORTHO05D005734 1.0e-21 106.3 69 71.0
MD13G1063400 Malus domestica HOM05D004724 ORTHO05D005734 3.8e-21 104.4 70 68.6
TAR622G0524 Trochodendron aralioides HOM05D004724 ORTHO05D005734 5.0e-21 104.0 69 68.1
Cfa008886 Carpinus fangiana HOM05D004724 ORTHO05D005734 6.5e-21 103.6 69 68.1
CiPaw.05G125900 Carya illinoinensis HOM05D004724 ORTHO05D005734 8.4e-21 103.2 69 65.2
Nn3g17424 Nelumbo nucifera HOM05D004724 ORTHO05D005734 8.4e-21 103.2 69 66.7
SGA_v2.0_scaffold16G07777 Striga asiatica HOM05D004724 ORTHO05D005734 8.4e-21 103.2 71 69.0
CiPaw.06G092100 Carya illinoinensis HOM05D004724 ORTHO05D005734 1.1e-20 102.8 69 68.1
COL.COLO4_27896 Corchorus olitorius HOM05D004724 ORTHO05D005734 1.9e-20 102.1 70 68.6
Lalb_Chr10g0098781 Lupinus albus HOM05D004724 ORTHO05D005734 1.9e-20 102.1 69 68.1
Hma1.2p1_0354F.1_g133420 Hydrangea macrophylla HOM05D004724 ORTHO05D005734 2.5e-20 101.7 69 66.7
QL03p072107 Quercus lobata HOM05D004724 ORTHO05D005734 2.5e-20 101.7 69 65.2
THA.LOC104805036 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 2.5e-20 101.7 70 68.6
Aa31LG7G8630 Aethionema arabicum HOM05D004724 ORTHO05D005734 3.2e-20 101.3 70 68.6
Cpa.g.sc1.117 Carica papaya HOM05D004724 ORTHO05D005734 3.2e-20 101.3 69 66.7
Gohir.D02G129300 Gossypium hirsutum HOM05D004724 ORTHO05D005734 3.2e-20 101.3 70 65.7
Gorai.005G145100 Gossypium raimondii HOM05D004724 ORTHO05D005734 3.2e-20 101.3 70 65.7
vmacro16381 Vaccinium macrocarpon HOM05D004724 ORTHO05D005734 4.2e-20 100.9 69 62.3
CANSAT64G0483 Cannabis sativa HOM05D004724 ORTHO05D005734 5.5e-20 100.5 70 61.4
TWI79G1393 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 5.5e-20 100.5 69 65.2
ClCG08G010390 Citrullus lanatus HOM05D004724 ORTHO05D005734 7.1e-20 100.1 68 69.1
Gohir.A03G104200 Gossypium hirsutum HOM05D004724 ORTHO05D005734 7.1e-20 100.1 70 64.3
MD16G1061800 Malus domestica HOM05D004724 ORTHO05D005734 7.1e-20 100.1 70 67.1
Actinidia28645 Actinidia chinensis HOM05D004724 ORTHO05D005734 9.3e-20 99.8 69 63.8
QL03p072513 Quercus lobata HOM05D004724 ORTHO05D005734 9.3e-20 99.8 69 63.8
GSVIVG01012211001 Vitis vinifera HOM05D004724 ORTHO05D005734 1.2e-19 99.4 69 65.2
Atru.chr11.1649 Acer truncatum HOM05D004724 ORTHO05D005734 2.1e-19 98.6 69 63.8
Eucgr.B03160 Eucalyptus grandis HOM05D004724 ORTHO05D005734 2.1e-19 98.6 69 62.3
Thecc.02G332500 Theobroma cacao HOM05D004724 ORTHO05D005734 2.1e-19 98.6 70 64.3
TWI31G1115 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 2.1e-19 98.6 69 62.3
MSTRG.13448 Avicennia marina HOM05D004724 ORTHO05D005734 2.7e-19 98.2 69 65.2
Migut.E00049 Erythranthe guttata HOM05D004724 ORTHO05D005734 3.5e-19 97.8 69 60.9
RcHm_v2.0_Chr4g0438491 Rosa chinensis HOM05D004724 ORTHO05D005734 3.5e-19 97.8 67 64.2
MBI16_g13587_MAGBIO Magnolia biondii HOM05D004724 ORTHO05D005734 4.6e-19 97.4 69 65.2
PGR102G0250 Punica granatum HOM05D004724 ORTHO05D005734 4.6e-19 97.4 69 60.9
TPR.G24471 Trifolium pratense HOM05D004724 ORTHO05D005734 4.6e-19 97.4 70 62.9
CsaV3_6G033660 Cucumis sativus L. HOM05D004724 ORTHO05D005734 6.1e-19 97.1 69 65.2
BcaC06g35143 Brassica carinata HOM05D004724 ORTHO05D005734 1.0e-18 96.3 54 90.7
MELO3C011422.2 Cucumis melo HOM05D004724 ORTHO05D005734 1.3e-18 95.9 69 65.2
Sed0014019 Sechium edule HOM05D004724 ORTHO05D005734 1.8e-18 95.5 69 62.3
FAN12G2645 Fragaria x ananassa HOM05D004724 ORTHO05D005734 2.3e-18 95.1 67 64.2
Peaxi162Scf00175g00020 Petunia axillaris HOM05D004724 ORTHO05D005734 2.3e-18 95.1 69 60.9
Zm00001eb108470 Zea mays HOM05D004724 ORTHO05D005734 2.3e-18 95.1 68 61.8
Nitab4.5_0000231g0420 Nicotiana tabacum HOM05D004724 ORTHO05D005734 3.0e-18 94.7 69 60.9
Nitab4.5_0004171g0040 Nicotiana tabacum HOM05D004724 ORTHO05D005734 3.0e-18 94.7 69 60.9
Solyc05g012390.4 Solanum lycopersicum HOM05D004724 ORTHO05D005734 3.0e-18 94.7 69 60.9
Ciclev10031249m.g Citrus clementina HOM05D004724 ORTHO05D005734 3.9e-18 94.4 69 62.3
Ca_04959_v3 Cicer arietinum L. HOM05D004724 ORTHO05D005734 5.1e-18 94.0 70 64.3
FvH4_4g30160 Fragaria vesca HOM05D004724 ORTHO05D005734 5.1e-18 94.0 67 62.7
Glyma.02G116000 Glycine max HOM05D004724 ORTHO05D005734 5.1e-18 94.0 70 62.9
SalBow2G3108 Salvia bowleyana HOM05D004724 ORTHO05D005734 5.1e-18 94.0 71 62.0
FAN22G1297 Fragaria x ananassa HOM05D004724 ORTHO05D005734 6.7e-18 93.6 67 62.7
Lj6A780T47 Lonicera japonica HOM05D004724 ORTHO05D005734 6.7e-18 93.6 69 62.3
PGSC0003DMG400028320 Solanum tuberosum HOM05D004724 ORTHO05D005734 6.7e-18 93.6 69 59.4
Medtr5g044270 Medicago truncatula HOM05D004724 ORTHO05D005734 8.7e-18 93.2 70 62.9
Sc04g0007630 Simmondsia chinensis HOM05D004724 ORTHO05D005734 8.7e-18 93.2 68 58.8
Sopen05g007210 Solanum pennellii HOM05D004724 ORTHO05D005734 8.7e-18 93.2 69 59.4
Cc11_g12080 Coffea canephora HOM05D004724 ORTHO05D005734 1.1e-17 92.8 69 59.4
Zm00001eb326730 Zea mays HOM05D004724 ORTHO05D005734 1.1e-17 92.8 68 60.3
Glyma.01G058200 Glycine max HOM05D004724 ORTHO05D005734 1.5e-17 92.4 70 62.9
CAN.G616.33 Capsicum annuum HOM05D004724 ORTHO05D005734 1.9e-17 92.0 69 58.0
SalBow8G1172 Salvia bowleyana HOM05D004724 ORTHO05D005734 2.5e-17 91.7 69 56.5
HanXRQChr08g0211831 Helianthus annuus HOM05D004724 ORTHO05D005734 3.3e-17 91.3 70 55.7
Os07g0599000 Oryza sativa ssp. japonica HOM05D004724 ORTHO05D005734 3.3e-17 91.3 68 61.8
DCAR_027465 Daucus carota HOM05D004724 ORTHO05D005734 4.3e-17 90.9 69 56.5
DCAR_027471 Daucus carota HOM05D004724 ORTHO05D005734 4.3e-17 90.9 69 56.5
AUR62003111 Chenopodium quinoa HOM05D004724 ORTHO05D005734 7.4e-17 90.1 69 62.3
Lj2g0005374 Lotus japonicus HOM05D004724 ORTHO05D005734 7.4e-17 90.1 70 55.7
Lsat_1_v5_gn_8_47681 Lactuca sativa HOM05D004724 ORTHO05D005734 9.7e-17 89.7 70 57.1
EL10Ac6g14982 Beta vulgaris HOM05D004724 ORTHO05D005734 1.3e-16 89.4 69 60.9
AUR62007926 Chenopodium quinoa HOM05D004724 ORTHO05D005734 1.3e-16 89.4 69 60.9
HPP92_009526 Vanilla planifolia HOM05D004724 ORTHO05D005734 1.3e-16 89.4 68 61.8
PSO017G2003 Papaver somniferum HOM05D004724 ORTHO05D005734 2.2e-16 88.6 68 57.4
PSO478G4140 Papaver somniferum HOM05D004724 ORTHO05D005734 2.2e-16 88.6 68 57.4
HPP92_009555 Vanilla planifolia HOM05D004724 ORTHO05D005734 6.3e-16 87.0 68 60.3
Hund25184 Selenicereus undatus HOM05D004724 ORTHO05D005734 1.4e-15 85.9 61 62.3
ATR0064G103 Amborella trichopoda HOM05D004724 ORTHO05D005734 3.1e-15 84.7 68 57.4
SEGI_03319 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 5.3e-15 84.0 68 55.9
Ah.02g126910 Amaranthus hybridus HOM05D004724 ORTHO05D005734 9.0e-15 83.2 65 61.5
ECA233G5398 Erigeron canadensis HOM05D004724 ORTHO05D005734 9.0e-15 83.2 69 55.1
Manes.01G028400 Manihot esculenta HOM05D004724 ORTHO05D005734 1.0e-13 79.7 69 53.6
CDE04G2698 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 2.2e-13 78.6 68 51.5
Potri.010G159100 Populus trichocarpa HOM05D004724 ORTHO05D005734 2.5e-12 75.1 63 54.0
CSS0008548 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 4.6e-11 70.9 51 58.8
Nitab4.5_0011966g0020 Nicotiana tabacum HOM05D004724 ORTHO05D005734 7.9e-11 70.1 57 56.1
SHI32882 Sapria himalayana HOM05D004724 ORTHO05D005734 1.0e-10 69.7 69 53.6
FAN07G2095 Fragaria x ananassa HOM05D004724 ORTHO05D005734 1.4e-10 69.3 59 52.5
CSS0003173 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.3e-10 68.6 68 48.5
CSS0040633 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.3e-10 68.6 68 50.0
CSS0037716 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.0e-10 68.2 68 48.5
CSS0031560 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.9e-10 67.8 68 50.0
Haze_11916 Corylus avellana HOM05D004724 ORTHO05D005734 3.9e-10 67.8 78 44.9
CDE07G0543 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 1.5e-09 65.9 45 64.4
CSS0030883 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.0e-09 65.5 68 47.1
FAN17G2607 Fragaria x ananassa HOM05D004724 ORTHO05D005734 2.0e-09 65.5 58 51.7
CSS0020440 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.5e-09 65.1 68 47.1
CSS0025326 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.5e-09 65.1 68 47.1
Mapoly0002s0313 Marchantia polymorpha HOM05D004724 ORTHO05D005734 2.5e-09 65.1 69 39.1
Dinv15029 Davidia involucrata HOM05D004724 ORTHO05D005734 7.4e-09 63.5 38 76.3
Dinv34076 Davidia involucrata HOM05D004724 ORTHO05D005734 7.4e-09 63.5 38 76.3
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 4.1e-07 57.8 51 54.9
AagrBONN_evm.TU.Sc2ySwM_117.2858 Anthoceros agrestis HOM05D004724 ORTHO05D005734 2.0e-06 55.5 50 48.0
Migut.L01196 Erythranthe guttata HOM05D004724 ORTHO05D005734 2.6e-06 55.1 37 64.9
Oeu048146.1 Olea europaea HOM05D004724 ORTHO05D005734 5.9e-06 53.9 37 62.2


User provided reference genes

Program Settings