Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p03780 Brassica napus HOM05D008820 ORTHO05D011139 3.6e-83 311.6 165 100.0
BraA07t28172Z Brassica rapa HOM05D008820 ORTHO05D011139 3.6e-83 311.6 165 100.0
BraA07t28170Z Brassica rapa HOM05D008820 ORTHO05D011139 3.0e-82 308.5 165 98.8
BraA07t28167Z Brassica rapa HOM05D008820 ORTHO05D011139 4.8e-80 301.2 167 97.0
C07p02790 Brassica napus HOM05D008820 ORTHO05D011139 1.0e-53 213.8 118 94.9
BcaB05g22617 Brassica carinata HOM05D008820 ORTHO05D011139 1.6e-43 179.9 110 87.3
Sp2g00990 Schrenkiella parvula HOM05D008820 ORTHO05D011139 3.6e-35 152.1 135 66.7
AL2G11560 Arabidopsis lyrata HOM05D008820 ORTHO05D011139 1.8e-34 149.8 141 65.2
Thhalv10023318m.g Eutrema salsugineum HOM05D008820 ORTHO05D011139 5.2e-34 148.3 139 63.3
AT1G63670 Arabidopsis thaliana HOM05D008820 ORTHO05D011139 5.8e-33 144.8 141 61.7
BraA09t37032Z Brassica rapa HOM05D008820 ORTHO05D011139 6.4e-32 141.4 141 62.4
BolC1t01253H Brassica oleracea HOM05D008820 ORTHO05D011139 1.9e-31 139.8 115 71.3
A09p13800 Brassica napus HOM05D008820 ORTHO05D011139 2.1e-30 136.3 135 63.0
Carub.0002s0118 Capsella rubella HOM05D008820 ORTHO05D011139 4.6e-30 135.2 142 57.7
CARHR047670 Cardamine hirsuta HOM05D008820 ORTHO05D011139 3.6e-27 125.6 135 57.0
BcaB07g31557 Brassica carinata HOM05D008820 ORTHO05D011139 4.9e-24 115.2 107 65.4
BcaC04g22692 Brassica carinata HOM05D008820 ORTHO05D011139 1.3e-21 107.1 128 58.6
C09p16490 Brassica napus HOM05D008820 ORTHO05D011139 1.3e-21 107.1 128 58.6
BolC9t54559H Brassica oleracea HOM05D008820 ORTHO05D011139 2.3e-21 106.3 134 56.7
C09p18650 Brassica napus HOM05D008820 ORTHO05D011139 2.4e-18 96.3 115 54.8
Aa31LG2G880 Aethionema arabicum HOM05D008820 ORTHO05D011139 3.1e-18 95.9 159 45.3
A09p15380 Brassica napus HOM05D008820 ORTHO05D011139 5.3e-18 95.1 115 54.8
BraA09t37180Z Brassica rapa HOM05D008820 ORTHO05D011139 5.3e-18 95.1 115 54.8
BcaNung06083 Brassica carinata HOM05D008820 ORTHO05D011139 1.3e-16 90.5 115 53.9
BolC9t54760H Brassica oleracea HOM05D008820 ORTHO05D011139 1.3e-16 90.5 115 53.9
BraA06t24331Z Brassica rapa HOM05D008820 ORTHO05D011139 5.5e-15 85.1 41 100.0
C01p12760 Brassica napus HOM05D008820 ORTHO05D011139 1.1e-12 77.4 43 83.7
C02p20010 Brassica napus HOM05D008820 ORTHO05D011139 1.1e-12 77.4 43 83.7
BolC3t20944H Brassica oleracea HOM05D008820 ORTHO05D011139 1.1e-12 77.4 43 83.7
BolC3t13724H Brassica oleracea HOM05D008820 ORTHO05D011139 5.6e-12 75.1 51 84.3
BolC3t16052H Brassica oleracea HOM05D008820 ORTHO05D011139 5.6e-12 75.1 43 81.4
BcaB01g01069 Brassica carinata HOM05D001045 ORTHO05D001542 7.4e-12 74.7 43 83.7
THA.LOC104817974 Tarenaya hassleriana HOM05D008820 ORTHO05D011139 2.8e-11 72.8 154 38.3
BcaC03g16726 Brassica carinata HOM05D000519 ORTHO05D001210 1.1e-10 70.9 67 61.2
A01p14790 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-10 70.9 43 81.4
C02p45900 Brassica napus HOM05D000519 ORTHO05D001210 1.1e-10 70.9 44 79.5
BraA01t01420Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-10 70.9 43 81.4
BcaB04g18133 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-10 70.5 43 81.4
BcaB02g09918 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-10 69.7 43 79.1
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-10 69.7 43 79.1
BcaB06g28787 Brassica carinata HOM05D000084 ORTHO05D000065 3.1e-10 69.3 43 81.4
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 6.9e-10 68.2 43 76.7
C02p44680 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-10 68.2 43 76.7
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-09 67.0 52 67.3
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-09 67.0 43 76.7
BraA08t34047Z Brassica rapa HOM05D000313 ORTHO05D018581 2.0e-09 66.6 43 76.7
THA.LOC104823587 Tarenaya hassleriana HOM05D008820 ORTHO05D011139 2.0e-09 66.6 171 34.5
BcaB05g22616 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-09 66.2 42 78.6
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-09 66.2 43 74.4
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-09 66.2 43 74.4
C02p49500 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-09 66.2 43 74.4
C04p40410 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-09 66.2 43 74.4
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-09 65.5 42 73.8
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-09 65.5 42 73.8
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-09 65.5 42 73.8
BolC4t25760H Brassica oleracea HOM05D000467 ORTHO05D014507 4.5e-09 65.5 43 74.4
BcaB06g27552 Brassica carinata HOM05D000313 ORTHO05D018581 7.6e-09 64.7 43 74.4
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-09 64.7 43 72.1
BraA05t20928Z Brassica rapa HOM05D000313 ORTHO05D000065 7.6e-09 64.7 43 74.4
BcaB04g20318 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-08 63.9 43 69.8
C02p44290 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-08 63.9 64 51.6
C04p41780 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-08 63.9 43 72.1
C02p49550 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 63.5 42 71.4
A06p27140 Brassica napus HOM05D000313 ORTHO05D015005 2.2e-08 63.2 43 74.4
BcaB03g15004 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-08 62.0 43 65.1
BraA06t25650Z Brassica rapa HOM05D001916 ORTHO05D015005 6.5e-08 61.6 43 72.1
BolC9t57904H Brassica oleracea HOM05D000313 ORTHO05D021773 8.4e-08 61.2 43 69.8
C08p08660 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.8 42 73.8
BcaB08g34753 Brassica carinata HOM05D000313 ORTHO05D018581 1.4e-07 60.5 43 69.8
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.7 43 62.8
BcaC07g37395 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.7 42 73.8
C02p24380 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-07 59.7 42 64.3
BcaB01g04375 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-07 58.9 119 37.0
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-07 58.9 43 62.8
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-07 58.5 43 58.1
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 5.5e-07 58.5 43 58.1
BolC3t19432H Brassica oleracea HOM05D027285 ORTHO05D027346 5.5e-07 58.5 42 64.3
BcaC02g10599 Brassica carinata HOM05D010357 ORTHO05D015494 7.1e-07 58.2 43 62.8
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-07 58.2 43 62.8
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 7.1e-07 58.2 40 67.5
C04p25640 Brassica napus HOM05D010357 ORTHO05D015494 7.1e-07 58.2 43 62.8
C05p50910 Brassica napus HOM05D010357 ORTHO05D015494 7.1e-07 58.2 43 62.8
BolC2t10974H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-07 58.2 40 67.5
BolC3t17676H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-07 58.2 43 58.1
BolC4t24245H Brassica oleracea HOM05D010357 ORTHO05D015494 7.1e-07 58.2 43 62.8
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-07 58.2 43 62.8
BcaB02g09369 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-07 57.8 42 59.5
BcaB06g27821 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-07 57.8 42 59.5
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-07 57.8 40 70.0
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-07 57.8 43 62.8
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 9.3e-07 57.8 40 70.0
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-06 57.4 43 65.1
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 57.4 43 65.1
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 57.4 43 65.1
BcaB06g28913 Brassica carinata HOM05D000313 ORTHO05D021773 1.6e-06 57.0 43 67.4
BcaC02g08765 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 42 57.1
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 43 60.5
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 42 57.1
BcaC08g44117 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 40 70.0
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 42 57.1
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 57.0 40 70.0
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 57.0 42 57.1
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-06 57.0 42 57.1
BolC5t33765H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-06 57.0 42 57.1
BraA06t25243Z Brassica rapa HOM05D010357 ORTHO05D000065 1.6e-06 57.0 42 61.9
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-06 57.0 40 70.0
BcaC03g14829 Brassica carinata HOM05D000313 ORTHO05D024250 2.1e-06 56.6 40 65.0
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-06 56.6 43 55.8
C07p20830 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-06 56.6 40 65.0
BcaB02g11204 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-06 56.2 71 46.5
BcaB02g11419 Brassica carinata HOM05D000313 ORTHO05D001242 2.7e-06 56.2 71 46.5
BcaB07g33660 Brassica carinata HOM05D000313 ORTHO05D001242 2.7e-06 56.2 67 47.8
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-06 56.2 40 65.0
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-06 56.2 40 70.0
BcaC09g48632 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-06 56.2 43 67.4
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-06 56.2 40 67.5
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-06 56.2 40 67.5
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-06 56.2 40 70.0
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-06 55.8 40 67.5
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-06 55.8 40 67.5
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-06 55.8 40 67.5
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-06 55.8 40 67.5
BraA05t19528Z Brassica rapa HOM05D000077 ORTHO05D033218 3.5e-06 55.8 66 47.0
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-06 55.5 40 65.0
BcaB04g17760 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-06 55.5 43 65.1
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-06 55.5 40 67.5
BcaC07g39596 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-06 55.5 43 55.8
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-06 55.5 40 67.5
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-06 55.5 40 67.5
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-06 55.5 40 67.5
BcaB04g17856 Brassica carinata HOM05D000313 ORTHO05D000065 6.0e-06 55.1 40 65.0
BcaC03g16977 Brassica carinata HOM05D000313 ORTHO05D000065 6.0e-06 55.1 49 53.1
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 40 62.5
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 42 54.8
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 40 62.5
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 37 67.6
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 37 67.6
C04p23670 Brassica napus HOM05D000313 ORTHO05D021773 6.0e-06 55.1 49 59.2
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 40 62.5
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 40 67.5
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 6.0e-06 55.1 37 67.6
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 6.0e-06 55.1 40 67.5
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 6.0e-06 55.1 42 54.8
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 6.0e-06 55.1 40 62.5
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-06 54.7 42 54.8
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-06 54.7 42 54.8
BcaC03g16226 Brassica carinata HOM05D003545 ORTHO05D011382 7.9e-06 54.7 40 65.0
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-06 54.7 36 69.4
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 7.9e-06 54.7 36 69.4
BolC2t10031H Brassica oleracea HOM05D003545 ORTHO05D011382 7.9e-06 54.7 40 65.0
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 7.9e-06 54.7 40 65.0


User provided reference genes

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