Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.5e-98 362.8 188 100.0
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.5e-98 362.8 188 100.0
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 1.3e-84 316.6 194 88.1
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 3.7e-84 315.1 193 87.6
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 3.7e-84 315.1 194 88.7
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.1e-83 313.5 194 88.1
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 3.1e-75 285.4 200 81.5
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 2.0e-74 282.7 195 80.0
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.3e-73 280.0 200 79.5
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 4.0e-70 268.5 138 94.9
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 9.8e-69 263.8 138 94.9
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 3.7e-68 261.9 138 94.2
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.5e-61 240.0 213 69.5
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 3.4e-61 238.8 195 67.7
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 5.7e-61 238.0 139 83.5
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 7.0e-59 231.1 171 71.3
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 7.0e-59 231.1 127 88.2
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 9.2e-59 230.7 192 62.0
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 2.0e-58 229.6 127 87.4
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 2.0e-58 229.6 170 71.2
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 3.5e-58 228.8 139 80.6
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 3.5e-58 228.8 192 65.1
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 7.8e-58 227.6 139 79.1
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.0e-57 227.3 137 78.8
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.3e-57 226.9 127 87.4
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 1.7e-57 226.5 166 71.7
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.3e-57 226.1 142 76.8
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 2.9e-57 225.7 122 90.2
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 3.8e-57 225.3 197 64.5
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 3.8e-57 225.3 138 79.7
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 3.8e-57 225.3 171 67.8
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.0e-57 224.9 142 76.8
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 5.0e-57 224.9 198 63.1
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 8.6e-57 224.2 180 67.2
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 1.5e-56 223.4 142 76.1
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.9e-56 223.0 156 71.8
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.9e-56 223.0 130 83.1
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 3.3e-56 222.2 148 72.3
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 4.3e-56 221.9 168 69.6
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 4.3e-56 221.9 167 67.1
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 5.6e-56 221.5 193 63.7
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 5.6e-56 221.5 157 73.2
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 7.3e-56 221.1 148 71.6
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 7.3e-56 221.1 140 75.7
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 7.3e-56 221.1 142 76.1
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 9.5e-56 220.7 169 68.0
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 2.1e-55 219.5 166 69.9
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 2.8e-55 219.2 122 85.2
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 2.8e-55 219.2 174 65.5
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 3.6e-55 218.8 175 68.0
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 3.6e-55 218.8 174 69.0
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 3.6e-55 218.8 157 71.3
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 3.6e-55 218.8 122 84.4
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 4.7e-55 218.4 176 65.9
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 4.7e-55 218.4 148 70.3
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 4.7e-55 218.4 164 67.1
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 4.7e-55 218.4 150 72.7
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 6.1e-55 218.0 138 77.5
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 8.0e-55 217.6 122 85.2
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 8.0e-55 217.6 142 76.1
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 1.0e-54 217.2 127 82.7
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 1.4e-54 216.9 180 62.8
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 1.4e-54 216.9 168 66.7
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 1.4e-54 216.9 125 82.4
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.8e-54 216.5 123 83.7
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 1.8e-54 216.5 137 76.6
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 2.3e-54 216.1 167 68.3
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 3.0e-54 215.7 177 66.1
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 3.0e-54 215.7 184 65.8
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 4.0e-54 215.3 139 76.3
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 4.0e-54 215.3 135 77.0
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 4.0e-54 215.3 166 67.5
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 5.2e-54 214.9 165 67.9
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 6.8e-54 214.5 179 63.1
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 8.9e-54 214.2 130 80.0
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 8.9e-54 214.2 177 61.0
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 2.0e-53 213.0 117 86.3
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 4.4e-53 211.8 187 60.4
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 4.4e-53 211.8 199 58.3
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 5.7e-53 211.5 174 63.8
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 9.8e-53 210.7 121 81.8
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.3e-52 210.3 170 64.1
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 1.7e-52 209.9 181 63.5
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 2.9e-52 209.1 173 64.7
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.9e-52 208.4 138 71.0
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 1.8e-51 206.5 148 70.3
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 2.4e-51 206.1 125 78.4
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 4.1e-51 205.3 215 56.7
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 4.1e-51 205.3 175 60.0
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 7.8e-50 201.1 181 63.0
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 7.8e-50 201.1 189 55.0
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 3.0e-49 199.1 210 54.3
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 3.0e-49 199.1 124 75.0
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 1.1e-48 197.2 193 56.0
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 2.5e-48 196.1 174 58.0
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 3.4e-45 185.7 134 66.4
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 4.9e-44 181.8 163 60.1
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 2.0e-42 176.4 122 65.6
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 7.8e-42 174.5 122 67.2
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.7e-41 173.3 99 83.8
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.0e-41 171.8 122 64.8
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 7.3e-40 167.9 106 75.5
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 9.5e-40 167.5 122 63.9
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 2.1e-39 166.4 122 63.1
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 6.4e-36 154.8 127 66.9
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 2.5e-32 142.9 114 65.8
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.2e-31 140.6 130 58.5
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.2e-31 140.6 195 45.6
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.2e-28 129.8 98 65.3
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 1.6e-26 123.6 121 51.2
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 2.9e-20 102.8 126 45.2
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 3.2e-19 99.4 67 67.2
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 2.7e-18 96.3 71 64.8
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.5e-16 89.7 152 42.8
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 5.6e-16 88.6 45 91.1
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 5.3e-14 82.0 97 48.5
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 5.3e-14 82.0 97 48.5
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.0e-13 80.1 64 64.1
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.4e-13 79.3 64 62.5
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 6.4e-12 75.1 114 40.4
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 5.4e-11 72.0 37 86.5
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 9.0e-06 54.7 42 52.4


User provided reference genes

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