Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.1e-191 672.2 325 100.0
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 1.3e-185 652.9 325 96.9
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.1e-183 645.6 329 95.4
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 2.3e-182 642.1 329 95.1
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 2.3e-182 642.1 329 95.1
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 1.3e-169 599.7 330 90.6
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 8.4e-161 570.5 325 84.9
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 2.9e-153 545.4 330 82.1
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.1e-147 526.9 329 78.7
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 1.2e-146 523.5 326 77.6
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 3.6e-143 511.9 328 78.0
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.4e-115 420.2 334 65.0
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.5e-109 400.2 334 60.5
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 3.7e-108 395.6 334 59.3
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 4.9e-108 395.2 328 58.5
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 6.3e-108 394.8 334 58.7
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 2.4e-107 392.9 338 58.0
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 7.0e-107 391.3 268 73.9
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 2.9e-105 386.0 336 58.6
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 6.6e-105 384.8 336 57.7
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 5.6e-104 381.7 309 59.5
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 9.5e-104 380.9 323 58.2
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 9.5e-104 380.9 338 57.7
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 9.5e-104 380.9 335 56.1
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 4.7e-103 378.6 322 58.1
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.0e-102 377.5 333 55.3
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.4e-102 377.1 363 54.8
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.2e-101 374.0 335 57.6
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 1.5e-101 373.6 342 54.7
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 7.5e-101 371.3 335 57.0
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 7.5e-101 371.3 334 55.1
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 6.4e-100 368.2 330 54.5
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 8.3e-100 367.9 315 58.1
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 1.4e-99 367.1 337 54.9
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 2.4e-99 366.3 327 55.4
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 9.2e-99 364.4 337 56.1
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.2e-98 364.0 324 55.2
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 1.6e-98 363.6 325 56.0
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 3.5e-98 362.5 346 51.7
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 4.6e-98 362.1 323 54.2
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 7.8e-98 361.3 346 54.9
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 1.0e-97 360.9 258 64.0
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 1.3e-97 360.5 269 62.5
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.3e-97 360.5 271 62.0
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.3e-97 359.8 304 57.6
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 3.9e-97 359.0 389 51.4
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 3.9e-97 359.0 320 55.3
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 5.0e-97 358.6 331 55.3
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.5e-96 357.1 237 68.4
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 1.5e-96 357.1 334 53.3
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 5.6e-96 355.1 334 53.9
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 5.6e-96 355.1 270 60.7
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.2e-95 354.0 305 55.4
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 2.1e-95 353.2 261 62.5
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 6.8e-94 348.2 237 67.5
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.2e-93 347.4 348 52.6
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 1.2e-93 347.4 336 54.5
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 4.4e-93 345.5 285 64.2
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 9.8e-93 344.4 271 60.5
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 1.3e-92 344.0 306 54.2
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 1.7e-92 343.6 237 66.7
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 2.9e-92 342.8 330 52.4
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 4.9e-92 342.0 268 59.7
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 8.3e-92 341.3 340 52.6
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 5.4e-91 338.6 293 54.6
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 1.0e-89 334.3 429 44.8
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 1.3e-89 334.0 346 52.9
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 1.7e-89 333.6 339 52.8
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 3.0e-89 332.8 233 67.0
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.0e-89 332.8 336 53.6
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.5e-88 330.5 238 63.0
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 1.5e-88 330.5 288 56.6
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 2.5e-88 329.7 232 63.8
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 4.3e-88 328.9 258 58.1
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 7.3e-88 328.2 230 65.7
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.1e-87 326.6 280 57.9
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 2.3e-86 323.2 296 55.4
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 2.0e-85 320.1 336 52.4
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 4.1e-83 312.4 218 65.6
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.1e-83 312.4 361 48.2
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.1e-83 312.4 361 48.2
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 7.8e-82 308.1 328 48.2
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 3.9e-81 305.8 235 58.3
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.3e-80 302.8 223 63.7
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 5.2e-78 295.4 345 47.8
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 1.2e-77 294.3 329 48.3
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.4e-75 287.3 203 66.5
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 2.1e-74 283.5 195 64.1
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.3e-73 280.0 264 51.9
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 3.6e-71 272.7 199 62.3
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 8.1e-71 271.6 225 55.6
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 1.5e-69 267.3 333 45.0
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 7.6e-69 265.0 174 69.0
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 5.1e-65 252.3 272 48.9
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.1e-64 251.1 280 48.6
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.6e-63 247.3 224 50.9
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 2.1e-63 246.9 235 50.6
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 2.8e-63 246.5 221 52.9
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 4.5e-61 239.2 240 52.9
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 2.1e-58 230.3 257 49.0
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.0e-58 228.8 241 50.6
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 3.3e-56 223.0 229 50.2
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 9.6e-56 221.5 225 50.7
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 9.6e-48 194.9 242 43.4
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 5.0e-36 156.0 199 39.7
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.3e-33 147.1 110 62.7
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.3e-32 143.3 112 58.0
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.3e-32 142.9 110 61.8
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.6e-31 141.0 127 51.2
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 5.0e-28 129.4 102 59.8
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 1.7e-20 104.4 167 40.7
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 2.5e-11 73.9 218 31.7
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 6.1e-10 69.3 45 64.4
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 3.0e-09 67.0 49 65.3
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 8.8e-09 65.5 130 36.9
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 1.5e-08 64.7 141 34.0
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 2.0e-08 64.3 141 34.0
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 7.0e-06 55.8 67 34.3


User provided reference genes

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