Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p08860 Brassica napus HOM05D001877 ORTHO05D103298 3.7e-56 221.5 125 100.0
BcaB08g35098 Brassica carinata HOM05D001877 ORTHO05D001886 4.4e-17 91.7 127 51.2
BcaC02g08643 Brassica carinata HOM05D001877 ORTHO05D001886 8.3e-16 87.4 125 51.2
C04p51800 Brassica napus HOM05D001877 ORTHO05D001886 8.3e-16 87.4 125 51.2
BraA04t17335Z Brassica rapa HOM05D001877 ORTHO05D001886 2.1e-14 82.8 126 47.6
BraA09t41134Z Brassica rapa HOM05D001877 ORTHO05D001886 1.1e-12 77.0 56 78.6
THA.LOC104807669 Tarenaya hassleriana HOM05D001877 ORTHO05D001886 1.5e-12 76.6 126 42.9
A09p57420 Brassica napus HOM05D001877 ORTHO05D001886 4.3e-12 75.1 97 50.5
BolC8t51621H Brassica oleracea HOM05D001877 ORTHO05D001886 4.7e-11 71.6 87 52.9
Sopen11g005450 Solanum pennellii HOM05D001877 ORTHO05D001886 5.2e-10 68.2 128 36.7
Aa31LG7G14260 Aethionema arabicum HOM05D001877 ORTHO05D001886 2.0e-09 66.2 127 41.7
Cc07_g14070 Coffea canephora HOM05D001877 ORTHO05D001886 1.3e-08 63.5 111 36.0
Rhsim08G0016600 Rhododendron simsii HOM05D001877 ORTHO05D001886 1.7e-08 63.2 127 34.6
Sabra07G0008800 Salix brachista HOM05D001877 ORTHO05D001886 1.7e-08 63.2 132 34.8
vmacro18557 Vaccinium macrocarpon HOM05D001877 ORTHO05D001886 3.7e-08 62.0 127 34.6
THA.LOC104798693 Tarenaya hassleriana HOM05D001877 ORTHO05D001886 4.9e-08 61.6 116 37.9
Manes.12G126100 Manihot esculenta HOM05D001877 ORTHO05D001886 8.3e-08 60.8 131 35.9
SGA_v2.0_scaffold45G17232 Striga asiatica HOM05D001877 ORTHO05D001886 8.3e-08 60.8 115 40.0
Gohir.A02G144700 Gossypium hirsutum HOM05D001877 ORTHO05D001886 1.1e-07 60.5 113 35.4
Solyc11g010630.4 Solanum lycopersicum HOM05D001877 ORTHO05D001886 1.9e-07 59.7 128 34.4
Thecc.01G090200 Theobroma cacao HOM05D001877 ORTHO05D001886 2.4e-07 59.3 131 32.8
CANSAT35G1076 Cannabis sativa HOM05D001877 ORTHO05D001886 3.2e-07 58.9 115 35.7
Duzib187G0220 Durio zibethinus HOM05D001877 ORTHO05D001886 3.2e-07 58.9 131 32.8
Rhsim10G0173100 Rhododendron simsii HOM05D001877 ORTHO05D001886 3.2e-07 58.9 119 36.1
A04p17060 Brassica napus HOM05D001877 ORTHO05D001886 5.4e-07 58.2 125 38.4
CsaV3_3G006880 Cucumis sativus L. HOM05D001877 ORTHO05D001886 5.4e-07 58.2 129 33.3
QL06p035808 Quercus lobata HOM05D001877 ORTHO05D001886 5.4e-07 58.2 130 33.8
Actinidia06511 Actinidia chinensis HOM05D001877 ORTHO05D001886 7.1e-07 57.8 115 36.5
Manes.13G100200 Manihot esculenta HOM05D001877 ORTHO05D001886 7.1e-07 57.8 131 35.9
Ah.03g139940 Amaranthus hybridus HOM05D001877 ORTHO05D001886 9.2e-07 57.4 125 33.6
AUR62017975 Chenopodium quinoa HOM05D001877 ORTHO05D001886 9.2e-07 57.4 127 32.3
Gohir.D03G035900 Gossypium hirsutum HOM05D001877 ORTHO05D001886 9.2e-07 57.4 114 36.0
MELO3C016417.2 Cucumis melo HOM05D001877 ORTHO05D001886 1.2e-06 57.0 129 34.9
MSTRG.15686 Avicennia marina HOM05D001877 ORTHO05D001886 1.6e-06 56.6 120 37.5
CSS0007527 Camellia sinensis var. sinensis HOM05D001877 ORTHO05D001886 1.6e-06 56.6 132 31.8
CAN.G1344.17 Capsicum annuum HOM05D001877 ORTHO05D001886 1.6e-06 56.6 129 33.3
Duzib147G1366 Durio zibethinus HOM05D001877 ORTHO05D001886 2.1e-06 56.2 130 33.8
Migut.K00800 Erythranthe guttata HOM05D001877 ORTHO05D001886 2.1e-06 56.2 114 37.7
Gohir.D11G216200 Gossypium hirsutum HOM05D001877 ORTHO05D001886 2.1e-06 56.2 131 33.6
Gorai.007G232400 Gossypium raimondii HOM05D001877 ORTHO05D001886 2.1e-06 56.2 131 33.6
Nitab4.5_0011938g0020 Nicotiana tabacum HOM05D001877 ORTHO05D001886 2.1e-06 56.2 125 32.0
ClCG10G007750 Citrullus lanatus HOM05D001877 ORTHO05D001886 2.7e-06 55.8 128 33.6
Gorai.003G037600 Gossypium raimondii HOM05D001877 ORTHO05D001886 2.7e-06 55.8 114 35.1
AUR62003665 Chenopodium quinoa HOM05D001877 ORTHO05D001886 4.6e-06 55.1 127 32.3
Nitab4.5_0000128g0080 Nicotiana tabacum HOM05D001877 ORTHO05D001886 4.6e-06 55.1 125 29.6
Dinv36933 Davidia involucrata HOM05D001877 ORTHO05D001886 6.0e-06 54.7 125 34.4
Sp6g32930 Schrenkiella parvula HOM05D001877 ORTHO05D001886 6.0e-06 54.7 110 38.2
CAN.G712.6 Capsicum annuum HOM05D001877 ORTHO05D001886 7.8e-06 54.3 125 29.6


User provided reference genes

Program Settings