Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 7.5e-65 250.4 126 100.0
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 2.3e-61 238.8 126 97.6
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 6.6e-61 237.3 126 95.2
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 1.5e-60 236.1 126 94.4
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 1.5e-60 236.1 126 94.4
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 5.2e-58 227.6 126 90.5
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 9.2e-55 216.9 126 88.1
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 6.2e-51 204.1 127 83.5
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 3.1e-50 201.8 129 82.2
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 7.5e-49 197.2 129 81.4
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 7.5e-49 197.2 129 81.4
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 5.4e-47 191.0 129 80.6
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 1.2e-46 189.9 129 79.8
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 3.5e-46 188.3 129 76.7
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 1.9e-44 182.6 128 74.2
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 4.3e-44 181.4 130 75.4
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 3.4e-41 171.8 130 71.5
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 2.7e-38 162.2 127 68.5
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 2.5e-36 155.6 126 64.3
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 6.4e-24 114.4 94 66.0
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 8.4e-24 114.0 99 61.6
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 1.4e-23 113.2 88 67.0
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 2.4e-23 112.5 90 63.3
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 5.4e-23 111.3 75 74.7
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 5.4e-23 111.3 106 59.4
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 7.1e-23 110.9 71 77.5
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 1.6e-22 109.8 99 57.6
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 2.1e-22 109.4 111 57.7
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 2.1e-22 109.4 131 50.4
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 2.1e-22 109.4 75 73.3
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 2.1e-22 109.4 77 72.7
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 2.1e-22 109.4 103 59.2
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 2.7e-22 109.0 99 60.6
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 2.7e-22 109.0 98 59.2
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 6.0e-22 107.8 99 56.6
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 6.0e-22 107.8 75 66.7
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 7.8e-22 107.5 83 61.4
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 1.0e-21 107.1 75 72.0
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 1.3e-21 106.7 71 74.6
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 2.3e-21 105.9 75 69.3
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 2.3e-21 105.9 75 70.7
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 3.0e-21 105.5 75 73.3
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 3.0e-21 105.5 74 71.6
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 3.9e-21 105.1 114 53.5
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 3.9e-21 105.1 71 73.2
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.9e-21 105.1 71 73.2
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.9e-21 105.1 71 73.2
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 3.9e-21 105.1 98 59.2
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 5.1e-21 104.8 75 68.0
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.1e-21 104.8 71 73.2
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.1e-21 104.8 71 73.2
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 5.1e-21 104.8 102 54.9
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 6.6e-21 104.4 125 48.8
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 1.1e-20 103.6 75 68.0
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 1.1e-20 103.6 117 48.7
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 1.1e-20 103.6 74 67.6
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 1.1e-20 103.6 74 67.6
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 1.1e-20 103.6 75 69.3
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 1.5e-20 103.2 119 53.8
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 1.5e-20 103.2 70 74.3
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 2.5e-20 102.4 79 64.6
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 3.3e-20 102.1 75 65.3
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 4.3e-20 101.7 99 54.5
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 5.6e-20 101.3 77 64.9
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 5.6e-20 101.3 71 73.2
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.3e-19 100.1 92 55.4
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.3e-19 100.1 75 66.7
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 1.3e-19 100.1 99 54.5
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 1.6e-19 99.8 75 69.3
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.6e-19 99.8 75 68.0
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 1.6e-19 99.8 75 66.7
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 2.1e-19 99.4 75 66.7
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 3.6e-19 98.6 97 56.7
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 3.6e-19 98.6 90 60.0
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 3.6e-19 98.6 75 66.7
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 3.6e-19 98.6 99 53.5
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 4.8e-19 98.2 99 50.5
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 6.2e-19 97.8 81 60.5
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 6.2e-19 97.8 75 65.3
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 8.1e-19 97.4 77 63.6
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 8.1e-19 97.4 109 50.5
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 8.1e-19 97.4 75 64.0
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 1.4e-18 96.7 128 43.8
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 1.8e-18 96.3 74 64.9
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 2.4e-18 95.9 75 62.7
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 3.1e-18 95.5 74 66.2
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 5.3e-18 94.7 87 59.8
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 6.9e-18 94.4 76 60.5
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 9.0e-18 94.0 76 61.8
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 9.0e-18 94.0 111 53.2
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 9.0e-18 94.0 76 61.8
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 2.0e-17 92.8 68 67.6
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 2.0e-17 92.8 104 48.1
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 3.4e-17 92.0 75 60.0
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 4.4e-17 91.7 82 58.5
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 4.4e-17 91.7 81 58.0
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 9.9e-17 90.5 75 57.3
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.3e-16 90.1 64 70.3
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 1.3e-16 90.1 64 70.3
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 1.3e-16 90.1 64 70.3
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 2.2e-16 89.4 102 48.0
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 2.9e-16 89.0 60 68.3
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 3.8e-16 88.6 67 64.2
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 4.9e-16 88.2 61 70.5
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 1.4e-15 86.7 75 54.7
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 1.9e-15 86.3 70 58.6
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 1.9e-15 86.3 72 61.1
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 1.2e-14 83.6 63 63.5
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 1.6e-14 83.2 64 62.5
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 2.1e-14 82.8 80 52.5
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 3.5e-14 82.0 74 52.7
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 4.3e-12 75.1 86 44.2
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 2.8e-11 72.4 88 42.0
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.4e-10 69.3 53 66.0
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 9.0e-10 67.4 61 60.7
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 1.7e-08 63.2 85 40.0
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 2.7e-06 55.8 43 55.8


User provided reference genes

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