Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p10290 Brassica napus HOM05D021563 ORTHO05D027947 4.7e-55 217.6 109 100.0
A02p11550 Brassica napus HOM05D021563 ORTHO05D027947 5.1e-54 214.2 109 98.2
BraA07t28828Z Brassica rapa HOM05D021563 ORTHO05D027947 8.8e-54 213.4 109 98.2
C07p25320 Brassica napus HOM05D021563 ORTHO05D027947 1.5e-53 212.6 109 97.2
A08p30940 Brassica napus HOM05D021563 ORTHO05D003751 1.0e-41 173.3 87 98.9
A07p32490 Brassica napus HOM05D021563 ORTHO05D003751 1.5e-40 169.5 85 98.8
BraA01t04666Z Brassica rapa HOM05D003353 ORTHO05D003751 1.5e-16 89.7 92 62.0
Sp3g00610 Schrenkiella parvula HOM05D003353 ORTHO05D003751 7.3e-16 87.4 78 67.9
BcaB04g21418 Brassica carinata HOM05D003353 ORTHO05D003751 9.5e-16 87.0 92 60.9
Thhalv10019872m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 2.8e-15 85.5 92 60.9
BcaC09g47659 Brassica carinata HOM05D003353 ORTHO05D003751 6.1e-15 84.3 92 59.8
BolC1t05958H Brassica oleracea HOM05D003353 ORTHO05D003751 6.1e-15 84.3 92 59.8
CARHR075500 Cardamine hirsuta HOM05D003353 ORTHO05D003751 4.0e-14 81.6 79 67.1
Carub.0003s0064 Capsella rubella HOM05D003353 ORTHO05D003751 2.0e-13 79.3 95 56.8
A05p44550 Brassica napus HOM05D003353 ORTHO05D003751 4.4e-13 78.2 92 58.7
BraA05t23202Z Brassica rapa HOM05D003353 ORTHO05D003751 4.4e-13 78.2 92 58.7
AL3G10710 Arabidopsis lyrata HOM05D003353 ORTHO05D003751 7.5e-13 77.4 93 59.1
C09p75140 Brassica napus HOM05D003353 ORTHO05D003751 1.6e-10 69.7 91 57.1
BolC5t35150H Brassica oleracea HOM05D003353 ORTHO05D003751 1.6e-10 69.7 91 57.1
Aa31LG5G10560 Aethionema arabicum HOM05D003353 ORTHO05D003751 1.1e-08 63.5 91 44.0
Cpa.g.sc215.4 Carica papaya HOM05D003353 ORTHO05D003751 3.1e-06 55.5 89 41.6
ClCG10G014330 Citrullus lanatus HOM05D003353 ORTHO05D003751 5.2e-06 54.7 90 43.3
THA.LOC104822384 Tarenaya hassleriana HOM05D003353 ORTHO05D003751 6.8e-06 54.3 90 40.0


User provided reference genes

Program Settings