Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p10860 Brassica napus HOM05D004147 ORTHO05D018802 2.2e-67 258.8 134 100.0
A07p10870 Brassica napus HOM05D004147 ORTHO05D018802 2.2e-67 258.8 134 100.0
BraA07t28876Z Brassica rapa HOM05D004147 ORTHO05D018802 6.1e-65 250.8 133 98.5
A03p64860 Brassica napus HOM05D004147 ORTHO05D018802 1.8e-61 239.2 133 94.7
BraA03t15549Z Brassica rapa HOM05D004147 ORTHO05D018802 1.7e-46 189.5 104 95.2
BraA09t36212Z Brassica rapa HOM05D004147 ORTHO05D018802 1.7e-46 189.5 104 95.2
BraA05t19995Z Brassica rapa HOM05D004147 ORTHO05D018802 4.9e-46 188.0 106 93.4
C08p28370 Brassica napus HOM05D004147 ORTHO05D021856 9.8e-31 137.1 113 69.0
BolC5t32092H Brassica oleracea HOM05D004147 ORTHO05D018802 6.2e-25 117.9 101 68.3
C02p30750 Brassica napus HOM05D004147 ORTHO05D021856 2.2e-22 109.4 114 60.5
BolC8t50447H Brassica oleracea HOM05D004147 ORTHO05D021856 8.3e-22 107.5 132 53.0
C05p33620 Brassica napus HOM05D004147 ORTHO05D021856 5.1e-19 98.2 101 59.4
A09p35480 Brassica napus HOM05D000305 ORTHO05D000065 6.6e-19 97.8 133 48.9
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 1.9e-18 96.3 130 49.2
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-18 94.4 132 50.8
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 7.3e-18 94.4 132 50.8
A10p33690 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-17 92.8 130 47.7
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-17 92.4 130 47.7
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-17 91.3 131 48.1
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 6.2e-17 91.3 131 48.1
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-16 87.8 131 46.6
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-15 85.5 131 45.8
BolC7t45455H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-15 84.3 84 59.5
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 3.7e-14 82.0 76 63.2
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 3.7e-14 82.0 76 63.2
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 1.9e-13 79.7 129 45.7
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 5.4e-13 78.2 129 45.0
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-12 76.6 133 42.9
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-12 75.1 73 64.4
A06p21660 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-11 73.6 133 39.1
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-11 72.0 70 57.1
BcaC03g14692 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-10 69.7 73 56.2
BcaC04g22409 Brassica carinata HOM05D005044 ORTHO05D000065 1.9e-10 69.7 73 56.2
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-10 69.7 76 52.6
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-10 69.7 76 52.6
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-10 69.7 76 52.6
BolC9t54870H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-10 69.7 73 56.2
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 1.9e-10 69.7 76 52.6
BcaB07g33009 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-10 69.3 75 53.3
C06p26830 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-10 69.3 103 45.6
A09p30430 Brassica napus HOM05D000313 ORTHO05D013032 3.3e-10 68.9 122 43.4
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-10 68.6 74 52.7
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-10 67.8 73 52.1
BcaC04g18697 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-10 67.8 74 52.7
C05p32580 Brassica napus HOM05D000313 ORTHO05D041766 9.6e-10 67.4 58 63.8
BolC5t31991H Brassica oleracea HOM05D000313 ORTHO05D041766 9.6e-10 67.4 58 63.8
BcaB07g32488 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 66.6 72 54.2
BolC6t37857H Brassica oleracea HOM05D000313 ORTHO05D013032 1.6e-09 66.6 70 58.6
C07p49510 Brassica napus HOM05D000313 ORTHO05D013032 2.8e-09 65.9 63 60.3
BcaB05g24563 Brassica carinata HOM05D000313 ORTHO05D013032 4.7e-09 65.1 81 48.1
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 6.2e-09 64.7 74 50.0
C08p06840 Brassica napus HOM05D000280 ORTHO05D003998 6.2e-09 64.7 104 43.3
BolC8t47526H Brassica oleracea HOM05D000280 ORTHO05D003998 6.2e-09 64.7 104 43.3
BcaC01g02207 Brassica carinata HOM05D000313 ORTHO05D009979 1.4e-08 63.5 101 44.6
BcaB04g17642 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-08 62.4 74 51.4
BcaC02g10952 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-07 60.1 73 43.8
C04p23330 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-07 60.1 73 43.8
C09p19680 Brassica napus HOM05D000313 ORTHO05D013032 1.5e-07 60.1 64 56.2
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-07 60.1 74 48.6
A04p28790 Brassica napus HOM05D022358 ORTHO05D028328 2.6e-07 59.3 110 40.0
C04p53440 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-07 58.2 74 47.3
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-07 58.2 74 47.3
BolC6t36307H Brassica oleracea HOM05D000313 ORTHO05D021935 5.8e-07 58.2 61 52.5
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 7.6e-07 57.8 68 52.9
BolC4t25557H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-07 57.8 76 46.1
BolC5t31140H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-07 57.8 74 47.3
BraA08t32532Z Brassica rapa HOM05D004768 ORTHO05D005812 7.6e-07 57.8 74 44.6
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 7.6e-07 57.8 68 52.9
A09p51680 Brassica napus HOM05D000313 ORTHO05D013032 9.9e-07 57.4 76 44.7
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 9.9e-07 57.4 74 47.3
C04p39840 Brassica napus HOM05D000313 ORTHO05D013032 1.3e-06 57.0 76 46.1
BcaB02g06416 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-06 56.6 84 42.9
C08p04870 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 56.6 74 47.3
A08p05150 Brassica napus HOM05D004768 ORTHO05D005812 3.8e-06 55.5 74 43.2
C04p18760 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-06 55.5 66 51.5
BraA05t21747Z Brassica rapa HOM05D022358 ORTHO05D009979 3.8e-06 55.5 83 44.6


User provided reference genes

Program Settings