Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p03550 Brassica napus HOM05D000675 ORTHO05D033415 1.6e-48 195.7 95 100.0
C08p18220 Brassica napus HOM05D000675 ORTHO05D033415 9.7e-41 169.9 94 89.4
BolC8t49457H Brassica oleracea HOM05D000675 ORTHO05D033415 3.1e-31 138.3 77 89.6
BcaC09g49238 Brassica carinata HOM05D000675 ORTHO05D020104 2.9e-21 105.1 61 83.6
C04p10840 Brassica napus HOM05D000675 ORTHO05D000395 2.9e-21 105.1 60 83.3
C06p33690 Brassica napus HOM05D000675 ORTHO05D000395 6.1e-19 97.4 61 73.8
C05p33310 Brassica napus HOM05D000675 ORTHO05D000395 8.0e-19 97.1 56 82.1
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 8.0e-19 97.1 56 82.1
C03p35030 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-18 96.7 56 82.1
A08p06340 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-18 96.3 56 80.4
BraA07t28421Z Brassica rapa HOM05D000675 ORTHO05D000395 2.3e-18 95.5 67 73.1
A02p08880 Brassica napus HOM05D000675 ORTHO05D013243 2.6e-17 92.0 56 78.6
BraA02t05957Z Brassica rapa HOM05D000675 ORTHO05D013243 2.6e-17 92.0 56 78.6
BolC8t48443H Brassica oleracea HOM05D000675 ORTHO05D013243 5.7e-17 90.9 60 71.7
BcaC07g38048 Brassica carinata HOM05D000675 ORTHO05D013243 1.7e-16 89.4 60 70.0
BolC5t30569H Brassica oleracea HOM05D000675 ORTHO05D105657 3.7e-16 88.2 49 87.8
BcaC04g21549 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-15 85.1 60 68.3
BcaC05g26973 Brassica carinata HOM05D000675 ORTHO05D013243 3.5e-14 81.6 60 66.7
C07p04710 Brassica napus HOM05D000675 ORTHO05D000395 7.7e-14 80.5 60 63.3
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 3.8e-13 78.2 60 61.7
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 1.1e-12 76.6 55 65.5
C05p28300 Brassica napus HOM05D000675 ORTHO05D013243 1.5e-12 76.3 56 66.1
A01p22890 Brassica napus HOM05D000675 ORTHO05D013243 1.9e-12 75.9 56 64.3
A06p35690 Brassica napus HOM05D000675 ORTHO05D033165 4.2e-12 74.7 39 87.2
A10p17730 Brassica napus HOM05D000675 ORTHO05D033165 4.2e-12 74.7 39 87.2
BcaC07g37751 Brassica carinata HOM05D000675 ORTHO05D000395 5.5e-12 74.3 55 63.6
BraA10t42847Z Brassica rapa HOM05D000675 ORTHO05D013243 9.5e-12 73.6 39 84.6
BraA05t20960Z Brassica rapa HOM05D000675 ORTHO05D033165 1.2e-11 73.2 39 84.6
BraA07t28911Z Brassica rapa HOM05D000675 ORTHO05D000395 2.1e-11 72.4 63 55.6
A02p27950 Brassica napus HOM05D000675 ORTHO05D013243 2.8e-11 72.0 49 69.4
BcaC05g26837 Brassica carinata HOM05D000675 ORTHO05D019849 3.6e-11 71.6 60 63.3
BolC5t31432H Brassica oleracea HOM05D000675 ORTHO05D019849 3.6e-11 71.6 60 63.3
BolC9t57807H Brassica oleracea HOM05D000675 ORTHO05D013243 4.7e-11 71.2 58 56.9
A01p35410 Brassica napus HOM05D000675 ORTHO05D013243 8.0e-11 70.5 49 67.3
A06p28200 Brassica napus HOM05D000675 ORTHO05D013243 8.0e-11 70.5 49 67.3
A07p36210 Brassica napus HOM05D000675 ORTHO05D013243 1.8e-10 69.3 53 60.4
A08p11640 Brassica napus HOM05D000675 ORTHO05D013243 1.8e-10 69.3 53 60.4
BcaC08g43526 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-10 68.9 55 60.0
BolC6t35994H Brassica oleracea HOM05D000675 ORTHO05D000395 2.3e-10 68.9 55 60.0
A05p17400 Brassica napus HOM05D000675 ORTHO05D019849 4.0e-10 68.2 60 60.0
BraA06t25677Z Brassica rapa HOM05D000675 ORTHO05D019849 4.0e-10 68.2 60 60.0
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-09 66.6 49 63.3
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 2.6e-09 65.5 65 50.8
BolC3t14487H Brassica oleracea HOM05D018291 ORTHO05D019888 2.6e-09 65.5 65 55.4
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 2.6e-09 65.5 65 50.8
C04p15800 Brassica napus HOM05D000675 ORTHO05D000395 4.4e-09 64.7 57 56.1
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 5.7e-09 64.3 49 57.1
BcaC02g11419 Brassica carinata HOM05D000675 ORTHO05D013243 5.7e-09 64.3 47 63.8
BraA06t26493Z Brassica rapa HOM05D000675 ORTHO05D108033 5.7e-09 64.3 30 96.7
BolC4t23150H Brassica oleracea HOM05D000675 ORTHO05D000395 7.5e-09 63.9 57 56.1
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 9.8e-09 63.5 49 57.1
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 9.8e-09 63.5 57 54.4
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 9.8e-09 63.5 57 54.4
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-08 63.2 57 52.6
BcaC09g49047 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-08 63.2 57 56.1
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 1.3e-08 63.2 57 56.1
BraA08t32511Z Brassica rapa HOM05D000675 ORTHO05D041170 1.3e-08 63.2 44 65.9
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-08 62.8 49 55.1
A08p04840 Brassica napus HOM05D000675 ORTHO05D041170 2.2e-08 62.4 44 63.6
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-08 62.0 49 55.1
A03p64600 Brassica napus HOM05D000675 ORTHO05D013243 3.7e-08 61.6 46 60.9
BraA03t15526Z Brassica rapa HOM05D000675 ORTHO05D013243 3.7e-08 61.6 46 60.9
C02p39190 Brassica napus HOM05D000675 ORTHO05D000395 4.9e-08 61.2 53 58.5
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 4.9e-08 61.2 53 58.5
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 6.3e-08 60.8 49 57.1
BcaB01g01443 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-08 60.5 50 60.0
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-08 60.5 56 57.1
BcaB04g17681 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-07 59.7 49 57.1
A08p09110 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-07 59.7 50 52.0
C06p35350 Brassica napus HOM05D000675 ORTHO05D019849 1.4e-07 59.7 54 57.4
AT1G36970 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 1.8e-07 59.3 49 57.1
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-07 58.9 54 50.0
BcaC09g50290 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-07 58.5 49 53.1
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 3.1e-07 58.5 49 53.1
C01p26930 Brassica napus HOM05D000675 ORTHO05D000395 3.1e-07 58.5 49 53.1
BolC1t02639H Brassica oleracea HOM05D000675 ORTHO05D000395 3.1e-07 58.5 49 53.1
BolC5t30408H Brassica oleracea HOM05D000675 ORTHO05D000395 3.1e-07 58.5 57 56.1
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 3.1e-07 58.5 49 53.1
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 4.1e-07 58.2 53 56.6
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 4.1e-07 58.2 53 56.6
CARHR283870 Cardamine hirsuta HOM05D000675 ORTHO05D000395 4.1e-07 58.2 49 55.1
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 7.0e-07 57.4 65 41.5
BcaC01g01855 Brassica carinata HOM05D000675 ORTHO05D000395 9.2e-07 57.0 49 57.1
BcaC05g25771 Brassica carinata HOM05D000675 ORTHO05D021848 1.2e-06 56.6 62 51.6
C05p17010 Brassica napus HOM05D000675 ORTHO05D000395 1.2e-06 56.6 62 51.6
BraA09t41505Z Brassica rapa HOM05D018291 ORTHO05D019888 1.2e-06 56.6 64 45.3
BcaB06g25600 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-06 55.8 55 49.1
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 2.7e-06 55.5 49 51.0
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 2.7e-06 55.5 49 51.0
BcaC06g34976 Brassica carinata HOM05D000675 ORTHO05D000395 3.5e-06 55.1 60 51.7
BolC7t42635H Brassica oleracea HOM05D000675 ORTHO05D000395 3.5e-06 55.1 60 51.7
BcaB04g18177 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-06 54.7 49 49.0
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-06 54.7 49 49.0
C01p14780 Brassica napus HOM05D000675 ORTHO05D000395 4.5e-06 54.7 49 49.0
C03p78160 Brassica napus HOM05D000675 ORTHO05D000395 4.5e-06 54.7 49 51.0
BolC8t48427H Brassica oleracea HOM05D000675 ORTHO05D000395 4.5e-06 54.7 53 50.9
C06p37640 Brassica napus HOM05D000675 ORTHO05D000395 5.9e-06 54.3 77 42.9
BolC4t25530H Brassica oleracea HOM05D000675 ORTHO05D000395 5.9e-06 54.3 50 48.0
BolC7t40834H Brassica oleracea HOM05D000675 ORTHO05D000395 5.9e-06 54.3 49 49.0
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 5.9e-06 54.3 74 40.5
A10p08730 Brassica napus HOM05D000675 ORTHO05D019849 7.8e-06 53.9 52 57.7


User provided reference genes

Program Settings