Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 1.9e-87 325.9 169 100.0
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 2.5e-87 325.5 169 99.4
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 7.1e-87 323.9 169 98.8
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 3.9e-85 318.2 169 97.0
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 3.9e-85 318.2 169 97.0
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 1.6e-83 312.8 169 95.3
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 2.2e-83 312.4 169 94.7
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 2.2e-83 312.4 169 94.7
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 4.8e-83 311.2 162 97.5
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.4e-82 309.7 169 93.5
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 1.8e-82 309.3 169 93.5
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 1.3e-80 303.1 169 91.7
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 8.2e-67 257.3 169 77.5
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 2.4e-66 255.8 151 86.1
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 2.9e-64 248.8 162 76.5
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 1.1e-63 246.9 161 77.0
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 1.1e-63 246.9 158 77.8
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.4e-63 246.5 163 75.5
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 1.4e-63 246.5 163 75.5
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 1.9e-63 246.1 158 77.8
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 2.5e-63 245.7 161 76.4
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 5.5e-63 244.6 160 76.2
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 7.2e-63 244.2 159 77.4
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 1.2e-62 243.4 160 76.2
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 1.2e-62 243.4 160 76.2
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 1.2e-62 243.4 159 77.4
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 1.2e-62 243.4 156 75.6
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 1.2e-62 243.4 156 75.6
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 1.6e-62 243.0 159 76.1
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 1.6e-62 243.0 162 75.3
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 2.7e-62 242.3 159 76.7
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 2.7e-62 242.3 156 76.9
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 2.7e-62 242.3 156 75.6
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 3.6e-62 241.9 158 75.3
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 3.6e-62 241.9 157 77.7
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 6.1e-62 241.1 163 73.0
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 1.0e-61 240.4 159 74.2
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 1.4e-61 240.0 161 74.5
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 1.4e-61 240.0 160 77.5
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 1.8e-61 239.6 160 73.8
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 2.3e-61 239.2 154 76.6
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 2.3e-61 239.2 161 74.5
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 2.3e-61 239.2 157 75.8
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 3.0e-61 238.8 157 72.6
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 3.9e-61 238.4 158 75.9
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 3.9e-61 238.4 154 77.3
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 5.2e-61 238.0 163 73.0
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 5.2e-61 238.0 158 75.3
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 6.7e-61 237.7 154 75.3
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 8.8e-61 237.3 166 72.3
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 8.8e-61 237.3 158 73.4
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 1.5e-60 236.5 158 74.7
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 1.5e-60 236.5 158 74.7
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 2.6e-60 235.7 158 74.7
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 4.4e-60 235.0 169 70.4
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 5.7e-60 234.6 160 73.8
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 5.7e-60 234.6 158 74.1
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 5.7e-60 234.6 163 73.0
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 9.7e-60 233.8 162 71.0
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 1.3e-59 233.4 157 73.9
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 1.3e-59 233.4 154 76.0
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.3e-59 233.4 160 72.5
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 1.7e-59 233.0 159 72.3
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 1.7e-59 233.0 154 77.3
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 2.8e-59 232.3 159 71.7
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 2.8e-59 232.3 164 72.6
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 4.8e-59 231.5 159 71.7
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 4.8e-59 231.5 160 72.5
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 4.8e-59 231.5 154 75.3
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 6.3e-59 231.1 159 71.7
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 1.1e-58 230.3 154 71.4
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 1.1e-58 230.3 159 73.0
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 1.1e-58 230.3 158 74.1
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 1.4e-58 229.9 157 73.9
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 1.8e-58 229.6 157 73.2
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 3.1e-58 228.8 158 74.1
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 3.1e-58 228.8 146 79.5
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 7.0e-58 227.6 150 75.3
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 1.2e-57 226.9 146 76.7
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 1.6e-57 226.5 151 74.8
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 4.5e-57 224.9 157 68.8
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 5.9e-57 224.6 152 73.7
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 5.9e-57 224.6 155 70.3
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 1.7e-56 223.0 151 73.5
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 1.7e-56 223.0 154 70.8
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 2.2e-56 222.6 146 74.7
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 2.9e-56 222.2 152 71.7
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 5.0e-56 221.5 156 68.6
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 2.5e-55 219.2 141 77.3
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.2e-54 216.9 160 70.0
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 1.6e-54 216.5 144 73.6
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 4.0e-53 211.8 178 61.8
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 6.7e-53 211.1 195 60.0
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 6.7e-53 211.1 166 65.7
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 6.3e-51 204.5 115 89.6
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 1.1e-50 203.8 177 61.6
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 1.3e-48 196.8 162 57.4
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 4.7e-46 188.3 168 59.5
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 9.1e-42 174.1 120 74.2
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 1.6e-41 173.3 169 53.3
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 2.9e-40 169.1 95 84.2
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 1.1e-39 167.2 94 83.0
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 2.5e-39 166.0 110 76.4
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 7.2e-39 164.5 159 52.2
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 1.4e-37 160.2 151 57.0
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 1.5e-36 156.8 163 54.0
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 2.6e-36 156.0 157 51.0
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 3.1e-34 149.1 154 51.3
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 2.0e-33 146.4 154 46.8
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 1.1e-31 140.6 261 39.1
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 2.4e-26 122.9 140 42.9
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 1.3e-24 117.1 88 69.3
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 8.3e-19 97.8 74 68.9
BcaB02g10054 Brassica carinata HOM05D006656 ORTHO05D008208 1.4e-18 97.1 64 73.4
BcaB06g27105 Brassica carinata HOM05D006656 ORTHO05D008208 1.6e-17 93.6 64 70.3
BolC2t11169H Brassica oleracea HOM05D006656 ORTHO05D008208 1.0e-16 90.9 55 80.0
BcaC09g51699 Brassica carinata HOM05D006656 ORTHO05D008208 3.0e-16 89.4 45 91.1
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis HOM05D006656 ORTHO05D008208 8.6e-16 87.8 93 52.7
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.8e-13 80.1 63 58.7
C05p47480 Brassica napus HOM05D006656 ORTHO05D008208 8.9e-13 77.8 37 97.3
C03p47720 Brassica napus HOM05D006656 ORTHO05D008208 5.8e-12 75.1 37 91.9
MCO04G243 Micromonas commoda HOM05D006656 ORTHO05D008208 1.2e-09 67.4 151 30.5
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 8.6e-08 61.2 49 65.3


User provided reference genes

Program Settings