Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p04170 Brassica napus HOM05D001371 ORTHO05D001319 6.2e-91 337.4 169 100.0
BolC6t39220H Brassica oleracea HOM05D001371 ORTHO05D001319 7.9e-78 293.9 209 75.6
BcaC02g12024 Brassica carinata HOM05D001371 ORTHO05D001319 1.3e-59 233.4 172 75.0
BcaC08g43256 Brassica carinata HOM05D001371 ORTHO05D001319 5.3e-58 228.0 195 66.2
C06p06020 Brassica napus HOM05D001371 ORTHO05D001319 5.3e-58 228.0 195 66.2
BolC6t35715H Brassica oleracea HOM05D001371 ORTHO05D001319 5.3e-58 228.0 195 66.2
A06p02860 Brassica napus HOM05D001371 ORTHO05D001319 2.0e-57 226.1 193 64.8
BraA06t23493Z Brassica rapa HOM05D001371 ORTHO05D001319 1.0e-56 223.8 193 64.2
C06p42050 Brassica napus HOM05D001371 ORTHO05D001319 1.2e-36 157.1 170 55.9
AT1G50830 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 5.6e-31 138.3 132 57.6
Thhalv10011263m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 1.2e-30 137.1 202 48.0
A09p30300 Brassica napus HOM05D001371 ORTHO05D001319 2.1e-30 136.3 150 59.3
BcaB07g33528 Brassica carinata HOM05D001371 ORTHO05D001319 1.8e-29 133.3 145 55.9
CARHR040870 Cardamine hirsuta HOM05D001371 ORTHO05D001319 8.9e-29 131.0 188 43.6
CARHR040880 Cardamine hirsuta HOM05D001371 ORTHO05D001319 7.5e-28 127.9 125 59.2
AT1G51538 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 4.6e-25 118.6 181 43.6
CARHR041470 Cardamine hirsuta HOM05D001371 ORTHO05D001319 3.9e-24 115.5 126 53.2
Aa31LG10G3280 Aethionema arabicum HOM05D001371 ORTHO05D001319 3.3e-23 112.5 119 52.9
BcaB07g33597 Brassica carinata HOM05D001371 ORTHO05D001319 2.3e-21 106.3 106 57.5
Thhalv10012017m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 6.8e-21 104.8 114 54.4
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 4.4e-20 102.1 129 49.6
C06p06660 Brassica napus HOM05D001371 ORTHO05D001319 1.3e-19 100.5 107 56.1
AT5G18510 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.2e-19 99.8 118 47.5
Aa31LG3G13050 Aethionema arabicum HOM05D001371 ORTHO05D001319 3.7e-19 99.0 121 51.2
BcaC08g43317 Brassica carinata HOM05D001371 ORTHO05D001319 3.7e-19 99.0 107 55.1
BolC6t35778H Brassica oleracea HOM05D001371 ORTHO05D001319 3.7e-19 99.0 107 55.1
A06p02450 Brassica napus HOM05D001371 ORTHO05D001319 4.9e-19 98.6 107 56.1
BraA06t23450Z Brassica rapa HOM05D001371 ORTHO05D001319 4.9e-19 98.6 107 56.1
Sp1g38170 Schrenkiella parvula HOM05D001371 ORTHO05D001319 1.1e-18 97.4 139 45.3
BraA09t38599Z Brassica rapa HOM05D000676 ORTHO05D003334 4.6e-17 92.0 47 95.7
BcaC08g46214 Brassica carinata HOM05D001371 ORTHO05D001319 3.0e-16 89.4 46 93.5
AT4G16050 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 8.6e-16 87.8 122 45.1
THA.LOC104817874 Tarenaya hassleriana HOM05D001371 ORTHO05D001319 8.6e-16 87.8 197 35.0
CARHR290670 Cardamine hirsuta HOM05D001371 ORTHO05D001319 1.5e-15 87.0 124 42.7
CARHR041690 Cardamine hirsuta HOM05D001371 ORTHO05D001319 1.9e-15 86.7 105 49.5
BcaB04g18353 Brassica carinata HOM05D001371 ORTHO05D001319 3.3e-15 85.9 192 35.4
Sp7g14520 Schrenkiella parvula HOM05D001371 ORTHO05D001319 1.8e-13 80.1 105 44.8
BcaC07g37948 Brassica carinata HOM05D001371 ORTHO05D001319 2.3e-13 79.7 127 42.5
AT1G50790 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 6.8e-13 78.2 105 43.8
BcaB07g33601 Brassica carinata HOM05D001371 ORTHO05D001319 1.5e-12 77.0 77 62.3
BcaB07g33603 Brassica carinata HOM05D001371 ORTHO05D001319 1.5e-12 77.0 77 62.3
Duzib132G0682 Durio zibethinus HOM05D001371 ORTHO05D001319 2.0e-12 76.6 137 38.7
A08p12460 Brassica napus HOM05D001371 ORTHO05D001319 2.6e-12 76.3 126 39.7
BraA08t33210Z Brassica rapa HOM05D001371 ORTHO05D001319 2.6e-12 76.3 126 39.7
Duzib052G0957 Durio zibethinus HOM05D001371 ORTHO05D001319 4.4e-12 75.5 137 37.2
A06p02800 Brassica napus HOM05D001371 ORTHO05D001319 5.8e-12 75.1 114 40.4
BraA06t23487Z Brassica rapa HOM05D001371 ORTHO05D001319 5.8e-12 75.1 114 40.4
Duzib248G0853 Durio zibethinus HOM05D001371 ORTHO05D001319 5.8e-12 75.1 137 37.2
AL1G58510 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 7.5e-12 74.7 97 44.3
Sp1g38180 Schrenkiella parvula HOM05D001371 ORTHO05D001319 9.9e-12 74.3 116 42.2
Gorai.005G249100 Gossypium raimondii HOM05D001371 ORTHO05D001319 1.3e-11 73.9 121 41.3
AT1G50770 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.9e-11 72.8 96 44.8
AT1G50750 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 6.4e-11 71.6 81 48.1
Rhsim06G0215500 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.1e-10 70.9 121 38.8
COL.COLO4_10613 Corchorus olitorius HOM05D001371 ORTHO05D001319 1.4e-10 70.5 139 36.0
AL6G29780 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 2.4e-10 69.7 56 66.1
CARHR041490 Cardamine hirsuta HOM05D001371 ORTHO05D001319 3.2e-10 69.3 105 41.0
AUR62015730 Chenopodium quinoa HOM05D001371 ORTHO05D001319 3.2e-10 69.3 123 38.2
Thhalv10027173m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 4.1e-10 68.9 119 41.2
Sabra16G0286500 Salix brachista HOM05D001371 ORTHO05D001319 4.1e-10 68.9 122 36.1
C06p06120 Brassica napus HOM05D001371 ORTHO05D001319 7.1e-10 68.2 119 37.8
CARHR040860 Cardamine hirsuta HOM05D001371 ORTHO05D001319 7.1e-10 68.2 104 41.3
AUR62020479 Chenopodium quinoa HOM05D001371 ORTHO05D001319 7.1e-10 68.2 123 38.2
Hma1.2p1_0673F.1_g201150 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 9.2e-10 67.8 128 33.6
Sabra16G0286400 Salix brachista HOM05D001371 ORTHO05D001319 1.2e-09 67.4 122 35.2
Thhalv10012297m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 1.6e-09 67.0 85 48.2
CSS0037215 Camellia sinensis var. sinensis HOM05D001371 ORTHO05D001319 2.1e-09 66.6 126 38.1
FvH4_3g22300 Fragaria vesca HOM05D001371 ORTHO05D001319 2.7e-09 66.2 120 40.0
Dinv22278 Davidia involucrata HOM05D001371 ORTHO05D001319 4.6e-09 65.5 131 32.8
Rhsim06G0215800 Rhododendron simsii HOM05D001371 ORTHO05D001319 4.6e-09 65.5 121 36.4
RcHm_v2.0_Chr5g0038471 Rosa chinensis HOM05D001371 ORTHO05D001319 6.0e-09 65.1 122 37.7
CANSAT56G1392 Cannabis sativa HOM05D001371 ORTHO05D001319 7.8e-09 64.7 122 34.4
CARHR041500 Cardamine hirsuta HOM05D001371 ORTHO05D001319 7.8e-09 64.7 96 39.6
Hma1.2p1_1222F.1_g268280 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 7.8e-09 64.7 128 32.8
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 7.8e-09 64.7 117 36.8
BolC6t35725H Brassica oleracea HOM05D001371 ORTHO05D001319 1.0e-08 64.3 96 40.6
Thhalv10012003m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 1.0e-08 64.3 59 52.5
Rhsim06G0215700 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.0e-08 64.3 125 32.0
Cc05_g05620 Coffea canephora HOM05D001371 ORTHO05D001319 1.3e-08 63.9 120 35.0
Duzib213G0856 Durio zibethinus HOM05D001371 ORTHO05D001319 1.3e-08 63.9 131 38.2
BolC3t21339H Brassica oleracea HOM05D001371 ORTHO05D001319 1.7e-08 63.5 81 45.7
AT1G50760 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.3e-08 63.2 48 60.4
AT1G50820 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.3e-08 63.2 96 39.6
vmacro21038 Vaccinium macrocarpon HOM05D001371 ORTHO05D001319 2.3e-08 63.2 119 33.6
HPP92_005289 Vanilla planifolia HOM05D001371 ORTHO05D001319 2.3e-08 63.2 123 31.7
BcaC01g01280 Brassica carinata HOM05D001371 ORTHO05D001319 3.0e-08 62.8 79 45.6
C03p90170 Brassica napus HOM05D001371 ORTHO05D001319 3.0e-08 62.8 79 45.6
Atru.chr2.2854 Acer truncatum HOM05D001371 ORTHO05D001319 3.9e-08 62.4 114 39.5
Ah.01g009220 Amaranthus hybridus HOM05D001371 ORTHO05D001319 3.9e-08 62.4 121 35.5
AUR62015727 Chenopodium quinoa HOM05D001371 ORTHO05D001319 3.9e-08 62.4 117 31.6
BcaC02g09119 Brassica carinata HOM05D001371 ORTHO05D001319 5.1e-08 62.0 49 59.2
BolC4t25441H Brassica oleracea HOM05D001371 ORTHO05D001319 5.1e-08 62.0 49 59.2
Gorai.002G087400 Gossypium raimondii HOM05D001371 ORTHO05D001319 5.1e-08 62.0 124 33.9
BcaB07g33606 Brassica carinata HOM05D001371 ORTHO05D001319 6.6e-08 61.6 84 41.7
C06p06680 Brassica napus HOM05D001371 ORTHO05D001319 1.1e-07 60.8 72 45.8
Rhsim06G0217900 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.1e-07 60.8 119 37.0
EL10Ac4g07860 Beta vulgaris HOM05D001371 ORTHO05D001319 1.5e-07 60.5 123 30.9
ECA236G3969 Erigeron canadensis HOM05D001371 ORTHO05D001319 1.5e-07 60.5 140 34.3
Peaxi162Scf00094g01121 Petunia axillaris HOM05D001371 ORTHO05D001319 1.5e-07 60.5 136 31.6
THA.LOC104798775 Tarenaya hassleriana HOM05D001371 ORTHO05D001319 1.9e-07 60.1 69 43.5
C04p38640 Brassica napus HOM05D001371 ORTHO05D014523 2.5e-07 59.7 49 57.1
QL08p011750 Quercus lobata HOM05D001371 ORTHO05D001319 2.5e-07 59.7 120 37.5
A06p02440 Brassica napus HOM05D001371 ORTHO05D001319 3.3e-07 59.3 64 45.3
CSS0038284 Camellia sinensis var. sinensis HOM05D001371 ORTHO05D001319 3.3e-07 59.3 104 38.5
RcHm_v2.0_Chr5g0038771 Rosa chinensis HOM05D001371 ORTHO05D001319 3.3e-07 59.3 121 36.4
Lj6g0016509 Lotus japonicus HOM05D001371 ORTHO05D001319 4.3e-07 58.9 121 33.1
MD03G1206300 Malus domestica HOM05D001371 ORTHO05D001319 4.3e-07 58.9 121 32.2
Prupe.4G209800 Prunus persica HOM05D001371 ORTHO05D001319 4.3e-07 58.9 125 35.2
Solyc07g064400.2 Solanum lycopersicum HOM05D001371 ORTHO05D001319 5.6e-07 58.5 127 34.6
Psat5g179960 Pisum sativum HOM05D001371 ORTHO05D001319 7.3e-07 58.2 121 32.2
BolC6t35780H Brassica oleracea HOM05D001371 ORTHO05D001319 9.5e-07 57.8 70 45.7
Eucgr.F03452 Eucalyptus grandis HOM05D001371 ORTHO05D001319 9.5e-07 57.8 118 30.5
Hma1.2p1_1222F.1_g268225 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 9.5e-07 57.8 117 34.2
QL08p011782 Quercus lobata HOM05D001371 ORTHO05D001319 9.5e-07 57.8 123 32.5
Peaxi162Scf00094g01122 Petunia axillaris HOM05D001371 ORTHO05D001319 2.1e-06 56.6 119 34.5
Rhsim06G0215600 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.1e-06 56.6 112 35.7
Sopen07g032600 Solanum pennellii HOM05D001371 ORTHO05D001319 2.1e-06 56.6 120 36.7
Migut.M01798 Erythranthe guttata HOM05D001371 ORTHO05D001319 2.8e-06 56.2 116 31.0
Sopen07g032530 Solanum pennellii HOM05D001371 ORTHO05D001319 2.8e-06 56.2 119 34.5
Lj1g0013444 Lotus japonicus HOM05D001371 ORTHO05D001319 3.6e-06 55.8 121 32.2
Sopen07g032580 Solanum pennellii HOM05D001371 ORTHO05D001319 3.6e-06 55.8 118 31.4
AUR62020481 Chenopodium quinoa HOM05D001371 ORTHO05D001319 4.7e-06 55.5 117 31.6
Psat5g186720 Pisum sativum HOM05D001371 ORTHO05D001319 4.7e-06 55.5 121 35.5
BcaB04g17060 Brassica carinata HOM05D001371 ORTHO05D001319 6.2e-06 55.1 39 64.1
Psat5g180000 Pisum sativum HOM05D001371 ORTHO05D001319 6.2e-06 55.1 99 37.4
C07p33770 Brassica napus HOM05D001371 ORTHO05D041042 8.1e-06 54.7 78 41.0
QL08p011743 Quercus lobata HOM05D001371 ORTHO05D001319 8.1e-06 54.7 120 34.2


User provided reference genes

Program Settings